| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is apr [H]
Identifier: 160875984
GI number: 160875984
Start: 3425842
End: 3428301
Strand: Direct
Name: apr [H]
Synonym: Sbal195_2874
Alternate gene names: 160875984
Gene position: 3425842-3428301 (Clockwise)
Preceding gene: 160875982
Following gene: 160875995
Centisome position: 64.07
GC content: 49.72
Gene sequence:
>2460_bases ATGACAATCAACAGAACCACTAAAATAGCGTTAAGCCTTTCAAGCTTAGCTATTGCGATCTCAGCCGGTGTACAAGCAGC ACCACAAGCCCCAGGTTTTGCCGCAGCATTACAAGCACAAACCTCTCCACTGCCAAAGCGTTACATTGTGAAATTTAAAA ACGCCGATGCAGCGGCCATTATGTCGGCCAGCAATGTGCAATCAATGAGTGATCAGCAATCGAGCGACGCGACAACTGAC GCGCTGCCAAGCACGATGAATTATCAGCCACAAATGGCGGAAATCAGTGCCCAGCACACTGCATTGAACAAAGTGCAAGC GAAGGAAATGAAGCGTATCGGACGCAGTAACAGCTACTCGGTCAAACTCGATGCTAACGGCATCAATACCTTAAAAAAAC GTGCCGATGTGGAATATGTTGAAGAAGACATGCCGCGTCACTTACTGAGTGAAAGCACACCCTGGGGCCAAACCTTTGTG GGGGCGACTCAGCTAAGCGATAGCCAAGCGGGCAACCGCACGATTTGTATTATCGATTCTGGCTACGACCGTAGCCACAG CGAATTAGGTGGCAATAATGTCACGGGTACCAATAACTCAGGTACAGGCAACTGGTTTGAGCCGGGCAACAACAACGCCC ACGGTACTCACGTTGCGGGCACGATTGCGGCGATTGCTAACAATGACGGCGTGATCGGCGTAATGCCAAATCAAACTGCC AATATTCATGTCGTAAAAGTGTTTAACGAATCGGGCTGGGGTTACTCTTCATCCTTAGTGGCCGCAGTAGATACTTGTGT TGCCAACGGCGCTAACGTTGTCACTATGAGTTTAGGTGGCGCGGGTTCCAGCACCACTGAGCGTAACGCTCTGGCTGCAC ATTATAACAATGGTGTGCTCTTGATTGCCGCTGCGGGTAACGCGGGTGACAGCACTCACAGCTACCCTGCATCCTACGAT GGCGTGATGTCTGTTGCCTCTGTGGATAATCATAAAGACCACTCGGCATTTTCCCAATACACCAACCAAGTGGAAATATC TGGCCCAGGTGAAGCGATTCTGTCGACGGTTACCCGTGGCGAAGGCCGTTTAGCCGATATCACTATCGGTGGTCAGTCTT ACTTTGATTCAGGTGTCGTGCCACATAATCGCCTTATTTCATCGGGCGGCAGCTATGTTCCTGCGCCATACAATGGCACA GCGACAGCCACACTTGCCGAATGTAGCGTCAGCGGAACTAGCTTCAACTGCGGCAACATGACCAATAAAATCTGTTTAGT GGAGCGTGTTGGCAATCAAGGCACAAGTTACCCTGAAATCAATGCGGCTAAAGCCTGTAAAAATGCTGGTGCCAGTGCGG CGATTGTTTACAGTAACGCGGCATTACCGGGCTTACAAAACCCCTTCCTTGTCGATGCTAACAGTGAAATCAATATGGTT TCCGTGTCTGTGGATCGCGCAACAGGTTTAGCACTACGTAATCAATTGGGCGCGACAGCAACAGTCAGCAACCAAGGTAA TAAAGATTACGAGTACTACAACGGTACTTCGATGGCGACGCCACATGTGTCAGGTGTTGCAACTTTAGTCTGGAGCTATC ACCCAGAGTGTAGTGCCGCGCAAGTTCGTAACGCATTGAAAATGACCGCCGAAGATCTTGGTACTGCGGGTCGTGACAAC TACTATGGCTATGGTTTAGTCAATGCAGTTGCCGCGAAAACCTTCTTAGATGCCTCTTGTACTGGCCCAACGGGTCCGGT TGATCCAACACCAACCGATGGCGTGTTAGTTAACGGTGTGGCTAAAACAGGCTTAGGCGGCGCAGCGAGTGAAGAACTGC ACTTCTCCTTTGACGTACCACAAGGCGCAACTAATTTAGGCTTTGTAATGAACGGTGGTACAGGTGATGCGGACTTGTAT GTGCAATATGGCGCAGCGCCAACTACAGCTAACTATGATTGTCGTCCGTATAAAAGTGGCAATAGCGAGTCTTGCCCAAT CACCAATATCCAATCAGGCACTTACTACGCCATGCTGAAAGGCTACTCTGCCTTCACTGGTGTGTCGTTAACAGCAAGCT ACACAGCATCTAGCGGCGGAACGCCACCGACTACGCCAGCAAGCTATAGCAACACTGATAACTACAACATCCCTGATAAC AAAGCAGCAGGGATCACTAGCCCAATCACAGTCACTCGCACAGGTGATTCAGGCACTGTGACTGCGGTAGTGAACATAGT CCACCCTTATATTGGTGACTTGAAAGTGCAGCTGATCAGCCCTTCTGGTAAAACAGTTACATTGCATAGCAACACAGGTT CAGGTGCTGCCAATATCAACAAGAGCTATACCGCTGATATGACGGGTGCTAATTCGAACGGCGTATGGAAGTTAAAAGCC GTAGACAGTGGCCGTGGTGATGTGGGTTATATCGATAGCTGGGAGCTGAGCTTCCAATAA
Upstream 100 bases:
>100_bases CGCAGATAGATTCACTAACCGAGTAGCATCTGAGTCGTAGTTATTCTTATGAAACATAAAATAATAATGATTAACACTAA ATTGACCATGGAAGAAGAAC
Downstream 100 bases:
>100_bases ATCCAAATCGATACGCTTACTGAGAAATGAAAGTAATAAATGAAAAGAGCCTGCAATCGCAGGCTCTTTTTTACAAGACA TGTTATGCAATATCTTTGAG
Product: peptidase S8/S53 subtilisin kexin sedolisin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 819; Mature: 818
Protein sequence:
>819_residues MTINRTTKIALSLSSLAIAISAGVQAAPQAPGFAAALQAQTSPLPKRYIVKFKNADAAAIMSASNVQSMSDQQSSDATTD ALPSTMNYQPQMAEISAQHTALNKVQAKEMKRIGRSNSYSVKLDANGINTLKKRADVEYVEEDMPRHLLSESTPWGQTFV GATQLSDSQAGNRTICIIDSGYDRSHSELGGNNVTGTNNSGTGNWFEPGNNNAHGTHVAGTIAAIANNDGVIGVMPNQTA NIHVVKVFNESGWGYSSSLVAAVDTCVANGANVVTMSLGGAGSSTTERNALAAHYNNGVLLIAAAGNAGDSTHSYPASYD GVMSVASVDNHKDHSAFSQYTNQVEISGPGEAILSTVTRGEGRLADITIGGQSYFDSGVVPHNRLISSGGSYVPAPYNGT ATATLAECSVSGTSFNCGNMTNKICLVERVGNQGTSYPEINAAKACKNAGASAAIVYSNAALPGLQNPFLVDANSEINMV SVSVDRATGLALRNQLGATATVSNQGNKDYEYYNGTSMATPHVSGVATLVWSYHPECSAAQVRNALKMTAEDLGTAGRDN YYGYGLVNAVAAKTFLDASCTGPTGPVDPTPTDGVLVNGVAKTGLGGAASEELHFSFDVPQGATNLGFVMNGGTGDADLY VQYGAAPTTANYDCRPYKSGNSESCPITNIQSGTYYAMLKGYSAFTGVSLTASYTASSGGTPPTTPASYSNTDNYNIPDN KAAGITSPITVTRTGDSGTVTAVVNIVHPYIGDLKVQLISPSGKTVTLHSNTGSGAANINKSYTADMTGANSNGVWKLKA VDSGRGDVGYIDSWELSFQ
Sequences:
>Translated_819_residues MTINRTTKIALSLSSLAIAISAGVQAAPQAPGFAAALQAQTSPLPKRYIVKFKNADAAAIMSASNVQSMSDQQSSDATTD ALPSTMNYQPQMAEISAQHTALNKVQAKEMKRIGRSNSYSVKLDANGINTLKKRADVEYVEEDMPRHLLSESTPWGQTFV GATQLSDSQAGNRTICIIDSGYDRSHSELGGNNVTGTNNSGTGNWFEPGNNNAHGTHVAGTIAAIANNDGVIGVMPNQTA NIHVVKVFNESGWGYSSSLVAAVDTCVANGANVVTMSLGGAGSSTTERNALAAHYNNGVLLIAAAGNAGDSTHSYPASYD GVMSVASVDNHKDHSAFSQYTNQVEISGPGEAILSTVTRGEGRLADITIGGQSYFDSGVVPHNRLISSGGSYVPAPYNGT ATATLAECSVSGTSFNCGNMTNKICLVERVGNQGTSYPEINAAKACKNAGASAAIVYSNAALPGLQNPFLVDANSEINMV SVSVDRATGLALRNQLGATATVSNQGNKDYEYYNGTSMATPHVSGVATLVWSYHPECSAAQVRNALKMTAEDLGTAGRDN YYGYGLVNAVAAKTFLDASCTGPTGPVDPTPTDGVLVNGVAKTGLGGAASEELHFSFDVPQGATNLGFVMNGGTGDADLY VQYGAAPTTANYDCRPYKSGNSESCPITNIQSGTYYAMLKGYSAFTGVSLTASYTASSGGTPPTTPASYSNTDNYNIPDN KAAGITSPITVTRTGDSGTVTAVVNIVHPYIGDLKVQLISPSGKTVTLHSNTGSGAANINKSYTADMTGANSNGVWKLKA VDSGRGDVGYIDSWELSFQ >Mature_818_residues TINRTTKIALSLSSLAIAISAGVQAAPQAPGFAAALQAQTSPLPKRYIVKFKNADAAAIMSASNVQSMSDQQSSDATTDA LPSTMNYQPQMAEISAQHTALNKVQAKEMKRIGRSNSYSVKLDANGINTLKKRADVEYVEEDMPRHLLSESTPWGQTFVG ATQLSDSQAGNRTICIIDSGYDRSHSELGGNNVTGTNNSGTGNWFEPGNNNAHGTHVAGTIAAIANNDGVIGVMPNQTAN IHVVKVFNESGWGYSSSLVAAVDTCVANGANVVTMSLGGAGSSTTERNALAAHYNNGVLLIAAAGNAGDSTHSYPASYDG VMSVASVDNHKDHSAFSQYTNQVEISGPGEAILSTVTRGEGRLADITIGGQSYFDSGVVPHNRLISSGGSYVPAPYNGTA TATLAECSVSGTSFNCGNMTNKICLVERVGNQGTSYPEINAAKACKNAGASAAIVYSNAALPGLQNPFLVDANSEINMVS VSVDRATGLALRNQLGATATVSNQGNKDYEYYNGTSMATPHVSGVATLVWSYHPECSAAQVRNALKMTAEDLGTAGRDNY YGYGLVNAVAAKTFLDASCTGPTGPVDPTPTDGVLVNGVAKTGLGGAASEELHFSFDVPQGATNLGFVMNGGTGDADLYV QYGAAPTTANYDCRPYKSGNSESCPITNIQSGTYYAMLKGYSAFTGVSLTASYTASSGGTPPTTPASYSNTDNYNIPDNK AAGITSPITVTRTGDSGTVTAVVNIVHPYIGDLKVQLISPSGKTVTLHSNTGSGAANINKSYTADMTGANSNGVWKLKAV DSGRGDVGYIDSWELSFQ
Specific function: Subtilisin is an extracellular alkaline serine protease, it catalyzes the hydrolysis of proteins and peptide amides [H]
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 - InterPro: IPR009020 - InterPro: IPR010259 [H]
Pfam domain/function: PF05922 Inhibitor_I9; PF00082 Peptidase_S8 [H]
EC number: =3.4.21.62 [H]
Molecular weight: Translated: 84819; Mature: 84688
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: PS00137 SUBTILASE_HIS ; PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTINRTTKIALSLSSLAIAISAGVQAAPQAPGFAAALQAQTSPLPKRYIVKFKNADAAAI CCCCCEEEEEEEHHHEEEEEECCCCCCCCCCCHHHHHCCCCCCCCCEEEEEECCCCCEEE MSASNVQSMSDQQSSDATTDALPSTMNYQPQMAEISAQHTALNKVQAKEMKRIGRSNSYS EEHHHHHHHHCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEE VKLDANGINTLKKRADVEYVEEDMPRHLLSESTPWGQTFVGATQLSDSQAGNRTICIIDS EEEECCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEEEEEC GYDRSHSELGGNNVTGTNNSGTGNWFEPGNNNAHGTHVAGTIAAIANNDGVIGVMPNQTA CCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCEEEECCCCCC NIHVVKVFNESGWGYSSSLVAAVDTCVANGANVVTMSLGGAGSSTTERNALAAHYNNGVL CEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEEEECCCEE LIAAAGNAGDSTHSYPASYDGVMSVASVDNHKDHSAFSQYTNQVEISGPGEAILSTVTRG EEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHCCEEEECCCHHHHHHHHHCC EGRLADITIGGQSYFDSGVVPHNRLISSGGSYVPAPYNGTATATLAECSVSGTSFNCGNM CCEEEEEEECCHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCEEECCCC TNKICLVERVGNQGTSYPEINAAKACKNAGASAAIVYSNAALPGLQNPFLVDANSEINMV CCCEEEEEECCCCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCCCCCCEEEECCCCEEEE SVSVDRATGLALRNQLGATATVSNQGNKDYEYYNGTSMATPHVSGVATLVWSYHPECSAA EEEECCHHHHHHHHHCCCEEEECCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCHH QVRNALKMTAEDLGTAGRDNYYGYGLVNAVAAKTFLDASCTGPTGPVDPTPTDGVLVNGV HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECH AKTGLGGAASEELHFSFDVPQGATNLGFVMNGGTGDADLYVQYGAAPTTANYDCRPYKSG HHCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCC NSESCPITNIQSGTYYAMLKGYSAFTGVSLTASYTASSGGTPPTTPASYSNTDNYNIPDN CCCCCCEEEECCCEEEEEEECCCHHCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC KAAGITSPITVTRTGDSGTVTAVVNIVHPYIGDLKVQLISPSGKTVTLHSNTGSGAANIN CCCCCCCCEEEEEECCCCEEEEEEEHHHCCCCCEEEEEECCCCCEEEEECCCCCCCCCCC KSYTADMTGANSNGVWKLKAVDSGRGDVGYIDSWELSFQ CCEEEEECCCCCCCEEEEEEECCCCCCCCEEECEEEECC >Mature Secondary Structure TINRTTKIALSLSSLAIAISAGVQAAPQAPGFAAALQAQTSPLPKRYIVKFKNADAAAI CCCCEEEEEEEHHHEEEEEECCCCCCCCCCCHHHHHCCCCCCCCCEEEEEECCCCCEEE MSASNVQSMSDQQSSDATTDALPSTMNYQPQMAEISAQHTALNKVQAKEMKRIGRSNSYS EEHHHHHHHHCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEE VKLDANGINTLKKRADVEYVEEDMPRHLLSESTPWGQTFVGATQLSDSQAGNRTICIIDS EEEECCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEEEEEC GYDRSHSELGGNNVTGTNNSGTGNWFEPGNNNAHGTHVAGTIAAIANNDGVIGVMPNQTA CCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCEEEECCCCCC NIHVVKVFNESGWGYSSSLVAAVDTCVANGANVVTMSLGGAGSSTTERNALAAHYNNGVL CEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEEEECCCEE LIAAAGNAGDSTHSYPASYDGVMSVASVDNHKDHSAFSQYTNQVEISGPGEAILSTVTRG EEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHCCEEEECCCHHHHHHHHHCC EGRLADITIGGQSYFDSGVVPHNRLISSGGSYVPAPYNGTATATLAECSVSGTSFNCGNM CCEEEEEEECCHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCEEECCCC TNKICLVERVGNQGTSYPEINAAKACKNAGASAAIVYSNAALPGLQNPFLVDANSEINMV CCCEEEEEECCCCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCCCCCCEEEECCCCEEEE SVSVDRATGLALRNQLGATATVSNQGNKDYEYYNGTSMATPHVSGVATLVWSYHPECSAA EEEECCHHHHHHHHHCCCEEEECCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCHH QVRNALKMTAEDLGTAGRDNYYGYGLVNAVAAKTFLDASCTGPTGPVDPTPTDGVLVNGV HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECH AKTGLGGAASEELHFSFDVPQGATNLGFVMNGGTGDADLYVQYGAAPTTANYDCRPYKSG HHCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCC NSESCPITNIQSGTYYAMLKGYSAFTGVSLTASYTASSGGTPPTTPASYSNTDNYNIPDN CCCCCCEEEECCCEEEEEEECCCHHCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC KAAGITSPITVTRTGDSGTVTAVVNIVHPYIGDLKVQLISPSGKTVTLHSNTGSGAANIN CCCCCCCCEEEEEECCCCEEEEEEEHHHCCCCCEEEEEECCCCCEEEEECCCCCCCCCCC KSYTADMTGANSNGVWKLKAVDSGRGDVGYIDSWELSFQ CCEEEEECCCCCCCEEEEEEECCCCCCCCEEECEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3001653; 4967581; 8512925; 9425066 [H]