| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876000
Identifier: 160876000
GI number: 160876000
Start: 3440980
End: 3441429
Strand: Reverse
Name: 160876000
Synonym: Sbal195_2890
Alternate gene names: NA
Gene position: 3441429-3440980 (Counterclockwise)
Preceding gene: 160876001
Following gene: 160875999
Centisome position: 64.36
GC content: 50.44
Gene sequence:
>450_bases ATGATGATGACACTCGGTTTTTTTGTATTTAGCAGGCTAACTGTGCCGTACCAAACATCGCAGCATGACATGGTATGGCG CCATCCAACCAATAGCCGCGTGGGTGCGCGTCCATCCGCGCAGTTCTTAGGTGTAGGCGATGAAACACTGACGTTATCTG GTGTGCTAATGCCAGAAATAACGGGTGGAGAGCTCAGCCTCGAGGCGCTGCGTAAAATGGCCGACACCGGCAAAGCCTAT CCACTTATCGAAGGGCGCGGCACTGTGACAGGTTTTTTCGTGATCGAGAAAATCAGCAAAGGCCGCAGTGAGTTTTTTAG TGACGGTGCAGCGAGGAAGATTGAATTTACCATTGAGCTAAAACGGGTGGATGAAAAGAATACTAGCCTCATCGCGAACG AGAACCTGATCGGCATGGGCATCAGCAAACTGGTAAGGGGGATTTTGTGA
Upstream 100 bases:
>100_bases ATACACAGGATGTTGCGCGGTTAATCGCCATCGAACTAGAAAAGCGTGAACGTGCTCAGCAGGCACGCCTTCGCAGCAGC CTTAAGGACCTTAACTAATT
Downstream 100 bases:
>100_bases ACCTACTCGAGCAGTTTAACCAGCTGGCATCGAGCGACCAGCCCACGCCAGACTATCAAATATTGGTCAATGGCAAAGAC ATCAGCCCCAAAGTGAAAAC
Product: P2 GpU family protein
Products: NA
Alternate protein names: Phage Tail Protein; Phage P2 GpU; Phage P2 GpU Family Protein; Phage-Related Tail Protein; Phage Protein U; Phage Tail Protein U; Fels-2 Prophage Protein; Tail Fiber Protein; Phage-Related Protein; Phage Tail Assembly Protein; Bacteriophage Tail Fiber Protein U; Bacteriophage Tail Protein U; Phage P2 GpU Protein; Prophage Tail Protein; Phage-Like Tail Protein; Bacteriophage P2 Phage-Related Tail U Protein; Tail Assembly Protein; Bacteriophage Tail Protein; Tail Fiber Protein Of Prophage; Bacteriophage P2 Tail Protein GPU; Phage Tail; Tail Protein; Tail Protein U
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MMMTLGFFVFSRLTVPYQTSQHDMVWRHPTNSRVGARPSAQFLGVGDETLTLSGVLMPEITGGELSLEALRKMADTGKAY PLIEGRGTVTGFFVIEKISKGRSEFFSDGAARKIEFTIELKRVDEKNTSLIANENLIGMGISKLVRGIL
Sequences:
>Translated_149_residues MMMTLGFFVFSRLTVPYQTSQHDMVWRHPTNSRVGARPSAQFLGVGDETLTLSGVLMPEITGGELSLEALRKMADTGKAY PLIEGRGTVTGFFVIEKISKGRSEFFSDGAARKIEFTIELKRVDEKNTSLIANENLIGMGISKLVRGIL >Mature_149_residues MMMTLGFFVFSRLTVPYQTSQHDMVWRHPTNSRVGARPSAQFLGVGDETLTLSGVLMPEITGGELSLEALRKMADTGKAY PLIEGRGTVTGFFVIEKISKGRSEFFSDGAARKIEFTIELKRVDEKNTSLIANENLIGMGISKLVRGIL
Specific function: Unknown
COG id: COG3499
COG function: function code R; Phage protein U
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16430; Mature: 16430
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMMTLGFFVFSRLTVPYQTSQHDMVWRHPTNSRVGARPSAQFLGVGDETLTLSGVLMPEI CEEEHHHHHHHHCCCCEECCCCCEEEECCCCCCCCCCCCCEEEECCCCEEEEEEEEECCC TGGELSLEALRKMADTGKAYPLIEGRGTVTGFFVIEKISKGRSEFFSDGAARKIEFTIEL CCCCCCHHHHHHHHHCCCCCEEEECCCCEEEHHEEEHHHCCHHHHHCCCCCEEEEEEEEE KRVDEKNTSLIANENLIGMGISKLVRGIL EECCCCCCEEEECCCEEECCHHHHHHHCC >Mature Secondary Structure MMMTLGFFVFSRLTVPYQTSQHDMVWRHPTNSRVGARPSAQFLGVGDETLTLSGVLMPEI CEEEHHHHHHHHCCCCEECCCCCEEEECCCCCCCCCCCCCEEEECCCCEEEEEEEEECCC TGGELSLEALRKMADTGKAYPLIEGRGTVTGFFVIEKISKGRSEFFSDGAARKIEFTIEL CCCCCCHHHHHHHHHCCCCCEEEECCCCEEEHHEEEHHHCCHHHHHCCCCCEEEEEEEEE KRVDEKNTSLIANENLIGMGISKLVRGIL EECCCCCCEEEECCCEEECCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA