| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876007
Identifier: 160876007
GI number: 160876007
Start: 3447889
End: 3449121
Strand: Reverse
Name: 160876007
Synonym: Sbal195_2897
Alternate gene names: NA
Gene position: 3449121-3447889 (Counterclockwise)
Preceding gene: 160876008
Following gene: 160876006
Centisome position: 64.5
GC content: 51.66
Gene sequence:
>1233_bases ATGAGCTCGATTGCTGAAGAAATTGCGGGGCTAAAAGTCGCGTCCGCAACACAAACTGCCGCATCACAGGCGTTATCGCA AGAAGTCGCTGGCAAGATGGCGGCTATCGATAAAAAAACCAATGACTCCATTGCTAAGGTCGAATTAACCTATGACCAAA AAGCGGCCGGACTGACCATTATCGCCACCGACGGCTACAAAAAAGCTATCGAGCACAATTCTGGCGGTCGCAATACCGTT GTGTATGACGCTCAGGGTAACCCTAATATCATGGTCGTGATCCCGCGCTTCAACATCGAGGATTTGGGATTAACTGACCT AAACCTTGGCACTGGGGTTCACCCTGCGTTCCAGACTAACGGCGTACCCCGCGGCGAGATATTAATCGGTAAGTATTTAG CTTCAACAGCTGCCAATGGTAGCGCAGTCATTGGTGGCGTACAGCCGCGCACATCCGTTAACTACGATGCAGCAAAAGAG TTGTGTACGCGCAAAGGCGCAAATTGGCACATGATGTCAGTGCATGAATGGGCTGCTATTGCGCTATGGTCTCTCGCCAA CGGCACTGTACCGCGCGGCAATACAAACTATGGTCGCTCGCACGAGAAGAAATGGGAAACCGCGCGGCGCTCTGATAATG GTGCACCCGGGGATGTGAGTGGTACTGGTAGGACTGACACTGGCAAAGGGCCTACTGCTTGGAATCATGACCATACTAAT TTTGGTGTGTGTGATTTAGTGGGCAACGTCTGGGAATGGTTAGATCAAATGAAGTTAGACGATGGTCAGATTATTACTAC GTTGGATAATAACCCCACCGTCGCTGAAGCAAACTGGCACAAACACGCTGCTTATTTTGATTCACCTACTGATAACCAAA CCGGCACGGGCAGCGCTGGTGCGCCCATCCTCAGCAATGCAGTGACTAAGCGCAACGGTCCGATGAATGATGAGTCAAAC GATTACCCATACTTAACCGCATCCCACTTTGCGGCCATCACCAAAGCTGTGGGCTATGTGCCTAATGAGCTATTGCGCAA GCTGTTAATTGAATCGGCCACTACGGCTACCGTTGGTGGTTACATTTACGCAAGAAACTACGGTGATCGGTTCCCTGTCC GCGGTGGCTACTGGAGCAACGGCACGAACGCTGGACTGGGTGCGCTCGTCTTGAGCGGTACGCGCTCGAGTGCGGACAGC AGCATCGGTTTCCGTCCAGCTTTCTTTGTGTAG
Upstream 100 bases:
>100_bases CGGGCTGTACGGCATTTTTACAAAATGCGGCGGCAGTTATTAAAAATGCTCACTGGAACATGCAACTCAGTGAGCGCATT AGACAACTAGAGGGATAATT
Downstream 100 bases:
>100_bases TGAAGCCTGATTCTTTGTGTGCTGCATTTATTTTTCAAGAAGGCGCAGCTATTGACTCATTATTGGCGGCAGATTGACCG CCTTACTTATCGAAGATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 410; Mature: 409
Protein sequence:
>410_residues MSSIAEEIAGLKVASATQTAASQALSQEVAGKMAAIDKKTNDSIAKVELTYDQKAAGLTIIATDGYKKAIEHNSGGRNTV VYDAQGNPNIMVVIPRFNIEDLGLTDLNLGTGVHPAFQTNGVPRGEILIGKYLASTAANGSAVIGGVQPRTSVNYDAAKE LCTRKGANWHMMSVHEWAAIALWSLANGTVPRGNTNYGRSHEKKWETARRSDNGAPGDVSGTGRTDTGKGPTAWNHDHTN FGVCDLVGNVWEWLDQMKLDDGQIITTLDNNPTVAEANWHKHAAYFDSPTDNQTGTGSAGAPILSNAVTKRNGPMNDESN DYPYLTASHFAAITKAVGYVPNELLRKLLIESATTATVGGYIYARNYGDRFPVRGGYWSNGTNAGLGALVLSGTRSSADS SIGFRPAFFV
Sequences:
>Translated_410_residues MSSIAEEIAGLKVASATQTAASQALSQEVAGKMAAIDKKTNDSIAKVELTYDQKAAGLTIIATDGYKKAIEHNSGGRNTV VYDAQGNPNIMVVIPRFNIEDLGLTDLNLGTGVHPAFQTNGVPRGEILIGKYLASTAANGSAVIGGVQPRTSVNYDAAKE LCTRKGANWHMMSVHEWAAIALWSLANGTVPRGNTNYGRSHEKKWETARRSDNGAPGDVSGTGRTDTGKGPTAWNHDHTN FGVCDLVGNVWEWLDQMKLDDGQIITTLDNNPTVAEANWHKHAAYFDSPTDNQTGTGSAGAPILSNAVTKRNGPMNDESN DYPYLTASHFAAITKAVGYVPNELLRKLLIESATTATVGGYIYARNYGDRFPVRGGYWSNGTNAGLGALVLSGTRSSADS SIGFRPAFFV >Mature_409_residues SSIAEEIAGLKVASATQTAASQALSQEVAGKMAAIDKKTNDSIAKVELTYDQKAAGLTIIATDGYKKAIEHNSGGRNTVV YDAQGNPNIMVVIPRFNIEDLGLTDLNLGTGVHPAFQTNGVPRGEILIGKYLASTAANGSAVIGGVQPRTSVNYDAAKEL CTRKGANWHMMSVHEWAAIALWSLANGTVPRGNTNYGRSHEKKWETARRSDNGAPGDVSGTGRTDTGKGPTAWNHDHTNF GVCDLVGNVWEWLDQMKLDDGQIITTLDNNPTVAEANWHKHAAYFDSPTDNQTGTGSAGAPILSNAVTKRNGPMNDESND YPYLTASHFAAITKAVGYVPNELLRKLLIESATTATVGGYIYARNYGDRFPVRGGYWSNGTNAGLGALVLSGTRSSADSS IGFRPAFFV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43640; Mature: 43509
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSIAEEIAGLKVASATQTAASQALSQEVAGKMAAIDKKTNDSIAKVELTYDQKAAGLTI CCHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCEEE IATDGYKKAIEHNSGGRNTVVYDAQGNPNIMVVIPRFNIEDLGLTDLNLGTGVHPAFQTN EEECCHHHHHHCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCEEECCCCCCCCHHHCC GVPRGEILIGKYLASTAANGSAVIGGVQPRTSVNYDAAKELCTRKGANWHMMSVHEWAAI CCCCCCEEEHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEHHHHHHH ALWSLANGTVPRGNTNYGRSHEKKWETARRSDNGAPGDVSGTGRTDTGKGPTAWNHDHTN HHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC FGVCDLVGNVWEWLDQMKLDDGQIITTLDNNPTVAEANWHKHAAYFDSPTDNQTGTGSAG CHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEECCCCCCEEECCCCCCCCCCCCCCC APILSNAVTKRNGPMNDESNDYPYLTASHFAAITKAVGYVPNELLRKLLIESATTATVGG CCHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEECC YIYARNYGDRFPVRGGYWSNGTNAGLGALVLSGTRSSADSSIGFRPAFFV EEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEECC >Mature Secondary Structure SSIAEEIAGLKVASATQTAASQALSQEVAGKMAAIDKKTNDSIAKVELTYDQKAAGLTI CHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCEEE IATDGYKKAIEHNSGGRNTVVYDAQGNPNIMVVIPRFNIEDLGLTDLNLGTGVHPAFQTN EEECCHHHHHHCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCEEECCCCCCCCHHHCC GVPRGEILIGKYLASTAANGSAVIGGVQPRTSVNYDAAKELCTRKGANWHMMSVHEWAAI CCCCCCEEEHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEHHHHHHH ALWSLANGTVPRGNTNYGRSHEKKWETARRSDNGAPGDVSGTGRTDTGKGPTAWNHDHTN HHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC FGVCDLVGNVWEWLDQMKLDDGQIITTLDNNPTVAEANWHKHAAYFDSPTDNQTGTGSAG CHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEECCCCCCEEECCCCCCCCCCCCCCC APILSNAVTKRNGPMNDESNDYPYLTASHFAAITKAVGYVPNELLRKLLIESATTATVGG CCHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEECC YIYARNYGDRFPVRGGYWSNGTNAGLGALVLSGTRSSADSSIGFRPAFFV EEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA