Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

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The map label for this gene is 160875971

Identifier: 160875971

GI number: 160875971

Start: 3409027

End: 3411105

Strand: Direct

Name: 160875971

Synonym: Sbal195_2861

Alternate gene names: NA

Gene position: 3409027-3411105 (Clockwise)

Preceding gene: 160875970

Following gene: 160875972

Centisome position: 63.75

GC content: 50.31

Gene sequence:

>2079_bases
ATGAGCCTACATTTTATTCGCCCAGAATGGCTACTTGCACTAGTGCCACTGGCTCTAGTGTTGTTGAGTTTATGGCGACA
ACACGAGAGCCACAGCGCGTGGAATAGGTATATTGCGCCGCATTTAGCCAAGATATTGGTCACCCAAGGCAGCAAGAAAT
CCCGTCGTCCTTTGCATTTATTAGCTTTCACTTGGCTGATGGCGACTTTTGCGCTCGCCGGACCTGCCGTTAATAAACAG
TCCTTACCTGTGTTTGCCGCCGAGCAAGGCCGCGTATTGGTGATGGACATGTCTGTGTCTATGTTCGCTACCGATCTTGC
ACCAAACCGGTTAACCCAAGCTAAATTTAGGGCTACGGATCTCCTGCGTAATCTTAAAGAAGGTGAAACAGGTTTAGTCG
CCTTTGCTGGCGATGCCTTTACTATCAGCCCGTTAACGCGCGATACCGGCACGCTACTCAATTTATTGCCGACCTTAAGC
CCTGAAATCATGCCCGTTCGTGGCTCAAACTTAGCGGCAGGTTTAACCCAAGCTAAAACGCTACTGGCTCAGGGTGGGCA
TATTCGCGGTGATATTATCGTGATGACAGATGGCATAACCGCAGCCCAATTTGATGACGCTAACTCGGCATTAAGTGGCA
CGCAATATCGCCTTGCCGTCGTCGCTTTTGGTACCAGCCAAGGCGCGCCAATTCGTCTACCCGATGGACAATTGCAGCGC
GACAGTAGCAACGAGGTCGTTGTGGCCAGCACTGACTTTGGCCTGCTGCAAAAACTGGCAGCGGATAACAAAGGCGTGTT
AATCCAAAATCGCACCGACGGCAATGATCTGGCCCAATTACAACATTGGTTAAGTGATACGGGCGATGCCAAAGCCACAG
ATCTTGACGGTGAAACCTGGCAGGATCTCGGCCCTTATCTCGCCCTGCTATTACTGCTGCCCGCCCTTTTCAGCTTTAGG
CAAGGAATAGTGGCAAGCGTTGGATTTGCCACTCTCATTGGCGGTTTACTGCTCGCGGCCGCGCCTCAGCCTGCCCATGC
CAGTGTGTGGGACAATGTGTGGAAAACAACAGATCAGCAAGCGATGCAGGCCTATCAATCCCAAGATTATGCCAACGCCG
CTAAGCAGTTTGAGTCACCCCAATGGCGTGGCAGCGCCCAATATAAGGCCGGTGATTATGAGCAAGCGCTGAAAACCTTC
GAGCAAGATAGCTCAGCCCAAGGCCTCTACAATCAAGGCAATGCGTTGATGCAACTCGGTAAACCCGATAAGGCTAAGGA
GCGCTATCAAGCCGCACTTGAAAAACAAGCCGATTTCCCAGCGGCGAAGGCCAACCTTGAACTGGCTGAAAAGCAATTGA
AACAACAGCAAAAGCAGCAAGGTAAAAACGATCAACAGGATAAGAACCAAGATCAACAAGGCGATCAGCAGTCCGGTGAT
TCCAATTCAGGTGACCAACAATCTGGCGACCAACAATCCGGTAATCAACAGTCGCAGGATAAACAACAATCTGACCAAGA
TAGCGCTCAGAAAGATAAGCAAGATCAAGCGGGGCAAGAGCCTCAAGAGCAACAGGACAATGCCAATCCTGAGCAAAGCT
CTGAGCAGCAAAAAGCGGATGAGCAACAGTCTGAGCAAGATAAGCAAAATGGCAATGCTCAGGACAAGCAGGATGAAGCT
CAGCAAGATCCCGCGAAAGATAAAGCGCAACAGGATCAACAAGCCAAGCAGCAAAATGCCGAGCAGGATGCAAAGGACAA
TTCACCTGTAGATAATGAAGCTAAGATGCAAGCGCAGGCTAACGCCTATGCCGAGGAGCAAAAATCCGCTGAGCAAGCAA
AGCAAAGCGTTGGCGCCAAAGAAGCTCCAGAGCAAAATGCGCAAGATAAACAAGAAGCTGCTATGAGTGAATCTGTCGAA
GCGCCGCCAACCAATAGCGAACCGCTTCCCGCAGAAATGCAGCGAGCACTGAGGGGAGTGAGTGAAGACCCTCAAGTGTT
GCTTCGCAACAAAATGCAGTTGGAATATCAAAAACGCCGTCAAAATGGCCAAATATCAAAGGATAACGAACAGTGGTGA

Upstream 100 bases:

>100_bases
TACTGACGAGCCTGTGGATTGCCTTAGGTCAATTACCATTCTTTGCAGCGCGCCGCGTTAAACCCTCTGTCGCAACCACT
TCACAGGGGAACATTAAATA

Downstream 100 bases:

>100_bases
TCAGACAATTTTTTATCCTGCTACTCCTTGCCATCGGAGTGGCTCATCCCGCCTTTGCACTCAGCAAAATTGAGGCATCG
GTCGATCGCAATCCTGTTAT

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: Von Willebrand Factor Type A; TPR Domain-Containing Protein; BatB Protein; TPR Domain Protein; Von Willebrand Factor Type A Domain-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; Aerotolerance-Related Membrane Protein; Transmembrane Protein; TPR Repeat; TPR Domain Protein In Aerotolerance Operon; Von Willebrand Factor Type A Domain Protein; Tetratricopeptide Repeat Family; Unknwon Proteins; Transmembrane TPR Repeat-Containing Protein; Ssl1 Domain Protein; Batb Protein; BatB/BatC Protein; Tetratricopeptide Repeat And VWA Domain-Containing Protein; Tpr Domain Protein; Tetratricopeptide Repeat Domain Protein; Protein Containing A Von Willebrand Factor Type A Domain

Number of amino acids: Translated: 692; Mature: 691

Protein sequence:

>692_residues
MSLHFIRPEWLLALVPLALVLLSLWRQHESHSAWNRYIAPHLAKILVTQGSKKSRRPLHLLAFTWLMATFALAGPAVNKQ
SLPVFAAEQGRVLVMDMSVSMFATDLAPNRLTQAKFRATDLLRNLKEGETGLVAFAGDAFTISPLTRDTGTLLNLLPTLS
PEIMPVRGSNLAAGLTQAKTLLAQGGHIRGDIIVMTDGITAAQFDDANSALSGTQYRLAVVAFGTSQGAPIRLPDGQLQR
DSSNEVVVASTDFGLLQKLAADNKGVLIQNRTDGNDLAQLQHWLSDTGDAKATDLDGETWQDLGPYLALLLLLPALFSFR
QGIVASVGFATLIGGLLLAAAPQPAHASVWDNVWKTTDQQAMQAYQSQDYANAAKQFESPQWRGSAQYKAGDYEQALKTF
EQDSSAQGLYNQGNALMQLGKPDKAKERYQAALEKQADFPAAKANLELAEKQLKQQQKQQGKNDQQDKNQDQQGDQQSGD
SNSGDQQSGDQQSGNQQSQDKQQSDQDSAQKDKQDQAGQEPQEQQDNANPEQSSEQQKADEQQSEQDKQNGNAQDKQDEA
QQDPAKDKAQQDQQAKQQNAEQDAKDNSPVDNEAKMQAQANAYAEEQKSAEQAKQSVGAKEAPEQNAQDKQEAAMSESVE
APPTNSEPLPAEMQRALRGVSEDPQVLLRNKMQLEYQKRRQNGQISKDNEQW

Sequences:

>Translated_692_residues
MSLHFIRPEWLLALVPLALVLLSLWRQHESHSAWNRYIAPHLAKILVTQGSKKSRRPLHLLAFTWLMATFALAGPAVNKQ
SLPVFAAEQGRVLVMDMSVSMFATDLAPNRLTQAKFRATDLLRNLKEGETGLVAFAGDAFTISPLTRDTGTLLNLLPTLS
PEIMPVRGSNLAAGLTQAKTLLAQGGHIRGDIIVMTDGITAAQFDDANSALSGTQYRLAVVAFGTSQGAPIRLPDGQLQR
DSSNEVVVASTDFGLLQKLAADNKGVLIQNRTDGNDLAQLQHWLSDTGDAKATDLDGETWQDLGPYLALLLLLPALFSFR
QGIVASVGFATLIGGLLLAAAPQPAHASVWDNVWKTTDQQAMQAYQSQDYANAAKQFESPQWRGSAQYKAGDYEQALKTF
EQDSSAQGLYNQGNALMQLGKPDKAKERYQAALEKQADFPAAKANLELAEKQLKQQQKQQGKNDQQDKNQDQQGDQQSGD
SNSGDQQSGDQQSGNQQSQDKQQSDQDSAQKDKQDQAGQEPQEQQDNANPEQSSEQQKADEQQSEQDKQNGNAQDKQDEA
QQDPAKDKAQQDQQAKQQNAEQDAKDNSPVDNEAKMQAQANAYAEEQKSAEQAKQSVGAKEAPEQNAQDKQEAAMSESVE
APPTNSEPLPAEMQRALRGVSEDPQVLLRNKMQLEYQKRRQNGQISKDNEQW
>Mature_691_residues
SLHFIRPEWLLALVPLALVLLSLWRQHESHSAWNRYIAPHLAKILVTQGSKKSRRPLHLLAFTWLMATFALAGPAVNKQS
LPVFAAEQGRVLVMDMSVSMFATDLAPNRLTQAKFRATDLLRNLKEGETGLVAFAGDAFTISPLTRDTGTLLNLLPTLSP
EIMPVRGSNLAAGLTQAKTLLAQGGHIRGDIIVMTDGITAAQFDDANSALSGTQYRLAVVAFGTSQGAPIRLPDGQLQRD
SSNEVVVASTDFGLLQKLAADNKGVLIQNRTDGNDLAQLQHWLSDTGDAKATDLDGETWQDLGPYLALLLLLPALFSFRQ
GIVASVGFATLIGGLLLAAAPQPAHASVWDNVWKTTDQQAMQAYQSQDYANAAKQFESPQWRGSAQYKAGDYEQALKTFE
QDSSAQGLYNQGNALMQLGKPDKAKERYQAALEKQADFPAAKANLELAEKQLKQQQKQQGKNDQQDKNQDQQGDQQSGDS
NSGDQQSGDQQSGNQQSQDKQQSDQDSAQKDKQDQAGQEPQEQQDNANPEQSSEQQKADEQQSEQDKQNGNAQDKQDEAQ
QDPAKDKAQQDQQAKQQNAEQDAKDNSPVDNEAKMQAQANAYAEEQKSAEQAKQSVGAKEAPEQNAQDKQEAAMSESVEA
PPTNSEPLPAEMQRALRGVSEDPQVLLRNKMQLEYQKRRQNGQISKDNEQW

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 75909; Mature: 75777

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION ; PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLHFIRPEWLLALVPLALVLLSLWRQHESHSAWNRYIAPHLAKILVTQGSKKSRRPLHL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
LAFTWLMATFALAGPAVNKQSLPVFAAEQGRVLVMDMSVSMFATDLAPNRLTQAKFRATD
HHHHHHHHHHHHHCCCCCCCCCCEEECCCCCEEEEECCHHHHHHHCCCCHHHHHHHHHHH
LLRNLKEGETGLVAFAGDAFTISPLTRDTGTLLNLLPTLSPEIMPVRGSNLAAGLTQAKT
HHHHHHCCCCCEEEEECCCEEECCCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHH
LLAQGGHIRGDIIVMTDGITAAQFDDANSALSGTQYRLAVVAFGTSQGAPIRLPDGQLQR
HHHCCCCCCCEEEEEECCCCEECCCCCCHHCCCCCEEEEEEEECCCCCCEEECCCCCCCC
DSSNEVVVASTDFGLLQKLAADNKGVLIQNRTDGNDLAQLQHWLSDTGDAKATDLDGETW
CCCCCEEEEECCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCHH
QDLGPYLALLLLLPALFSFRQGIVASVGFATLIGGLLLAAAPQPAHASVWDNVWKTTDQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHH
AMQAYQSQDYANAAKQFESPQWRGSAQYKAGDYEQALKTFEQDSSAQGLYNQGNALMQLG
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHCCCHHEECC
KPDKAKERYQAALEKQADFPAAKANLELAEKQLKQQQKQQGKNDQQDKNQDQQGDQQSGD
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHCCCCCCCC
SNSGDQQSGDQQSGNQQSQDKQQSDQDSAQKDKQDQAGQEPQEQQDNANPEQSSEQQKAD
CCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHH
EQQSEQDKQNGNAQDKQDEAQQDPAKDKAQQDQQAKQQNAEQDAKDNSPVDNEAKMQAQA
HHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
NAYAEEQKSAEQAKQSVGAKEAPEQNAQDKQEAAMSESVEAPPTNSEPLPAEMQRALRGV
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCC
SEDPQVLLRNKMQLEYQKRRQNGQISKDNEQW
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SLHFIRPEWLLALVPLALVLLSLWRQHESHSAWNRYIAPHLAKILVTQGSKKSRRPLHL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
LAFTWLMATFALAGPAVNKQSLPVFAAEQGRVLVMDMSVSMFATDLAPNRLTQAKFRATD
HHHHHHHHHHHHHCCCCCCCCCCEEECCCCCEEEEECCHHHHHHHCCCCHHHHHHHHHHH
LLRNLKEGETGLVAFAGDAFTISPLTRDTGTLLNLLPTLSPEIMPVRGSNLAAGLTQAKT
HHHHHHCCCCCEEEEECCCEEECCCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHH
LLAQGGHIRGDIIVMTDGITAAQFDDANSALSGTQYRLAVVAFGTSQGAPIRLPDGQLQR
HHHCCCCCCCEEEEEECCCCEECCCCCCHHCCCCCEEEEEEEECCCCCCEEECCCCCCCC
DSSNEVVVASTDFGLLQKLAADNKGVLIQNRTDGNDLAQLQHWLSDTGDAKATDLDGETW
CCCCCEEEEECCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCHH
QDLGPYLALLLLLPALFSFRQGIVASVGFATLIGGLLLAAAPQPAHASVWDNVWKTTDQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHH
AMQAYQSQDYANAAKQFESPQWRGSAQYKAGDYEQALKTFEQDSSAQGLYNQGNALMQLG
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHCCCHHEECC
KPDKAKERYQAALEKQADFPAAKANLELAEKQLKQQQKQQGKNDQQDKNQDQQGDQQSGD
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHCCCCCCCC
SNSGDQQSGDQQSGNQQSQDKQQSDQDSAQKDKQDQAGQEPQEQQDNANPEQSSEQQKAD
CCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHH
EQQSEQDKQNGNAQDKQDEAQQDPAKDKAQQDQQAKQQNAEQDAKDNSPVDNEAKMQAQA
HHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
NAYAEEQKSAEQAKQSVGAKEAPEQNAQDKQEAAMSESVEAPPTNSEPLPAEMQRALRGV
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCC
SEDPQVLLRNKMQLEYQKRRQNGQISKDNEQW
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA