| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is dcp [H]
Identifier: 160876101
GI number: 160876101
Start: 3555872
End: 3558022
Strand: Direct
Name: dcp [H]
Synonym: Sbal195_2992
Alternate gene names: 160876101
Gene position: 3555872-3558022 (Clockwise)
Preceding gene: 160876100
Following gene: 160876105
Centisome position: 66.5
GC content: 50.4
Gene sequence:
>2151_bases ATGCGTAAACGTTTTATTGCCATCGCCATCGGCGCCACGCTCACCGCCGGATTTATGGCAGGTTGTAGCAACACAGAAAG CAAAGCCCCTAACGCCATGTCGGTACAAGCCCAAAACCCCTTGTTTCAAGTCAGTAGTCTGCAATATCAAGCGCCCGACT TTAGCCTCATCAAGAATGAGCATTTTACGCCTGCCCTAGAGCAAGGTATGGCCGAGCACTATCAAGAAATCCTCGCGATT GCGAATAATCCCGCAGCGGCCAGTTTTGATAACACCATTGTGGCTATGGAAAAAAGCGGTGCCCTGCTCAGCCGCGCATC GAGTGTGTTTTATAATCTAGCGGGTTCGAACAGCAATCCAGTGCTGCGTAAAATTCAAGGTGAAATGGCACCCAAAATGG CGGCGCACTCGGACAACATTAACTTAAATCCAGCGCTATTTGCCCGTATCGAAGCCATTTATAACGATCGTACTAATCTA GGTTTAACCCCAGAAGCCGTGCGTTTGGTTGAGGTCTATCATCAACGCTTTATCATGGCGGGCGCTAAGCTGACTGATGA GCAGAAAGTGAAGATCCGCGCATTAAATGAAGAACAATCGACACTGACCAATGAGTTTTCCCAGCGTTTACTGCGCTTAA CTAAAGAAATCGCCGTGGTCGTGGAGTCAAAGAATGAACTTGCAGGATTAACTGACAGCGACATCACTTCAGCCGCAAAC GATGCTAAAGCGGCGGGTCACGATGGCAAGTATCTGATCAACATCACCAACACCACTCGTCAGCCCGTATTGGCGTCACT GGAAAACCGTGAACTGCGCCAACGCATTTGGGAAGCCTCTGCTAACCGTGGCTTAACGGGTGAAAACGAAACCGCATCTT TAGTGTCTCGTTTAGCGCAATTACGTGCCGAGCGTGCCGCGCTATTAGGTTATGAAAACTGGGCCAGTTATCGCCTAGCG CCGCAAATGGCCAAAACACCAGAAGCGGTTTACAGCATGTTTGGCTCTATGGTGCCAGCCGTAGTCGCAAATACAGAGAA AGAAGCGGCCGATATTCAAGCCATGATCGACAAGACTGGCGGCAAATTTGAACTGGCGCCATGGGACTGGGAATTCTACG CCGAGAAAGTCCGCCAAGAAAAATACGCCCTCGATGGTAATAGCATTCGCCCATACTTTGAGTTTAACCGCGTCCTCGAA GATGGCGTGTTCTACACACTCAAAGAACTCTATGGCGTCACCCTAAAACCTCGCCCAGATTTACCGGTTTATCATCCCGA TGTGAAAGCCTACGAAATGTTTGATGCCGATGGCTCAAGCATGGCCATTTTCTACGCCGACTATTTTGCCCGTGAAGGTA AACGTGGCGGCGCTTGGATGAGTTCGTTCGTCGGTCAATCCTTCCTCGAAGGCACTAAACCTGTGGTCGTCAACGTGATG AACATCAAGAAAGCGCCAGAGGGTGAACCCACATTCGTCAGCTATAACGAAGTCACCACCATGTTCCATGAAATGGGCCA CGGCACCCACGGCATGTTCTCTAAAGTGACTTACCCTAGTCTGGCGGGCACTTCGGTTTCCCGCGACTTTGTCGAATTCC CATCAACCTTCGAAGAAGACTGGGCGGCCCATCCCAAAGTGTTGGCCAACTACGCGAAACACTATGAAACCGGCAAACCG ATTCCCGACGAATTGCTGCAAAAACTGCTGAAATCTGGCAGCTTTAACCAAGGGTTCGACACACTGGAATACATGGCCGC CGCATTAGTGGATATGGAGTGGCATTCATTAAGCCCAGATGCACCACTGCAAGATGTGGCCACCTTTGAAGCCAATGCCC TGAAAAAGCACGGCTTAAACATCAGCGCCGTGCCCCCACGCTATAAATCGACCTACTTTGCCCACGCCTTCCCCGGTGGT TACTCGGCAAGTTATTACGCGTATATGTGGAGTGAGATTTTAGCGGCGGATGCCTTTGCCTATGTGCAAACCCAAGGCGG GCTCAATCGTGAAATCGGCATGAAATACCGCAAAACCATTCGTGAAGTGGGCAATAGCATAGCGCCAATGGAAGCCTACA AAAACTTCCGCGGACAAGAGCCAACGACACAAGGATTACTTAAACGCCGCGGGCTAGACCAAGCACTCTAA
Upstream 100 bases:
>100_bases TTATTTAGATACAGCCCCATAACAAGCCATTTTCAGTCCCATTTAAGTTACTAACGTTACAGTCCTAAAAAAACAACAAT TCAAAGGAAGTCACTCAATT
Downstream 100 bases:
>100_bases GCTACAAAAATCCTAAGCGGCAAGTAGCCTAAGTTAAGTACTGATAGCCTTAATGTGATTAGGTTAAAGATAGAGATAGA GCGTTAACCAAAAAAATCAG
Product: peptidyl-dipeptidase Dcp
Products: NA
Alternate protein names: Dipeptidyl carboxypeptidase [H]
Number of amino acids: Translated: 716; Mature: 716
Protein sequence:
>716_residues MRKRFIAIAIGATLTAGFMAGCSNTESKAPNAMSVQAQNPLFQVSSLQYQAPDFSLIKNEHFTPALEQGMAEHYQEILAI ANNPAAASFDNTIVAMEKSGALLSRASSVFYNLAGSNSNPVLRKIQGEMAPKMAAHSDNINLNPALFARIEAIYNDRTNL GLTPEAVRLVEVYHQRFIMAGAKLTDEQKVKIRALNEEQSTLTNEFSQRLLRLTKEIAVVVESKNELAGLTDSDITSAAN DAKAAGHDGKYLINITNTTRQPVLASLENRELRQRIWEASANRGLTGENETASLVSRLAQLRAERAALLGYENWASYRLA PQMAKTPEAVYSMFGSMVPAVVANTEKEAADIQAMIDKTGGKFELAPWDWEFYAEKVRQEKYALDGNSIRPYFEFNRVLE DGVFYTLKELYGVTLKPRPDLPVYHPDVKAYEMFDADGSSMAIFYADYFAREGKRGGAWMSSFVGQSFLEGTKPVVVNVM NIKKAPEGEPTFVSYNEVTTMFHEMGHGTHGMFSKVTYPSLAGTSVSRDFVEFPSTFEEDWAAHPKVLANYAKHYETGKP IPDELLQKLLKSGSFNQGFDTLEYMAAALVDMEWHSLSPDAPLQDVATFEANALKKHGLNISAVPPRYKSTYFAHAFPGG YSASYYAYMWSEILAADAFAYVQTQGGLNREIGMKYRKTIREVGNSIAPMEAYKNFRGQEPTTQGLLKRRGLDQAL
Sequences:
>Translated_716_residues MRKRFIAIAIGATLTAGFMAGCSNTESKAPNAMSVQAQNPLFQVSSLQYQAPDFSLIKNEHFTPALEQGMAEHYQEILAI ANNPAAASFDNTIVAMEKSGALLSRASSVFYNLAGSNSNPVLRKIQGEMAPKMAAHSDNINLNPALFARIEAIYNDRTNL GLTPEAVRLVEVYHQRFIMAGAKLTDEQKVKIRALNEEQSTLTNEFSQRLLRLTKEIAVVVESKNELAGLTDSDITSAAN DAKAAGHDGKYLINITNTTRQPVLASLENRELRQRIWEASANRGLTGENETASLVSRLAQLRAERAALLGYENWASYRLA PQMAKTPEAVYSMFGSMVPAVVANTEKEAADIQAMIDKTGGKFELAPWDWEFYAEKVRQEKYALDGNSIRPYFEFNRVLE DGVFYTLKELYGVTLKPRPDLPVYHPDVKAYEMFDADGSSMAIFYADYFAREGKRGGAWMSSFVGQSFLEGTKPVVVNVM NIKKAPEGEPTFVSYNEVTTMFHEMGHGTHGMFSKVTYPSLAGTSVSRDFVEFPSTFEEDWAAHPKVLANYAKHYETGKP IPDELLQKLLKSGSFNQGFDTLEYMAAALVDMEWHSLSPDAPLQDVATFEANALKKHGLNISAVPPRYKSTYFAHAFPGG YSASYYAYMWSEILAADAFAYVQTQGGLNREIGMKYRKTIREVGNSIAPMEAYKNFRGQEPTTQGLLKRRGLDQAL >Mature_716_residues MRKRFIAIAIGATLTAGFMAGCSNTESKAPNAMSVQAQNPLFQVSSLQYQAPDFSLIKNEHFTPALEQGMAEHYQEILAI ANNPAAASFDNTIVAMEKSGALLSRASSVFYNLAGSNSNPVLRKIQGEMAPKMAAHSDNINLNPALFARIEAIYNDRTNL GLTPEAVRLVEVYHQRFIMAGAKLTDEQKVKIRALNEEQSTLTNEFSQRLLRLTKEIAVVVESKNELAGLTDSDITSAAN DAKAAGHDGKYLINITNTTRQPVLASLENRELRQRIWEASANRGLTGENETASLVSRLAQLRAERAALLGYENWASYRLA PQMAKTPEAVYSMFGSMVPAVVANTEKEAADIQAMIDKTGGKFELAPWDWEFYAEKVRQEKYALDGNSIRPYFEFNRVLE DGVFYTLKELYGVTLKPRPDLPVYHPDVKAYEMFDADGSSMAIFYADYFAREGKRGGAWMSSFVGQSFLEGTKPVVVNVM NIKKAPEGEPTFVSYNEVTTMFHEMGHGTHGMFSKVTYPSLAGTSVSRDFVEFPSTFEEDWAAHPKVLANYAKHYETGKP IPDELLQKLLKSGSFNQGFDTLEYMAAALVDMEWHSLSPDAPLQDVATFEANALKKHGLNISAVPPRYKSTYFAHAFPGG YSASYYAYMWSEILAADAFAYVQTQGGLNREIGMKYRKTIREVGNSIAPMEAYKNFRGQEPTTQGLLKRRGLDQAL
Specific function: Removes dipeptides from the C-termini of N-blocked tripeptides, tetrapeptides and larger peptides [H]
COG id: COG0339
COG function: function code E; Zn-dependent oligopeptidases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M3 family [H]
Homologues:
Organism=Homo sapiens, GI4507491, Length=606, Percent_Identity=28.5478547854785, Blast_Score=235, Evalue=1e-61, Organism=Homo sapiens, GI14149738, Length=608, Percent_Identity=28.4539473684211, Blast_Score=206, Evalue=5e-53, Organism=Homo sapiens, GI156105687, Length=608, Percent_Identity=22.6973684210526, Blast_Score=157, Evalue=2e-38, Organism=Escherichia coli, GI1787819, Length=676, Percent_Identity=45.5621301775148, Blast_Score=645, Evalue=0.0, Organism=Escherichia coli, GI1789913, Length=685, Percent_Identity=31.2408759124088, Blast_Score=347, Evalue=2e-96, Organism=Caenorhabditis elegans, GI32565901, Length=418, Percent_Identity=24.1626794258373, Blast_Score=81, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6319793, Length=688, Percent_Identity=25.7267441860465, Blast_Score=188, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6322715, Length=477, Percent_Identity=24.9475890985325, Blast_Score=131, Evalue=5e-31, Organism=Drosophila melanogaster, GI21356111, Length=477, Percent_Identity=23.0607966457023, Blast_Score=162, Evalue=1e-39, Organism=Drosophila melanogaster, GI20129717, Length=406, Percent_Identity=26.1083743842365, Blast_Score=144, Evalue=2e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001567 [H]
Pfam domain/function: PF01432 Peptidase_M3 [H]
EC number: =3.4.15.5 [H]
Molecular weight: Translated: 79489; Mature: 79489
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKRFIAIAIGATLTAGFMAGCSNTESKAPNAMSVQAQNPLFQVSSLQYQAPDFSLIKNE CCCEEEEEEECHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEECCCEECCCCHHHHCCC HFTPALEQGMAEHYQEILAIANNPAAASFDNTIVAMEKSGALLSRASSVFYNLAGSNSNP CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHEEECCCCCCH VLRKIQGEMAPKMAAHSDNINLNPALFARIEAIYNDRTNLGLTPEAVRLVEVYHQRFIMA HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHC GAKLTDEQKVKIRALNEEQSTLTNEFSQRLLRLTKEIAVVVESKNELAGLTDSDITSAAN CCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHEEEECCHHHCCCCCCHHHHCCC DAKAAGHDGKYLINITNTTRQPVLASLENRELRQRIWEASANRGLTGENETASLVSRLAQ CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH LRAERAALLGYENWASYRLAPQMAKTPEAVYSMFGSMVPAVVANTEKEAADIQAMIDKTG HHHHHHHHHCCCCCCCCEECCHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC GKFELAPWDWEFYAEKVRQEKYALDGNSIRPYFEFNRVLEDGVFYTLKELYGVTLKPRPD CEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC LPVYHPDVKAYEMFDADGSSMAIFYADYFAREGKRGGAWMSSFVGQSFLEGTKPVVVNVM CCCCCCCCCEEEEECCCCCEEEEEEEHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEE NIKKAPEGEPTFVSYNEVTTMFHEMGHGTHGMFSKVTYPSLAGTSVSRDFVEFPSTFEED ECCCCCCCCCCEEEHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCHHHHHHHCCCHHHHH WAAHPKVLANYAKHYETGKPIPDELLQKLLKSGSFNQGFDTLEYMAAALVDMEWHSLSPD HCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHCCCCCC APLQDVATFEANALKKHGLNISAVPPRYKSTYFAHAFPGGYSASYYAYMWSEILAADAFA CCHHHHHHHHHHHHHHCCCCEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHH YVQTQGGLNREIGMKYRKTIREVGNSIAPMEAYKNFRGQEPTTQGLLKRRGLDQAL EEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHCCCCCCC >Mature Secondary Structure MRKRFIAIAIGATLTAGFMAGCSNTESKAPNAMSVQAQNPLFQVSSLQYQAPDFSLIKNE CCCEEEEEEECHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEECCCEECCCCHHHHCCC HFTPALEQGMAEHYQEILAIANNPAAASFDNTIVAMEKSGALLSRASSVFYNLAGSNSNP CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHEEECCCCCCH VLRKIQGEMAPKMAAHSDNINLNPALFARIEAIYNDRTNLGLTPEAVRLVEVYHQRFIMA HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHC GAKLTDEQKVKIRALNEEQSTLTNEFSQRLLRLTKEIAVVVESKNELAGLTDSDITSAAN CCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHEEEECCHHHCCCCCCHHHHCCC DAKAAGHDGKYLINITNTTRQPVLASLENRELRQRIWEASANRGLTGENETASLVSRLAQ CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH LRAERAALLGYENWASYRLAPQMAKTPEAVYSMFGSMVPAVVANTEKEAADIQAMIDKTG HHHHHHHHHCCCCCCCCEECCHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC GKFELAPWDWEFYAEKVRQEKYALDGNSIRPYFEFNRVLEDGVFYTLKELYGVTLKPRPD CEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC LPVYHPDVKAYEMFDADGSSMAIFYADYFAREGKRGGAWMSSFVGQSFLEGTKPVVVNVM CCCCCCCCCEEEEECCCCCEEEEEEEHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEE NIKKAPEGEPTFVSYNEVTTMFHEMGHGTHGMFSKVTYPSLAGTSVSRDFVEFPSTFEED ECCCCCCCCCCEEEHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCHHHHHHHCCCHHHHH WAAHPKVLANYAKHYETGKPIPDELLQKLLKSGSFNQGFDTLEYMAAALVDMEWHSLSPD HCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHCCCCCC APLQDVATFEANALKKHGLNISAVPPRYKSTYFAHAFPGGYSASYYAYMWSEILAADAFA CCHHHHHHHHHHHHHHCCCCEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHH YVQTQGGLNREIGMKYRKTIREVGNSIAPMEAYKNFRGQEPTTQGLLKRRGLDQAL EEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8226676; 9097039; 9278503 [H]