| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876020
Identifier: 160876020
GI number: 160876020
Start: 3457681
End: 3458058
Strand: Reverse
Name: 160876020
Synonym: Sbal195_2910
Alternate gene names: NA
Gene position: 3458058-3457681 (Counterclockwise)
Preceding gene: 160876021
Following gene: 160876019
Centisome position: 64.67
GC content: 52.65
Gene sequence:
>378_bases ATGAGCGAGCCAATTTCAGCGACATCAGCCACATCTGCAGTCGTCACCGCCAGCGTGCTGACATTGGTGCCAGGGGCTGA ACCTGCAGTCATGATCGGCGCGTTTACCGGTGCCGTGTTGTTCATTATTTCGAATGATGCAGCGGGGAATTACCAGCGTA TCGGACTGTTTATTGTGTCATTTTTGGGCGGTGTACTGTGCGCCAATTGGGCCGCTAATGCCTTGAGTGCATTACTGCCA GATGCCTTGCAGGTCAATGTGGGCATGGCGGCACTCATTTCATCCGCCTGTGTCGTGCGCATGCTGCAGTATTTTATGAA ACTCACCAATAACCCAGAAAGTTGGCTTAATGCCCTGCGTGGGCTTAGGGGGAAATGA
Upstream 100 bases:
>100_bases CCGCCATCGGCCCTATATTGCCAAACGGTACGCGAGTACTTCTTCCTGTGCAGGTGGCCGCGCCGACACAGCCAAACTTT ATTCAACTATGGGATTAATG
Downstream 100 bases:
>100_bases TGCTGATCATCAATGCCATTATTTGCAGTTTGATTGTGTTGCGCCTGGCTTTATTTGTACGAACAGGGCGGCATCGAATC TTCATCAGTATTTGCGCCTA
Product: putative phage-like transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 125; Mature: 124
Protein sequence:
>125_residues MSEPISATSATSAVVTASVLTLVPGAEPAVMIGAFTGAVLFIISNDAAGNYQRIGLFIVSFLGGVLCANWAANALSALLP DALQVNVGMAALISSACVVRMLQYFMKLTNNPESWLNALRGLRGK
Sequences:
>Translated_125_residues MSEPISATSATSAVVTASVLTLVPGAEPAVMIGAFTGAVLFIISNDAAGNYQRIGLFIVSFLGGVLCANWAANALSALLP DALQVNVGMAALISSACVVRMLQYFMKLTNNPESWLNALRGLRGK >Mature_124_residues SEPISATSATSAVVTASVLTLVPGAEPAVMIGAFTGAVLFIISNDAAGNYQRIGLFIVSFLGGVLCANWAANALSALLPD ALQVNVGMAALISSACVVRMLQYFMKLTNNPESWLNALRGLRGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12945; Mature: 12814
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPISATSATSAVVTASVLTLVPGAEPAVMIGAFTGAVLFIISNDAAGNYQRIGLFIVS CCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHH FLGGVLCANWAANALSALLPDALQVNVGMAALISSACVVRMLQYFMKLTNNPESWLNALR HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH GLRGK CCCCC >Mature Secondary Structure SEPISATSATSAVVTASVLTLVPGAEPAVMIGAFTGAVLFIISNDAAGNYQRIGLFIVS CCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHH FLGGVLCANWAANALSALLPDALQVNVGMAALISSACVVRMLQYFMKLTNNPESWLNALR HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH GLRGK CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA