| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is 160876834
Identifier: 160876834
GI number: 160876834
Start: 4397269
End: 4398141
Strand: Reverse
Name: 160876834
Synonym: Sbal195_3730
Alternate gene names: NA
Gene position: 4398141-4397269 (Counterclockwise)
Preceding gene: 160876835
Following gene: 160876833
Centisome position: 82.25
GC content: 47.19
Gene sequence:
>873_bases ATGTGGATCTTACTAACTTTGCTGGCGGCATTTATGCAGGCTTGGCGTAATGCGTTTCAAAGCCAACTGAGTGAAGAGGT GAGTGTCGCGGGCGTGACCTTAGCGCGTTTTATTTGGGCTGGGCCCATTGCCGCCGTGTATCTGGTAGGTTTATATCTTT GGCAGGATGTCGGTATCCCCGATTTTAGCGGCCGTTTTATCGTTTTTATCTTAGGTGCATCGGCGATGCAAATCCTAGCA ACTGGTTTGATGGTGAAACTGTTTAAGCAACAGAATTTTGCCATTGGGGCTGGGCTGGCTAAGAGTGAAGCTGTGGTTGC GGCGATATTAGGCACAGTGTTTTTTGGCACTCATTTATCACCATTAGGTTGGTCGGGTGTATTACTGGGTGGTGTGGCGA TTTTTCTGTTGAGTGCCAAACAAGGTCTTCGCAGTCTGTCGCTCAATACGGTATTGATTGGTTTAGCCTGTGGAACTTCG TTTGCGCTGACATCGCTCTGGGTGCGGGAGGCGAGTTTGTGTTTGAATATCGGTTTCCCCCATAGCGCCGCTTGGGTGCT GTTATTCGTGATTAGTCTACAGACCTTAGTGTTAGTCAGTTATCTGTTACTTAAGGATAAATCCACACTGGCCGCGTTAT GGCGGCGACCTAAGCTTACCTTACTCACCAGTACCGCCAGTTGTTTAGGTTCTATCGGCTGGTTTAGTGCTATGTCGCTG CAGGCTGTGCCTTATGTTAAAACCTTAGGCCAAGTTGAAGTCTTCTTTATGATCTTGATTGCCACCTTTTGGCTGAAGGA AAAAGTGAAGATAAAAGATATGCTTGGATTAGTGCTTATCGCTATCGCCGCTATTTTGGTGATGTGGGAATAG
Upstream 100 bases:
>100_bases TGGCTATAACCCTGTAGCTATCTGAAACATGAATGTTTTATGATGAGGTTTGCCTAACCCTTGTCTTTATTGCCGACCTC ATTCTTTACGGAATACCTTC
Downstream 100 bases:
>100_bases TTTCAAACTCATTGATACCATGTCGATTTTTTATACTAGAATAAAATGCGATTTAGCCTGTTTATATCAAGCTGACATGA ACTGAGATACAAACATATAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MWILLTLLAAFMQAWRNAFQSQLSEEVSVAGVTLARFIWAGPIAAVYLVGLYLWQDVGIPDFSGRFIVFILGASAMQILA TGLMVKLFKQQNFAIGAGLAKSEAVVAAILGTVFFGTHLSPLGWSGVLLGGVAIFLLSAKQGLRSLSLNTVLIGLACGTS FALTSLWVREASLCLNIGFPHSAAWVLLFVISLQTLVLVSYLLLKDKSTLAALWRRPKLTLLTSTASCLGSIGWFSAMSL QAVPYVKTLGQVEVFFMILIATFWLKEKVKIKDMLGLVLIAIAAILVMWE
Sequences:
>Translated_290_residues MWILLTLLAAFMQAWRNAFQSQLSEEVSVAGVTLARFIWAGPIAAVYLVGLYLWQDVGIPDFSGRFIVFILGASAMQILA TGLMVKLFKQQNFAIGAGLAKSEAVVAAILGTVFFGTHLSPLGWSGVLLGGVAIFLLSAKQGLRSLSLNTVLIGLACGTS FALTSLWVREASLCLNIGFPHSAAWVLLFVISLQTLVLVSYLLLKDKSTLAALWRRPKLTLLTSTASCLGSIGWFSAMSL QAVPYVKTLGQVEVFFMILIATFWLKEKVKIKDMLGLVLIAIAAILVMWE >Mature_290_residues MWILLTLLAAFMQAWRNAFQSQLSEEVSVAGVTLARFIWAGPIAAVYLVGLYLWQDVGIPDFSGRFIVFILGASAMQILA TGLMVKLFKQQNFAIGAGLAKSEAVVAAILGTVFFGTHLSPLGWSGVLLGGVAIFLLSAKQGLRSLSLNTVLIGLACGTS FALTSLWVREASLCLNIGFPHSAAWVLLFVISLQTLVLVSYLLLKDKSTLAALWRRPKLTLLTSTASCLGSIGWFSAMSL QAVPYVKTLGQVEVFFMILIATFWLKEKVKIKDMLGLVLIAIAAILVMWE
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31419; Mature: 31419
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWILLTLLAAFMQAWRNAFQSQLSEEVSVAGVTLARFIWAGPIAAVYLVGLYLWQDVGIP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DFSGRFIVFILGASAMQILATGLMVKLFKQQNFAIGAGLAKSEAVVAAILGTVFFGTHLS CCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHCCCC PLGWSGVLLGGVAIFLLSAKQGLRSLSLNTVLIGLACGTSFALTSLWVREASLCLNIGFP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHCCCHHHHHHHHHHHHHHEEECCCC HSAAWVLLFVISLQTLVLVSYLLLKDKSTLAALWRRPKLTLLTSTASCLGSIGWFSAMSL CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHH QAVPYVKTLGQVEVFFMILIATFWLKEKVKIKDMLGLVLIAIAAILVMWE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MWILLTLLAAFMQAWRNAFQSQLSEEVSVAGVTLARFIWAGPIAAVYLVGLYLWQDVGIP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DFSGRFIVFILGASAMQILATGLMVKLFKQQNFAIGAGLAKSEAVVAAILGTVFFGTHLS CCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHCCCC PLGWSGVLLGGVAIFLLSAKQGLRSLSLNTVLIGLACGTSFALTSLWVREASLCLNIGFP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHCCCHHHHHHHHHHHHHHEEECCCC HSAAWVLLFVISLQTLVLVSYLLLKDKSTLAALWRRPKLTLLTSTASCLGSIGWFSAMSL CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHH QAVPYVKTLGQVEVFFMILIATFWLKEKVKIKDMLGLVLIAIAAILVMWE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA