| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is 160876004
Identifier: 160876004
GI number: 160876004
Start: 3445664
End: 3446179
Strand: Reverse
Name: 160876004
Synonym: Sbal195_2894
Alternate gene names: NA
Gene position: 3446179-3445664 (Counterclockwise)
Preceding gene: 160876005
Following gene: 160876003
Centisome position: 64.45
GC content: 50.58
Gene sequence:
>516_bases ATGGCTTTACCAAGAAAACTCAAGCACCTGAACCTATTCGGTGATGGTCAAAACTGGATAGGTGTGGCGGAAGAATTTAC CCCCGCCAAACTAAGCCGCAAATTTGAAAAATACCGTGGCAGCGGCATGCCCGGTGCAGCTGATATCGATATGGGGCTGG ATGATGATGCCTTAGGTGTTGAATTCACTTTAGGCGGCTATGAAGCCCAGCTCGTTAAGCAGATGTCGGCCAGCAAGATT GACGGTGTTCAGCTGCGTTTTGCGGGTTCATTCCAGCGCGACGACACCGGTGAAGTGCAAGCCGTCGAAATCGTATGCCG TGGCCGTTACAAAGAGCTTGATCGCGGCAGTTACAAAACCGGCGACAACAGCCAAACCAAAGCCACTATGACGTGCACTT ACTACAAAGAAACGGCAGGCGGCGAAGTGCTAGTTGAAGTTGATACCGTTAACGGCATTGAGATCATCAATGGCGTTGAC ATGATGGCAGAACACCGCAAAGCCATCGGGTTATAA
Upstream 100 bases:
>100_bases CCCAGTGCCTCCGCTGGAAGATTTAACCTTCCGTCAAAAAATTACCGACCGTTATTTGGTCGACTTCGCGTCCGCAGTCG CTGCGGCCTAAGGATAACCC
Downstream 100 bases:
>100_bases CTCGGGCTTAAAGCGTTAATACCAATCTTAGCCCGCAATACATAGCCGTATGCGGGCATTTTTTAATTAGGCGGCACCGG GCATCCTGCCCTCAAGCCGC
Product: phage major tail tube protein
Products: NA
Alternate protein names: Tail Tube Protein; Phage Tail Tube Protein FII; Phage-Related Tail Tube Protein; Tail Fiber Component Of Prophage; Phage Tail Tube Protein; Tail Tube Protein FII; Pyocin R2_PP Tail Tube Protein GpFII; Phage-Related Tail Protein; Prophage Tail Tube Protein; Phage P2 FII-Like Protein; Bacteriophage Tail Tube Protein FII; Bacteriophage-Related Tail Tube FII Protein; Phage Tail Fiber Component; Bacteriophage P2 Tail Sheath Protein GPFII; Phage Tail Protein; Contractile Tail Tube Protein; Phage Tail Tube-Like Protein; Phage Protein; Pyocin R2_PP Tail Tube Protein; Tail Tube Protein Prophage
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MALPRKLKHLNLFGDGQNWIGVAEEFTPAKLSRKFEKYRGSGMPGAADIDMGLDDDALGVEFTLGGYEAQLVKQMSASKI DGVQLRFAGSFQRDDTGEVQAVEIVCRGRYKELDRGSYKTGDNSQTKATMTCTYYKETAGGEVLVEVDTVNGIEIINGVD MMAEHRKAIGL
Sequences:
>Translated_171_residues MALPRKLKHLNLFGDGQNWIGVAEEFTPAKLSRKFEKYRGSGMPGAADIDMGLDDDALGVEFTLGGYEAQLVKQMSASKI DGVQLRFAGSFQRDDTGEVQAVEIVCRGRYKELDRGSYKTGDNSQTKATMTCTYYKETAGGEVLVEVDTVNGIEIINGVD MMAEHRKAIGL >Mature_170_residues ALPRKLKHLNLFGDGQNWIGVAEEFTPAKLSRKFEKYRGSGMPGAADIDMGLDDDALGVEFTLGGYEAQLVKQMSASKID GVQLRFAGSFQRDDTGEVQAVEIVCRGRYKELDRGSYKTGDNSQTKATMTCTYYKETAGGEVLVEVDTVNGIEIINGVDM MAEHRKAIGL
Specific function: Unknown
COG id: COG3498
COG function: function code R; Phage tail tube protein FII
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18722; Mature: 18591
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALPRKLKHLNLFGDGQNWIGVAEEFTPAKLSRKFEKYRGSGMPGAADIDMGLDDDALGV CCCCCCCCEEEEEECCCCCEECCCCCCHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCEE EFTLGGYEAQLVKQMSASKIDGVQLRFAGSFQRDDTGEVQAVEIVCRGRYKELDRGSYKT EEEECCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCHHCCCCCCCC GDNSQTKATMTCTYYKETAGGEVLVEVDTVNGIEIINGVDMMAEHRKAIGL CCCCCCEEEEEEEEEEECCCCEEEEEEECCCCEEEECCHHHHHHHHHHCCC >Mature Secondary Structure ALPRKLKHLNLFGDGQNWIGVAEEFTPAKLSRKFEKYRGSGMPGAADIDMGLDDDALGV CCCCCCCEEEEEECCCCCEECCCCCCHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCEE EFTLGGYEAQLVKQMSASKIDGVQLRFAGSFQRDDTGEVQAVEIVCRGRYKELDRGSYKT EEEECCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCHHCCCCCCCC GDNSQTKATMTCTYYKETAGGEVLVEVDTVNGIEIINGVDMMAEHRKAIGL CCCCCCEEEEEEEEEEECCCCEEEEEEECCCCEEEECCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA