| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yaeQ [H]
Identifier: 160875985
GI number: 160875985
Start: 3428384
End: 3428929
Strand: Reverse
Name: yaeQ [H]
Synonym: Sbal195_2875
Alternate gene names: 160875985
Gene position: 3428929-3428384 (Counterclockwise)
Preceding gene: 160875986
Following gene: 160875983
Centisome position: 64.12
GC content: 47.8
Gene sequence:
>546_bases ATGGCCCTCAAAGCGACCGTGTTTAAGGTCAATTTACAGATAGCCGATATGGATCGGAATTATTACCAAGACCATCAATT GACGCTTGCCCAGCATCCTTCCGAAACCGATGGCCGCATGATGGTGCGTTTACTGGCGTTTATTGTGAATGCCAGCGAAA CCTTAAGTTTCAGTAAAGGTTTGTGCGTCGATGACGAGCCCGAGTTGTGGGACAAAACCTTATCAGGCGAAATTGATCTG TGGGTTGAGTTTGGTCAGGCCGATGAGAAATGGCTGCGAAAGGCCAGTGGCCGTGCCAAAGTTGTGCAGTTATTTACCTA TGGTGGCCGTAGTGTACCCATTTGGTGGAAACAGAATCAGCAGGCGTTAGAGCGTTACCAGAATTTAACCGTGTGGAATA TTGCCGAAGAGTCGGTCACGGCGATGGAAGCCTTTGTTGGGCGCAATATGGCATTGCAGGTTTCTATCAGCGAAGGCCAA ATTTGGCTATCGGATAATGAGACCAGCGTGTTGATCGAACCTGAAATCCTCAAAGATATTGCATAA
Upstream 100 bases:
>100_bases GTCTCAGGTAGACTCGGCAGCCTTATTTTAGGATTTCGCTGTTTCAGGATTTCACTCTGCATTTACTGCATTTACTGCAT TTACTGCATTTAGGATGACT
Downstream 100 bases:
>100_bases CATGTCTTGTAAAAAAGAGCCTGCGATTGCAGGCTCTTTTCATTTATTACTTTCATTTCTCAGTAAGCGTATCGATTTGG ATTTATTGGAAGCTCAGCTC
Product: YaeQ family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MALKATVFKVNLQIADMDRNYYQDHQLTLAQHPSETDGRMMVRLLAFIVNASETLSFSKGLCVDDEPELWDKTLSGEIDL WVEFGQADEKWLRKASGRAKVVQLFTYGGRSVPIWWKQNQQALERYQNLTVWNIAEESVTAMEAFVGRNMALQVSISEGQ IWLSDNETSVLIEPEILKDIA
Sequences:
>Translated_181_residues MALKATVFKVNLQIADMDRNYYQDHQLTLAQHPSETDGRMMVRLLAFIVNASETLSFSKGLCVDDEPELWDKTLSGEIDL WVEFGQADEKWLRKASGRAKVVQLFTYGGRSVPIWWKQNQQALERYQNLTVWNIAEESVTAMEAFVGRNMALQVSISEGQ IWLSDNETSVLIEPEILKDIA >Mature_180_residues ALKATVFKVNLQIADMDRNYYQDHQLTLAQHPSETDGRMMVRLLAFIVNASETLSFSKGLCVDDEPELWDKTLSGEIDLW VEFGQADEKWLRKASGRAKVVQLFTYGGRSVPIWWKQNQQALERYQNLTVWNIAEESVTAMEAFVGRNMALQVSISEGQI WLSDNETSVLIEPEILKDIA
Specific function: Unknown
COG id: COG4681
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786388, Length=170, Percent_Identity=48.8235294117647, Blast_Score=179, Evalue=1e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009822 [H]
Pfam domain/function: PF07152 YaeQ [H]
EC number: NA
Molecular weight: Translated: 20671; Mature: 20540
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALKATVFKVNLQIADMDRNYYQDHQLTLAQHPSETDGRMMVRLLAFIVNASETLSFSKG CCCEEEEEEEEEEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHCCCC LCVDDEPELWDKTLSGEIDLWVEFGQADEKWLRKASGRAKVVQLFTYGGRSVPIWWKQNQ CCCCCCHHHHHHHCCCCEEEEEEECCCHHHHHHHCCCCEEEEEEEECCCCEEEEEECCCH QALERYQNLTVWNIAEESVTAMEAFVGRNMALQVSISEGQIWLSDNETSVLIEPEILKDI HHHHHHHCCEEEEECHHHHHHHHHHHCCCEEEEEEECCCEEEEECCCCEEEECHHHHHHC A C >Mature Secondary Structure ALKATVFKVNLQIADMDRNYYQDHQLTLAQHPSETDGRMMVRLLAFIVNASETLSFSKG CCEEEEEEEEEEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHCCCC LCVDDEPELWDKTLSGEIDLWVEFGQADEKWLRKASGRAKVVQLFTYGGRSVPIWWKQNQ CCCCCCHHHHHHHCCCCEEEEEEECCCHHHHHHHCCCCEEEEEEEECCCCEEEEEECCCH QALERYQNLTVWNIAEESVTAMEAFVGRNMALQVSISEGQIWLSDNETSVLIEPEILKDI HHHHHHHCCEEEEECHHHHHHHHHHHCCCEEEEEEECCCEEEEECCCCEEEECHHHHHHC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]