| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876013
Identifier: 160876013
GI number: 160876013
Start: 3452646
End: 3454007
Strand: Direct
Name: 160876013
Synonym: Sbal195_2903
Alternate gene names: NA
Gene position: 3452646-3454007 (Clockwise)
Preceding gene: 160875996
Following gene: 160876014
Centisome position: 64.57
GC content: 37.67
Gene sequence:
>1362_bases ATGAATATTCAAAACTTGAAGATTCACAATTTCAGAAGTATCTCAAAGCTCGACTTGAACTTGGGTACTGAAAACAGAGT TGTGTGTTTTGTTGGTGAGAATGGTAGTGCAAAGACATCGATTTTGAGTCTTATTGCAGAGGCGATAGTATCTAAGACAA AGCTAAAGTTTCCCGACTTTTCTCCAACTCAACACAATGGCAAAAGATATCGAATGATGTGTAAATCTGAAATAAATAGG GACAGCAATTTTTATTCGGTAGAGCTAAACTATTCAAACATTGAAAATCAGTCTTACCAATTTAAAAAGCTTGTAGGGCG GCAGAAAAACCTTCCTGTAACTGAATATCAGGACGTAATTCAGGGGATCAGCTTAACACATGAATATTATTCAGAATACT CGAGTTTATCTAACTTAGAGTATAGTAAGGATTATCTTGCATCAAATATATTTCTTATTAGGCCGAGCACAAGATACGAG AAGGATCGCTTTGAAGTTTCTGAAGCTGATACCAAAACACCCTCGTATTCTGTGGGTGAGCAATACAAGAGCGAAATGCC ATACCCCTTTACAGTATCGCATGCAGGAGAAAATATTCAGTCAATTGTTCTTGATATGATTTTCGATGCAACAATTGGTT ATAACGATGCGGGTCTTGCCTTCTCAAAAATTACTCATATATTAAAGCAGATTACAGGTAAGGAATTCGGTAACTTACAA GTCTCACAGTCACCTTATAGACAGGTAGTATCTTCGAGTATTGGACCAATAAGCTCTTTCTCTCAAGGTGAGCTAGATCT ACTTGTTACAGTGGCTTCGATTCTTTCTAGGCAACTATTTCATTTCAGATACTACACCGAGGACCAAAAGAAAGACTCAG GATTGAATACCTTATTCGATATACCCGGTATTGTTTTGGTTGATGAGATAGATCTGCATCTTCACCCAAGAGCCCAAGAA AGTTACATAAAAACACTTACAGATATATTCCCTAATATTCAATTCATTATTACCACTCATAGCCCTTTCGTAGTCCGAGG GCTTCCAAACCATTCAAAAGTTGTCAACTTACCATCAGGTAGAGTGTTTGACGAGAACTTCAAAGCAATGGATATAGATA GTATTACTAATATCATTTTTGGCTACGATGGTGGTTTTTCTGAGGCAGTAAAAGATAAGCTGAGTCAGTTTAAGAACGCG CTAGTGTTAGAAGACCCGGATGTTCAGTTGTTGCAGGAGTTGTATAGTGAGTTATCTTCATCAGGCTCAGCAAAAGAGGA GTTGTTGTTGTATCTCGCTTCATATGCTGATGAGAAGTTAATTAATACAGTGAAGGGAAAGGCAGATGCGGAAAGTAGAT AG
Upstream 100 bases:
>100_bases CAGTAAATCGCAATGGAGGTATCGATTTTATTTATAAAGTTAGACTAAACCCACTTTGTTTTGCTAATGTGCAATCAATT GATTTATATGGATAACAATA
Downstream 100 bases:
>100_bases AGCCTCAGTTCCTTTTCCAAATAGACTACTACAGCAAAATATGACAGCAGAAAATTTATCCCATTTAGCAAACTATAAGC AGATTAATAATAGCATCTAC
Product: ATP-binding protein involved in virulence-like protein
Products: NA
Alternate protein names: SMC Domain Protein; AAA ATPase
Number of amino acids: Translated: 453; Mature: 453
Protein sequence:
>453_residues MNIQNLKIHNFRSISKLDLNLGTENRVVCFVGENGSAKTSILSLIAEAIVSKTKLKFPDFSPTQHNGKRYRMMCKSEINR DSNFYSVELNYSNIENQSYQFKKLVGRQKNLPVTEYQDVIQGISLTHEYYSEYSSLSNLEYSKDYLASNIFLIRPSTRYE KDRFEVSEADTKTPSYSVGEQYKSEMPYPFTVSHAGENIQSIVLDMIFDATIGYNDAGLAFSKITHILKQITGKEFGNLQ VSQSPYRQVVSSSIGPISSFSQGELDLLVTVASILSRQLFHFRYYTEDQKKDSGLNTLFDIPGIVLVDEIDLHLHPRAQE SYIKTLTDIFPNIQFIITTHSPFVVRGLPNHSKVVNLPSGRVFDENFKAMDIDSITNIIFGYDGGFSEAVKDKLSQFKNA LVLEDPDVQLLQELYSELSSSGSAKEELLLYLASYADEKLINTVKGKADAESR
Sequences:
>Translated_453_residues MNIQNLKIHNFRSISKLDLNLGTENRVVCFVGENGSAKTSILSLIAEAIVSKTKLKFPDFSPTQHNGKRYRMMCKSEINR DSNFYSVELNYSNIENQSYQFKKLVGRQKNLPVTEYQDVIQGISLTHEYYSEYSSLSNLEYSKDYLASNIFLIRPSTRYE KDRFEVSEADTKTPSYSVGEQYKSEMPYPFTVSHAGENIQSIVLDMIFDATIGYNDAGLAFSKITHILKQITGKEFGNLQ VSQSPYRQVVSSSIGPISSFSQGELDLLVTVASILSRQLFHFRYYTEDQKKDSGLNTLFDIPGIVLVDEIDLHLHPRAQE SYIKTLTDIFPNIQFIITTHSPFVVRGLPNHSKVVNLPSGRVFDENFKAMDIDSITNIIFGYDGGFSEAVKDKLSQFKNA LVLEDPDVQLLQELYSELSSSGSAKEELLLYLASYADEKLINTVKGKADAESR >Mature_453_residues MNIQNLKIHNFRSISKLDLNLGTENRVVCFVGENGSAKTSILSLIAEAIVSKTKLKFPDFSPTQHNGKRYRMMCKSEINR DSNFYSVELNYSNIENQSYQFKKLVGRQKNLPVTEYQDVIQGISLTHEYYSEYSSLSNLEYSKDYLASNIFLIRPSTRYE KDRFEVSEADTKTPSYSVGEQYKSEMPYPFTVSHAGENIQSIVLDMIFDATIGYNDAGLAFSKITHILKQITGKEFGNLQ VSQSPYRQVVSSSIGPISSFSQGELDLLVTVASILSRQLFHFRYYTEDQKKDSGLNTLFDIPGIVLVDEIDLHLHPRAQE SYIKTLTDIFPNIQFIITTHSPFVVRGLPNHSKVVNLPSGRVFDENFKAMDIDSITNIIFGYDGGFSEAVKDKLSQFKNA LVLEDPDVQLLQELYSELSSSGSAKEELLLYLASYADEKLINTVKGKADAESR
Specific function: Unknown
COG id: COG3950
COG function: function code R; Predicted ATP-binding protein involved in virulence
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51220; Mature: 51220
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIQNLKIHNFRSISKLDLNLGTENRVVCFVGENGSAKTSILSLIAEAIVSKTKLKFPDF CCCCCEEECCCCCCEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCC SPTQHNGKRYRMMCKSEINRDSNFYSVELNYSNIENQSYQFKKLVGRQKNLPVTEYQDVI CCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHCCCCCCCHHHHHHHH QGISLTHEYYSEYSSLSNLEYSKDYLASNIFLIRPSTRYEKDRFEVSEADTKTPSYSVGE HHHHHHHHHHHHHHHHCCCCHHHHHHHCCEEEECCCCCCCHHHHCCCCCCCCCCCCCHHH QYKSEMPYPFTVSHAGENIQSIVLDMIFDATIGYNDAGLAFSKITHILKQITGKEFGNLQ HHHHCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEE VSQSPYRQVVSSSIGPISSFSQGELDLLVTVASILSRQLFHFRYYTEDQKKDSGLNTLFD ECCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHC IPGIVLVDEIDLHLHPRAQESYIKTLTDIFPNIQFIITTHSPFVVRGLPNHSKVVNLPSG CCCEEEEEEECEEECCCHHHHHHHHHHHHCCCEEEEEEECCCEEEECCCCCCEEEECCCC RVFDENFKAMDIDSITNIIFGYDGGFSEAVKDKLSQFKNALVLEDPDVQLLQELYSELSS CEECCCCCEEEHHHHHHHHEECCCCHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHC SGSAKEELLLYLASYADEKLINTVKGKADAESR CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MNIQNLKIHNFRSISKLDLNLGTENRVVCFVGENGSAKTSILSLIAEAIVSKTKLKFPDF CCCCCEEECCCCCCEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCC SPTQHNGKRYRMMCKSEINRDSNFYSVELNYSNIENQSYQFKKLVGRQKNLPVTEYQDVI CCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHCCCCCCCHHHHHHHH QGISLTHEYYSEYSSLSNLEYSKDYLASNIFLIRPSTRYEKDRFEVSEADTKTPSYSVGE HHHHHHHHHHHHHHHHCCCCHHHHHHHCCEEEECCCCCCCHHHHCCCCCCCCCCCCCHHH QYKSEMPYPFTVSHAGENIQSIVLDMIFDATIGYNDAGLAFSKITHILKQITGKEFGNLQ HHHHCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEE VSQSPYRQVVSSSIGPISSFSQGELDLLVTVASILSRQLFHFRYYTEDQKKDSGLNTLFD ECCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHC IPGIVLVDEIDLHLHPRAQESYIKTLTDIFPNIQFIITTHSPFVVRGLPNHSKVVNLPSG CCCEEEEEEECEEECCCHHHHHHHHHHHHCCCEEEEEEECCCEEEECCCCCCEEEECCCC RVFDENFKAMDIDSITNIIFGYDGGFSEAVKDKLSQFKNALVLEDPDVQLLQELYSELSS CEECCCCCEEEHHHHHHHHEECCCCHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHC SGSAKEELLLYLASYADEKLINTVKGKADAESR CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA