| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876026
Identifier: 160876026
GI number: 160876026
Start: 3461525
End: 3463294
Strand: Direct
Name: 160876026
Synonym: Sbal195_2916
Alternate gene names: NA
Gene position: 3461525-3463294 (Clockwise)
Preceding gene: 160876014
Following gene: 160876027
Centisome position: 64.73
GC content: 50.4
Gene sequence:
>1770_bases ATGAAACTGAATCCCCAAATCTCTACAGATAAGAATCAACGCCAATCTGCCAAAAACCTTTTTTGGCAAGGCTGGGCTGT CCGCGAGATTAGCCAGCATTTACAACTGCCCGAAAGTACCGTGTCGAGTTGGAAAAAACGCGATGCCTGGGAAGATGCCA AACCCATTGACAGGGTGGACTCTGCGCTTGAAATGCGCATGCTGCAGCTCATCAACAAAGAGGATAAAGACGGTAAGGAT TTTAAGGAGATAGACCTACTCGGTCGGCAGCTGGAGCGAATTGCCCGCATCACTCGCTATCACAATGGCGGCAATGAGGC TGACCTCAATCCGAACGTGCAAAACCGCAATGCTGGACCGAAAAAGCCGCCGGTGAAGAACCATGTGAGCGAAGAGGATT TGGAAAAGCTGATTGAGGCGTTCCAAGGCTCGATGTTTGCCTATCAAAAGGAATGGTACACAGCAGGACTCACCCAGCGT ATACGCAACATCTTAAAGTCTCGCCAAATTGGCGCGACGTACTTTTTTGCCCATGAAGCCATTATTGATGCGCTATTAAC GGGCCGTAACCAAATCTTTTTATCTGCCAGTAAAGCACAGGCCCATGTGTTTAAGCAGTACATCATTCAGTTCGTGAAGG ATGTCACCGGCATTGAACTCAAGGGCGATCCTATTGTGCTTTTCAACGGTGCCATTCTGTACTTTTTGGGCACCAATGCC AGAACGGCCCAGTCTTACCATGGCAACCTGTATTTGGATGAGTACTTTTGGATCCACAAGTTCCAAGAGTTCCGCAAGGT CGCCTCAGGTATGGCTATCCATGCTAAATGGCGCCAAACCTACATATCTACCCCGTCCTCAATTACCCACGACGCCTACC CGTTTTGGACTGGCACATTGTTCAACCGTGGCCGCCCTAAAGCCGATCGCATTGAAATTGATGTGAGCCATAGCGCCCTA GCAAATGGTCGCAGGTGTGAGGATGGCCAATGGCGGCAAGTGGTTACGGTCGATGATGCTATCCGCAAAGGTTGCAACTT ATTCGACCCCGATACCCTGCACTTAGAGTACAGCCCTGACGAATATTCAAACCTGCTAATGTGCGAGTTCATCGACGACA CTATGTCGGTGTTCCCTATGGTGATGATGCAGCGCTGCATGGTCGATTCGTGGGAAGTGTGGACAGACTACAAGCCTTTT GCGCCAAGACCGCTGGCGCACCGTGAAGTGTGGATTGGTTACGACCCTAACAAAGGCGGCAAAGGTGATAGCGCCGGTTG CATTGTGATCTGCCCACCTGCTGTGCCAGGCGGTAAGTTCCGCGTGATAGAAAAACACCGTTGGAACGGGATGGACTTTG AGGCACAGGCCAAAGCAATTCAGGATATCTGCAATAAATACAACGTGACCTTTATCGGTATCGATACCACTGGGCTGGGT GAGGCTGTGTATCAACTGGTGAAGAAGTTTTTCCCGCAGGTCACGCCATTCCTCTACAACCCAGTGCTGAAAAGTCAGAT GGTAATCAAGGCCTATGACGTGATCAGCAAAGGCCGCTTGGAATATGACGCAGGTTGGACCGACCTCGCCCAGGCATTTA TGAGCATTCGCAAAACCCTGACCGCTAGCGGCAAACAAGTTACCTATGAATCCGCTCGAAGTGAAGAAATTAGCCACGCT GATATCGCGTGGGCGGCAATGCATGCGCTTTACAATGAGCCACTGGATACCAGCGGCACCAGTACATCGACGTTGGAGAT TTACGACTAA
Upstream 100 bases:
>100_bases AAGAGCAAGGCGATGATGGGCAAGGGCTTCGGGCGGTATAAGGAAACCGATACCGCTTAAACAGCAGGGTTTTCGGTATT GGGCTATTTACACTGGCGCC
Downstream 100 bases:
>100_bases TGGCAAAATATAGAAAGGCTCGAACCATGGCAGCCAAACCGCAACAGCAGCAAGGGCCGCAAGAGCAACGAATTGAGACC TTTACCTTTGGCGACCCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Terminase ATPase Subunit; Terminase; Phage-Related Terminase ATPase Subunit; Terminase Related Protein; Bacteriophage Terminase; Orf16-Like Phage Protein; Phage Terminase ATPase Subunit P; Mu-Like Prophage FluMu Protein Gp; Prophage; ATPase Subunit Of Terminase; Phage Gene; Terminase Subunit; Phage P2 Terminase ATPase Subunit GpP-Like Protein; Bacteriophage Terminase Large Subunit; Prophage Large Terminase Protein; Fels-2 Prophage Protein; Phage Terminase Subunit GpP; Terminase Large Subunit; DNA-Dependent ATPase Terminase Subunit; Terminase ATPase Subunit Bacteriophage Origin; Bacteriophage P2 GPP Capsid Protein; Phage Terminase Subunit; Phage-Related Terminase
Number of amino acids: Translated: 589; Mature: 589
Protein sequence:
>589_residues MKLNPQISTDKNQRQSAKNLFWQGWAVREISQHLQLPESTVSSWKKRDAWEDAKPIDRVDSALEMRMLQLINKEDKDGKD FKEIDLLGRQLERIARITRYHNGGNEADLNPNVQNRNAGPKKPPVKNHVSEEDLEKLIEAFQGSMFAYQKEWYTAGLTQR IRNILKSRQIGATYFFAHEAIIDALLTGRNQIFLSASKAQAHVFKQYIIQFVKDVTGIELKGDPIVLFNGAILYFLGTNA RTAQSYHGNLYLDEYFWIHKFQEFRKVASGMAIHAKWRQTYISTPSSITHDAYPFWTGTLFNRGRPKADRIEIDVSHSAL ANGRRCEDGQWRQVVTVDDAIRKGCNLFDPDTLHLEYSPDEYSNLLMCEFIDDTMSVFPMVMMQRCMVDSWEVWTDYKPF APRPLAHREVWIGYDPNKGGKGDSAGCIVICPPAVPGGKFRVIEKHRWNGMDFEAQAKAIQDICNKYNVTFIGIDTTGLG EAVYQLVKKFFPQVTPFLYNPVLKSQMVIKAYDVISKGRLEYDAGWTDLAQAFMSIRKTLTASGKQVTYESARSEEISHA DIAWAAMHALYNEPLDTSGTSTSTLEIYD
Sequences:
>Translated_589_residues MKLNPQISTDKNQRQSAKNLFWQGWAVREISQHLQLPESTVSSWKKRDAWEDAKPIDRVDSALEMRMLQLINKEDKDGKD FKEIDLLGRQLERIARITRYHNGGNEADLNPNVQNRNAGPKKPPVKNHVSEEDLEKLIEAFQGSMFAYQKEWYTAGLTQR IRNILKSRQIGATYFFAHEAIIDALLTGRNQIFLSASKAQAHVFKQYIIQFVKDVTGIELKGDPIVLFNGAILYFLGTNA RTAQSYHGNLYLDEYFWIHKFQEFRKVASGMAIHAKWRQTYISTPSSITHDAYPFWTGTLFNRGRPKADRIEIDVSHSAL ANGRRCEDGQWRQVVTVDDAIRKGCNLFDPDTLHLEYSPDEYSNLLMCEFIDDTMSVFPMVMMQRCMVDSWEVWTDYKPF APRPLAHREVWIGYDPNKGGKGDSAGCIVICPPAVPGGKFRVIEKHRWNGMDFEAQAKAIQDICNKYNVTFIGIDTTGLG EAVYQLVKKFFPQVTPFLYNPVLKSQMVIKAYDVISKGRLEYDAGWTDLAQAFMSIRKTLTASGKQVTYESARSEEISHA DIAWAAMHALYNEPLDTSGTSTSTLEIYD >Mature_589_residues MKLNPQISTDKNQRQSAKNLFWQGWAVREISQHLQLPESTVSSWKKRDAWEDAKPIDRVDSALEMRMLQLINKEDKDGKD FKEIDLLGRQLERIARITRYHNGGNEADLNPNVQNRNAGPKKPPVKNHVSEEDLEKLIEAFQGSMFAYQKEWYTAGLTQR IRNILKSRQIGATYFFAHEAIIDALLTGRNQIFLSASKAQAHVFKQYIIQFVKDVTGIELKGDPIVLFNGAILYFLGTNA RTAQSYHGNLYLDEYFWIHKFQEFRKVASGMAIHAKWRQTYISTPSSITHDAYPFWTGTLFNRGRPKADRIEIDVSHSAL ANGRRCEDGQWRQVVTVDDAIRKGCNLFDPDTLHLEYSPDEYSNLLMCEFIDDTMSVFPMVMMQRCMVDSWEVWTDYKPF APRPLAHREVWIGYDPNKGGKGDSAGCIVICPPAVPGGKFRVIEKHRWNGMDFEAQAKAIQDICNKYNVTFIGIDTTGLG EAVYQLVKKFFPQVTPFLYNPVLKSQMVIKAYDVISKGRLEYDAGWTDLAQAFMSIRKTLTASGKQVTYESARSEEISHA DIAWAAMHALYNEPLDTSGTSTSTLEIYD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67296; Mature: 67296
Theoretical pI: Translated: 7.42; Mature: 7.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLNPQISTDKNQRQSAKNLFWQGWAVREISQHLQLPESTVSSWKKRDAWEDAKPIDRVD CCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHH SALEMRMLQLINKEDKDGKDFKEIDLLGRQLERIARITRYHNGGNEADLNPNVQNRNAGP HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC KKPPVKNHVSEEDLEKLIEAFQGSMFAYQKEWYTAGLTQRIRNILKSRQIGATYFFAHEA CCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH IIDALLTGRNQIFLSASKAQAHVFKQYIIQFVKDVTGIELKGDPIVLFNGAILYFLGTNA HHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCEECCCCEEEECCEEEEEECCCC RTAQSYHGNLYLDEYFWIHKFQEFRKVASGMAIHAKWRQTYISTPSSITHDAYPFWTGTL CCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCEEEEHHHHHHCCCCCCCCCCCCCCEECHH FNRGRPKADRIEIDVSHSALANGRRCEDGQWRQVVTVDDAIRKGCNLFDPDTLHLEYSPD HCCCCCCCCEEEEEECHHHHCCCCCCCCCCCEEEEEHHHHHHCCCCCCCCCEEEEEECCC EYSNLLMCEFIDDTMSVFPMVMMQRCMVDSWEVWTDYKPFAPRPLAHREVWIGYDPNKGG HHCCEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCEEEEEECCCCCC KGDSAGCIVICPPAVPGGKFRVIEKHRWNGMDFEAQAKAIQDICNKYNVTFIGIDTTGLG CCCCCCEEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCHH EAVYQLVKKFFPQVTPFLYNPVLKSQMVIKAYDVISKGRLEYDAGWTDLAQAFMSIRKTL HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHH TASGKQVTYESARSEEISHADIAWAAMHALYNEPLDTSGTSTSTLEIYD HCCCCEEEHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEC >Mature Secondary Structure MKLNPQISTDKNQRQSAKNLFWQGWAVREISQHLQLPESTVSSWKKRDAWEDAKPIDRVD CCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHH SALEMRMLQLINKEDKDGKDFKEIDLLGRQLERIARITRYHNGGNEADLNPNVQNRNAGP HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC KKPPVKNHVSEEDLEKLIEAFQGSMFAYQKEWYTAGLTQRIRNILKSRQIGATYFFAHEA CCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH IIDALLTGRNQIFLSASKAQAHVFKQYIIQFVKDVTGIELKGDPIVLFNGAILYFLGTNA HHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCEECCCCEEEECCEEEEEECCCC RTAQSYHGNLYLDEYFWIHKFQEFRKVASGMAIHAKWRQTYISTPSSITHDAYPFWTGTL CCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCEEEEHHHHHHCCCCCCCCCCCCCCEECHH FNRGRPKADRIEIDVSHSALANGRRCEDGQWRQVVTVDDAIRKGCNLFDPDTLHLEYSPD HCCCCCCCCEEEEEECHHHHCCCCCCCCCCCEEEEEHHHHHHCCCCCCCCCEEEEEECCC EYSNLLMCEFIDDTMSVFPMVMMQRCMVDSWEVWTDYKPFAPRPLAHREVWIGYDPNKGG HHCCEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCEEEEEECCCCCC KGDSAGCIVICPPAVPGGKFRVIEKHRWNGMDFEAQAKAIQDICNKYNVTFIGIDTTGLG CCCCCCEEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCHH EAVYQLVKKFFPQVTPFLYNPVLKSQMVIKAYDVISKGRLEYDAGWTDLAQAFMSIRKTL HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHH TASGKQVTYESARSEEISHADIAWAAMHALYNEPLDTSGTSTSTLEIYD HCCCCEEEHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA