Click here to switch to the map view.

The map label for this gene is 160876060

Identifier: 160876060

GI number: 160876060

Start: 3501375

End: 3502031

Strand: Direct

Name: 160876060

Synonym: Sbal195_2950

Alternate gene names: NA

Gene position: 3501375-3502031 (Clockwise)

Preceding gene: 160876059

Following gene: 160876061

Centisome position: 65.48

GC content: 42.92

Gene sequence:

>657_bases
ATGGCTGTGATATCGCGAATATTTGGTTATTTTGAAGAAGGTGTGCTCAATTTATTGATCACTCTGATGACGTTGTTAGT
GTTTTCAGAAGTCGTCGCACGCTTCTTCTTCAATACGGGTTTTCTGTGGATCCAAGAACTCACACTGACCTTTTGCGGTT
GGTTTGTGTTGTTTGGTATGTCTTATGGGGTAAAAGTTGGCGCGCACATTGGTGTCGATGCCTTCGTTAAAAACTTAGCG
CCTCGGGCCAAAAAGATAACGTCCCTCGTTACCGCCTTTGTCTGTATCGTCTATTGCGGACTGTTTTTAAAGGGCAGTTG
GGATTACTTAAGCCAGATGTATCAAATTGGTGTGCCTATGGAGGATATTAATTTCCCCCAATTTTTCTTAAAAAGCCTCG
ATCCAGACTTTGCTTGGAACACCTTACGGATTGATGTTGAAGATGGCGCGGTACCAATTTGGTTATCCCAGAGCATCTTG
ATCATTGGTTTTTCGATGTTGACTTGGCGATTCGCCGAACTCTTTATTGCCATCCTACGTGACCAAGTCACTGGCTTCCA
ATTTGCCGATGAAGCGAAAGAAAGTATGCATTTAATCGATGAAAGCGTTAAAAACGCCAATGAAGAACCCGTCTCTGACG
AAAAGGAGACTAAATAA

Upstream 100 bases:

>100_bases
GTAAAGATGTGATTGATGCTGCTGTAGCTGCAAATAAATAATAATGATGATAGCCGCTTAATCTCAACCGAGGTTAAGTG
GCCATTTCAGCGAGGGGATT

Downstream 100 bases:

>100_bases
TGGCGATTGCAACCCTATTTACCGCCCTATTAGTGTGCATGTTTCTCGGTATGCCTATCGCTATCGCGTTAGGTTTTTCC
AGCATGCTCACCATTTTGTT

Product: tripartite ATP-independent periplasmic transporter DctQ

Products: NA

Alternate protein names: Trap Transporter Dctq Subunit; C4-Dicarboxylate Transport Protein DctQ; C4-Dicarboxylate Transporter; Dicarboxylate Transporter; C4-Dicarboxylate Transporter Small Permease Component; Transporter-Like Membrane Protein; TRAP-Type C4-Dicarboxylate Transporter Small Permease; TRAP Transporter DctQ-Like Membrane Protein; C4-Dicarboxylate Transporter Small Subunit; TRAP Transporter DctQ Subunit

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MAVISRIFGYFEEGVLNLLITLMTLLVFSEVVARFFFNTGFLWIQELTLTFCGWFVLFGMSYGVKVGAHIGVDAFVKNLA
PRAKKITSLVTAFVCIVYCGLFLKGSWDYLSQMYQIGVPMEDINFPQFFLKSLDPDFAWNTLRIDVEDGAVPIWLSQSIL
IIGFSMLTWRFAELFIAILRDQVTGFQFADEAKESMHLIDESVKNANEEPVSDEKETK

Sequences:

>Translated_218_residues
MAVISRIFGYFEEGVLNLLITLMTLLVFSEVVARFFFNTGFLWIQELTLTFCGWFVLFGMSYGVKVGAHIGVDAFVKNLA
PRAKKITSLVTAFVCIVYCGLFLKGSWDYLSQMYQIGVPMEDINFPQFFLKSLDPDFAWNTLRIDVEDGAVPIWLSQSIL
IIGFSMLTWRFAELFIAILRDQVTGFQFADEAKESMHLIDESVKNANEEPVSDEKETK
>Mature_217_residues
AVISRIFGYFEEGVLNLLITLMTLLVFSEVVARFFFNTGFLWIQELTLTFCGWFVLFGMSYGVKVGAHIGVDAFVKNLAP
RAKKITSLVTAFVCIVYCGLFLKGSWDYLSQMYQIGVPMEDINFPQFFLKSLDPDFAWNTLRIDVEDGAVPIWLSQSILI
IGFSMLTWRFAELFIAILRDQVTGFQFADEAKESMHLIDESVKNANEEPVSDEKETK

Specific function: Unknown

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24823; Mature: 24692

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVISRIFGYFEEGVLNLLITLMTLLVFSEVVARFFFNTGFLWIQELTLTFCGWFVLFGM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
SYGVKVGAHIGVDAFVKNLAPRAKKITSLVTAFVCIVYCGLFLKGSWDYLSQMYQIGVPM
HHCCHHCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCH
EDINFPQFFLKSLDPDFAWNTLRIDVEDGAVPIWLSQSILIIGFSMLTWRFAELFIAILR
HHCCCHHHHHHHCCCCCCCCEEEEEECCCCEEEHHHCHHHHHHHHHHHHHHHHHHHHHHH
DQVTGFQFADEAKESMHLIDESVKNANEEPVSDEKETK
HHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
AVISRIFGYFEEGVLNLLITLMTLLVFSEVVARFFFNTGFLWIQELTLTFCGWFVLFGM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
SYGVKVGAHIGVDAFVKNLAPRAKKITSLVTAFVCIVYCGLFLKGSWDYLSQMYQIGVPM
HHCCHHCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCH
EDINFPQFFLKSLDPDFAWNTLRIDVEDGAVPIWLSQSILIIGFSMLTWRFAELFIAILR
HHCCCHHHHHHHCCCCCCCCEEEEEECCCCEEEHHHCHHHHHHHHHHHHHHHHHHHHHHH
DQVTGFQFADEAKESMHLIDESVKNANEEPVSDEKETK
HHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA