| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876070
Identifier: 160876070
GI number: 160876070
Start: 3516038
End: 3516439
Strand: Reverse
Name: 160876070
Synonym: Sbal195_2960
Alternate gene names: NA
Gene position: 3516439-3516038 (Counterclockwise)
Preceding gene: 160876071
Following gene: 160876069
Centisome position: 65.76
GC content: 43.03
Gene sequence:
>402_bases ATGTATCTGAAAATAAAGTCGTTTGTATTGTTCTCGCTCATGGCTATTCTACTCAATGGCTGCGTGACGGTGAAACCTGA ACCCCCGATTATTATCAATGGCGCAGCGGGTTATTTAGAGAAAATTCCCTTGCCTCAAGGTTGCCAAATCACTATTGCAA TCATTGATTTGAATACCCCGGGTATTATCGTCGCACAGAAAACCTTTAACATCGCCAGAGCGCCAGTGCCGTTTAAATTT ACGCTGCCTGCAAAATCGATCGATAAGAGTATCCAATATGGCGTAGTGGCGATGATCAAGTTCCAAGACCAAGTGATCTT CCAAACCTATGACAGGTTCCCTGTCGTCAATAATGATAAGTTCACGACAGAAGTGTTAATGAAGGCGGTCATGGCTAATT AA
Upstream 100 bases:
>100_bases GGCAGAGGTTACGTCAGAGGGCAGTTTTTCAATCAACAAGGTGAATTAGTGGCTTCTTCTACCCAAGAAGGCCTGATCCG CATGGTAAAAGGACGTTAAT
Downstream 100 bases:
>100_bases TCACTCCTAATTATTGCCTGCGCATTATTTTTGTATTGCTGAAGATGTAGCCCTTTCAATTTATATTGGAAGGGCTTTTT TGTGGTTAATATTCGGGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MYLKIKSFVLFSLMAILLNGCVTVKPEPPIIINGAAGYLEKIPLPQGCQITIAIIDLNTPGIIVAQKTFNIARAPVPFKF TLPAKSIDKSIQYGVVAMIKFQDQVIFQTYDRFPVVNNDKFTTEVLMKAVMAN
Sequences:
>Translated_133_residues MYLKIKSFVLFSLMAILLNGCVTVKPEPPIIINGAAGYLEKIPLPQGCQITIAIIDLNTPGIIVAQKTFNIARAPVPFKF TLPAKSIDKSIQYGVVAMIKFQDQVIFQTYDRFPVVNNDKFTTEVLMKAVMAN >Mature_133_residues MYLKIKSFVLFSLMAILLNGCVTVKPEPPIIINGAAGYLEKIPLPQGCQITIAIIDLNTPGIIVAQKTFNIARAPVPFKF TLPAKSIDKSIQYGVVAMIKFQDQVIFQTYDRFPVVNNDKFTTEVLMKAVMAN
Specific function: Unknown
COG id: COG3126
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14736; Mature: 14736
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLKIKSFVLFSLMAILLNGCVTVKPEPPIIINGAAGYLEKIPLPQGCQITIAIIDLNTP CEEEEHHHHHHHHHHHHHCCEEEECCCCCEEEECCCCHHHHCCCCCCCEEEEEEEEECCC GIIVAQKTFNIARAPVPFKFTLPAKSIDKSIQYGVVAMIKFQDQVIFQTYDRFPVVNNDK CEEEEECCCCEECCCCCEEEECCHHHHCCCCCCCEEEEEEECCEEEEEHHCCCCCCCCCC FTTEVLMKAVMAN HHHHHHHHHHHCC >Mature Secondary Structure MYLKIKSFVLFSLMAILLNGCVTVKPEPPIIINGAAGYLEKIPLPQGCQITIAIIDLNTP CEEEEHHHHHHHHHHHHHCCEEEECCCCCEEEECCCCHHHHCCCCCCCEEEEEEEEECCC GIIVAQKTFNIARAPVPFKFTLPAKSIDKSIQYGVVAMIKFQDQVIFQTYDRFPVVNNDK CEEEEECCCCEECCCCCEEEECCHHHHCCCCCCCEEEEEEECCEEEEEHHCCCCCCCCCC FTTEVLMKAVMAN HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA