| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yjqA [H]
Identifier: 160876808
GI number: 160876808
Start: 4370400
End: 4370774
Strand: Reverse
Name: yjqA [H]
Synonym: Sbal195_3704
Alternate gene names: 160876808
Gene position: 4370774-4370400 (Counterclockwise)
Preceding gene: 160876809
Following gene: 160876806
Centisome position: 81.74
GC content: 41.87
Gene sequence:
>375_bases ATGGGATTGTTAGACGGTTTACTCGGTAATGCTTCTGAGGTTGATTTACAGGAATTGGCCGAGGAATTAAGGCCTATCAT GGGCATTCAAGAAGAATTAAAACTCGCCTACAAAGTGATCCGCGATTTATTTATTTTCACCAATAAACGTCTGATCTTAA TTGATAAGCAGGGGCTTACTGGCAAGAAGGTTACTTACCATTCCATACCGTATAAATCCATTACCCATTTTGAAGTGGAA ACCACAGGCCATTTTGATATGGATGCCGAGCTCAAAATCTGGATCTCAGGCCAGAGTGAGCCTTTAGTAAAAGAGCTTAA ACGTGGCACGGATGTTGTCGGTATTCAAAAGACCATCGCCACTTTTGCGCTTTAG
Upstream 100 bases:
>100_bases ACCATAGCTACTCCCATATTTTCATCAAAGCCCGATATTGCACATGCGACGATCAGCGGATATCTTATTGAAAATAATAT TAATAATAAGGGATATTAAA
Downstream 100 bases:
>100_bases TTTTTAGTCTTGCGACTAGATTTCCATTACTTCTATCGAGCTGGCGATTAAGGTAAGTAAGACAAATAAGGTAAGCCAAG TTAAATCAGGGCTTACCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MGLLDGLLGNASEVDLQELAEELRPIMGIQEELKLAYKVIRDLFIFTNKRLILIDKQGLTGKKVTYHSIPYKSITHFEVE TTGHFDMDAELKIWISGQSEPLVKELKRGTDVVGIQKTIATFAL
Sequences:
>Translated_124_residues MGLLDGLLGNASEVDLQELAEELRPIMGIQEELKLAYKVIRDLFIFTNKRLILIDKQGLTGKKVTYHSIPYKSITHFEVE TTGHFDMDAELKIWISGQSEPLVKELKRGTDVVGIQKTIATFAL >Mature_123_residues GLLDGLLGNASEVDLQELAEELRPIMGIQEELKLAYKVIRDLFIFTNKRLILIDKQGLTGKKVTYHSIPYKSITHFEVET TGHFDMDAELKIWISGQSEPLVKELKRGTDVVGIQKTIATFAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012544 [H]
Pfam domain/function: PF08000 DUF1696 [H]
EC number: NA
Molecular weight: Translated: 13974; Mature: 13842
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLLDGLLGNASEVDLQELAEELRPIMGIQEELKLAYKVIRDLFIFTNKRLILIDKQGLT CCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC GKKVTYHSIPYKSITHFEVETTGHFDMDAELKIWISGQSEPLVKELKRGTDVVGIQKTIA CCCEEEECCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHCCCCEEHHHHHHH TFAL HHCC >Mature Secondary Structure GLLDGLLGNASEVDLQELAEELRPIMGIQEELKLAYKVIRDLFIFTNKRLILIDKQGLT CCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC GKKVTYHSIPYKSITHFEVETTGHFDMDAELKIWISGQSEPLVKELKRGTDVVGIQKTIA CCCEEEECCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHCCCCEEHHHHHHH TFAL HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]