| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876040
Identifier: 160876040
GI number: 160876040
Start: 3473549
End: 3474940
Strand: Reverse
Name: 160876040
Synonym: Sbal195_2930
Alternate gene names: NA
Gene position: 3474940-3473549 (Counterclockwise)
Preceding gene: 160876041
Following gene: 160876039
Centisome position: 64.99
GC content: 34.2
Gene sequence:
>1392_bases GTGCAGATTAAAATTAAAGATATAGCTATCGAACAGAATGATCCCTTTAAATATGATTGTCTGGAACGAAAATCTGAAAT AGAAAATATTTCATCTATAACTACAAACATATGCGCTCCATTAGTAATGGCGATAGATTCACCTTGGGGAACTGGCAAGA CTACATTTATTAAAATGTGGCGTGCATATTTAGAATCACAGCAAGTTACCACAATCTATTTTAATGCTTGGGAAAGTGAT TATGCTGAAGACCCACTGGTTGCCTTGGTATCTGAATTAGATATTTGGGTTAAATCTCTCAATAACACAGAATTAAGTGC AGGCATTTGGAAACAAGCTAAGTCTCTTTTACCTGGAATAGCTAAATCCACAGCTGTAGCAACAGCTAAAATCGCTACTT TTGGGGCACTTGATATTGAGAAGGAATATGAAAAAATTGCCTCCGATTTAGTTGGTGGAACGGTAGATGATTTGGTTGAT AGCTTCAATATTCAGTCTTCCGCAATCAGCAGGTTTAAAGATATTGTAGAACAAACAATTTCTGAACTTGGAGAAGAACA GAAAAACTTAATAATATTTGTTGATGAATTAGATCGCTGTCGGCCAACGTATGCAATTGAGCTATTAGAACGAATTAAAC ATTTATTTAATATCGAACGTTTAATTTTTGTCTTATCAACAGATGTTGAACAATTATCTCATAGTATTTGTGCTGTTTAT GGAAACGATTTTAACGCTCGTAAATATTTACAACGATTTATTGATATCGATTACTCTCTTAAAAAGCCTGCAACTAAAAA TTATATAGTTAGCCTATTCCATTCGTTATCTATCAATGAATACTTTAAAGCTCGTAAGGAAGGGCATTATGAACAAGAAC ATCTCATTGATTGTTGTGATATTTTCTCAACGCGGTTTGACTTGTCGTTGAGAGGAATAAACCTACTTTTAACCCGAGTA CGGTTAGTTCTGAGTTCAATACCTTCCAATAATTATCTGTACGAACCGCTTCTTATTAGTCTTTTGCTTCTTCGTGAACA TAACATTGAACTATATAACAGGTACTGCAATGAACCTAAAACAGCAGATGAAGTTATAGCTTACTTTACGAAAGGGTTAT CAAGTGAAGTGGTTTGCACTTTTTCTTTTTCGCTAATAGCTGGTTACTTAATTGCGCCTAATTTAGATCACTCAAATAAC AGTAGGTTTGAAGAGTTGGTTGCACCTTATAAAAAGATCCTTGCAGATGACGACAATAAAAATAGTGATTTAGCATATGC TGCTGATAAGGTACTTTTAATCTCAGGTGCTAGCAATGGTATGAGACGAAATGTAAACCTTAAAACTACAATTGAAAGAG TTGAGTTACTACATAGAATTCAGATTGAGTAG
Upstream 100 bases:
>100_bases GTGCCTCACACATTTTAGCCAGCTATTATTTGCCGCTTAACGTGGCGGTTAGAGCTAAAAATCGTACTTTTGCATTATTC TAGATAAGGACATTATTGCA
Downstream 100 bases:
>100_bases TATTTAGCTCTAACAAGTTGCTTAAACGGACGTCTAAATGTTGGCTGTCGTTCGTTCCTCACTAATTTTAGCCAACTATT TTTACGCCGCTTAGCATGGC
Product: KAP P-loop domain-containing protein
Products: NA
Alternate protein names: KAP P-Loop Domain Protein; KAP P-Loop; P-Loop ATPase; KAP Family P-Loop Domain Protein; Kap P-Loop Domain Protein; KAP Family P-Loop Domain-Containing Protein; Phage T7 Exclusion Protein
Number of amino acids: Translated: 463; Mature: 463
Protein sequence:
>463_residues MQIKIKDIAIEQNDPFKYDCLERKSEIENISSITTNICAPLVMAIDSPWGTGKTTFIKMWRAYLESQQVTTIYFNAWESD YAEDPLVALVSELDIWVKSLNNTELSAGIWKQAKSLLPGIAKSTAVATAKIATFGALDIEKEYEKIASDLVGGTVDDLVD SFNIQSSAISRFKDIVEQTISELGEEQKNLIIFVDELDRCRPTYAIELLERIKHLFNIERLIFVLSTDVEQLSHSICAVY GNDFNARKYLQRFIDIDYSLKKPATKNYIVSLFHSLSINEYFKARKEGHYEQEHLIDCCDIFSTRFDLSLRGINLLLTRV RLVLSSIPSNNYLYEPLLISLLLLREHNIELYNRYCNEPKTADEVIAYFTKGLSSEVVCTFSFSLIAGYLIAPNLDHSNN SRFEELVAPYKKILADDDNKNSDLAYAADKVLLISGASNGMRRNVNLKTTIERVELLHRIQIE
Sequences:
>Translated_463_residues MQIKIKDIAIEQNDPFKYDCLERKSEIENISSITTNICAPLVMAIDSPWGTGKTTFIKMWRAYLESQQVTTIYFNAWESD YAEDPLVALVSELDIWVKSLNNTELSAGIWKQAKSLLPGIAKSTAVATAKIATFGALDIEKEYEKIASDLVGGTVDDLVD SFNIQSSAISRFKDIVEQTISELGEEQKNLIIFVDELDRCRPTYAIELLERIKHLFNIERLIFVLSTDVEQLSHSICAVY GNDFNARKYLQRFIDIDYSLKKPATKNYIVSLFHSLSINEYFKARKEGHYEQEHLIDCCDIFSTRFDLSLRGINLLLTRV RLVLSSIPSNNYLYEPLLISLLLLREHNIELYNRYCNEPKTADEVIAYFTKGLSSEVVCTFSFSLIAGYLIAPNLDHSNN SRFEELVAPYKKILADDDNKNSDLAYAADKVLLISGASNGMRRNVNLKTTIERVELLHRIQIE >Mature_463_residues MQIKIKDIAIEQNDPFKYDCLERKSEIENISSITTNICAPLVMAIDSPWGTGKTTFIKMWRAYLESQQVTTIYFNAWESD YAEDPLVALVSELDIWVKSLNNTELSAGIWKQAKSLLPGIAKSTAVATAKIATFGALDIEKEYEKIASDLVGGTVDDLVD SFNIQSSAISRFKDIVEQTISELGEEQKNLIIFVDELDRCRPTYAIELLERIKHLFNIERLIFVLSTDVEQLSHSICAVY GNDFNARKYLQRFIDIDYSLKKPATKNYIVSLFHSLSINEYFKARKEGHYEQEHLIDCCDIFSTRFDLSLRGINLLLTRV RLVLSSIPSNNYLYEPLLISLLLLREHNIELYNRYCNEPKTADEVIAYFTKGLSSEVVCTFSFSLIAGYLIAPNLDHSNN SRFEELVAPYKKILADDDNKNSDLAYAADKVLLISGASNGMRRNVNLKTTIERVELLHRIQIE
Specific function: Unknown
COG id: COG4928
COG function: function code R; Predicted P-loop ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52770; Mature: 52770
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIKIKDIAIEQNDPFKYDCLERKSEIENISSITTNICAPLVMAIDSPWGTGKTTFIKMW CEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH RAYLESQQVTTIYFNAWESDYAEDPLVALVSELDIWVKSLNNTELSAGIWKQAKSLLPGI HHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCH AKSTAVATAKIATFGALDIEKEYEKIASDLVGGTVDDLVDSFNIQSSAISRFKDIVEQTI HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHH SELGEEQKNLIIFVDELDRCRPTYAIELLERIKHLFNIERLIFVLSTDVEQLSHSICAVY HHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHEEEE GNDFNARKYLQRFIDIDYSLKKPATKNYIVSLFHSLSINEYFKARKEGHYEQEHLIDCCD CCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHH IFSTRFDLSLRGINLLLTRVRLVLSSIPSNNYLYEPLLISLLLLREHNIELYNRYCNEPK HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCC TADEVIAYFTKGLSSEVVCTFSFSLIAGYLIAPNLDHSNNSRFEELVAPYKKILADDDNK CHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCC NSDLAYAADKVLLISGASNGMRRNVNLKTTIERVELLHRIQIE CCCCEEECCEEEEEECCCCCCEECCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQIKIKDIAIEQNDPFKYDCLERKSEIENISSITTNICAPLVMAIDSPWGTGKTTFIKMW CEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH RAYLESQQVTTIYFNAWESDYAEDPLVALVSELDIWVKSLNNTELSAGIWKQAKSLLPGI HHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCH AKSTAVATAKIATFGALDIEKEYEKIASDLVGGTVDDLVDSFNIQSSAISRFKDIVEQTI HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHH SELGEEQKNLIIFVDELDRCRPTYAIELLERIKHLFNIERLIFVLSTDVEQLSHSICAVY HHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHEEEE GNDFNARKYLQRFIDIDYSLKKPATKNYIVSLFHSLSINEYFKARKEGHYEQEHLIDCCD CCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHH IFSTRFDLSLRGINLLLTRVRLVLSSIPSNNYLYEPLLISLLLLREHNIELYNRYCNEPK HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCC TADEVIAYFTKGLSSEVVCTFSFSLIAGYLIAPNLDHSNNSRFEELVAPYKKILADDDNK CHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCC NSDLAYAADKVLLISGASNGMRRNVNLKTTIERVELLHRIQIE CCCCEEECCEEEEEECCCCCCEECCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA