| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875971
Identifier: 160875971
GI number: 160875971
Start: 3409027
End: 3411105
Strand: Direct
Name: 160875971
Synonym: Sbal195_2861
Alternate gene names: NA
Gene position: 3409027-3411105 (Clockwise)
Preceding gene: 160875970
Following gene: 160875972
Centisome position: 63.75
GC content: 50.31
Gene sequence:
>2079_bases ATGAGCCTACATTTTATTCGCCCAGAATGGCTACTTGCACTAGTGCCACTGGCTCTAGTGTTGTTGAGTTTATGGCGACA ACACGAGAGCCACAGCGCGTGGAATAGGTATATTGCGCCGCATTTAGCCAAGATATTGGTCACCCAAGGCAGCAAGAAAT CCCGTCGTCCTTTGCATTTATTAGCTTTCACTTGGCTGATGGCGACTTTTGCGCTCGCCGGACCTGCCGTTAATAAACAG TCCTTACCTGTGTTTGCCGCCGAGCAAGGCCGCGTATTGGTGATGGACATGTCTGTGTCTATGTTCGCTACCGATCTTGC ACCAAACCGGTTAACCCAAGCTAAATTTAGGGCTACGGATCTCCTGCGTAATCTTAAAGAAGGTGAAACAGGTTTAGTCG CCTTTGCTGGCGATGCCTTTACTATCAGCCCGTTAACGCGCGATACCGGCACGCTACTCAATTTATTGCCGACCTTAAGC CCTGAAATCATGCCCGTTCGTGGCTCAAACTTAGCGGCAGGTTTAACCCAAGCTAAAACGCTACTGGCTCAGGGTGGGCA TATTCGCGGTGATATTATCGTGATGACAGATGGCATAACCGCAGCCCAATTTGATGACGCTAACTCGGCATTAAGTGGCA CGCAATATCGCCTTGCCGTCGTCGCTTTTGGTACCAGCCAAGGCGCGCCAATTCGTCTACCCGATGGACAATTGCAGCGC GACAGTAGCAACGAGGTCGTTGTGGCCAGCACTGACTTTGGCCTGCTGCAAAAACTGGCAGCGGATAACAAAGGCGTGTT AATCCAAAATCGCACCGACGGCAATGATCTGGCCCAATTACAACATTGGTTAAGTGATACGGGCGATGCCAAAGCCACAG ATCTTGACGGTGAAACCTGGCAGGATCTCGGCCCTTATCTCGCCCTGCTATTACTGCTGCCCGCCCTTTTCAGCTTTAGG CAAGGAATAGTGGCAAGCGTTGGATTTGCCACTCTCATTGGCGGTTTACTGCTCGCGGCCGCGCCTCAGCCTGCCCATGC CAGTGTGTGGGACAATGTGTGGAAAACAACAGATCAGCAAGCGATGCAGGCCTATCAATCCCAAGATTATGCCAACGCCG CTAAGCAGTTTGAGTCACCCCAATGGCGTGGCAGCGCCCAATATAAGGCCGGTGATTATGAGCAAGCGCTGAAAACCTTC GAGCAAGATAGCTCAGCCCAAGGCCTCTACAATCAAGGCAATGCGTTGATGCAACTCGGTAAACCCGATAAGGCTAAGGA GCGCTATCAAGCCGCACTTGAAAAACAAGCCGATTTCCCAGCGGCGAAGGCCAACCTTGAACTGGCTGAAAAGCAATTGA AACAACAGCAAAAGCAGCAAGGTAAAAACGATCAACAGGATAAGAACCAAGATCAACAAGGCGATCAGCAGTCCGGTGAT TCCAATTCAGGTGACCAACAATCTGGCGACCAACAATCCGGTAATCAACAGTCGCAGGATAAACAACAATCTGACCAAGA TAGCGCTCAGAAAGATAAGCAAGATCAAGCGGGGCAAGAGCCTCAAGAGCAACAGGACAATGCCAATCCTGAGCAAAGCT CTGAGCAGCAAAAAGCGGATGAGCAACAGTCTGAGCAAGATAAGCAAAATGGCAATGCTCAGGACAAGCAGGATGAAGCT CAGCAAGATCCCGCGAAAGATAAAGCGCAACAGGATCAACAAGCCAAGCAGCAAAATGCCGAGCAGGATGCAAAGGACAA TTCACCTGTAGATAATGAAGCTAAGATGCAAGCGCAGGCTAACGCCTATGCCGAGGAGCAAAAATCCGCTGAGCAAGCAA AGCAAAGCGTTGGCGCCAAAGAAGCTCCAGAGCAAAATGCGCAAGATAAACAAGAAGCTGCTATGAGTGAATCTGTCGAA GCGCCGCCAACCAATAGCGAACCGCTTCCCGCAGAAATGCAGCGAGCACTGAGGGGAGTGAGTGAAGACCCTCAAGTGTT GCTTCGCAACAAAATGCAGTTGGAATATCAAAAACGCCGTCAAAATGGCCAAATATCAAAGGATAACGAACAGTGGTGA
Upstream 100 bases:
>100_bases TACTGACGAGCCTGTGGATTGCCTTAGGTCAATTACCATTCTTTGCAGCGCGCCGCGTTAAACCCTCTGTCGCAACCACT TCACAGGGGAACATTAAATA
Downstream 100 bases:
>100_bases TCAGACAATTTTTTATCCTGCTACTCCTTGCCATCGGAGTGGCTCATCCCGCCTTTGCACTCAGCAAAATTGAGGCATCG GTCGATCGCAATCCTGTTAT
Product: TPR repeat-containing protein
Products: NA
Alternate protein names: Von Willebrand Factor Type A; TPR Domain-Containing Protein; BatB Protein; TPR Domain Protein; Von Willebrand Factor Type A Domain-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; Aerotolerance-Related Membrane Protein; Transmembrane Protein; TPR Repeat; TPR Domain Protein In Aerotolerance Operon; Von Willebrand Factor Type A Domain Protein; Tetratricopeptide Repeat Family; Unknwon Proteins; Transmembrane TPR Repeat-Containing Protein; Ssl1 Domain Protein; Batb Protein; BatB/BatC Protein; Tetratricopeptide Repeat And VWA Domain-Containing Protein; Tpr Domain Protein; Tetratricopeptide Repeat Domain Protein; Protein Containing A Von Willebrand Factor Type A Domain
Number of amino acids: Translated: 692; Mature: 691
Protein sequence:
>692_residues MSLHFIRPEWLLALVPLALVLLSLWRQHESHSAWNRYIAPHLAKILVTQGSKKSRRPLHLLAFTWLMATFALAGPAVNKQ SLPVFAAEQGRVLVMDMSVSMFATDLAPNRLTQAKFRATDLLRNLKEGETGLVAFAGDAFTISPLTRDTGTLLNLLPTLS PEIMPVRGSNLAAGLTQAKTLLAQGGHIRGDIIVMTDGITAAQFDDANSALSGTQYRLAVVAFGTSQGAPIRLPDGQLQR DSSNEVVVASTDFGLLQKLAADNKGVLIQNRTDGNDLAQLQHWLSDTGDAKATDLDGETWQDLGPYLALLLLLPALFSFR QGIVASVGFATLIGGLLLAAAPQPAHASVWDNVWKTTDQQAMQAYQSQDYANAAKQFESPQWRGSAQYKAGDYEQALKTF EQDSSAQGLYNQGNALMQLGKPDKAKERYQAALEKQADFPAAKANLELAEKQLKQQQKQQGKNDQQDKNQDQQGDQQSGD SNSGDQQSGDQQSGNQQSQDKQQSDQDSAQKDKQDQAGQEPQEQQDNANPEQSSEQQKADEQQSEQDKQNGNAQDKQDEA QQDPAKDKAQQDQQAKQQNAEQDAKDNSPVDNEAKMQAQANAYAEEQKSAEQAKQSVGAKEAPEQNAQDKQEAAMSESVE APPTNSEPLPAEMQRALRGVSEDPQVLLRNKMQLEYQKRRQNGQISKDNEQW
Sequences:
>Translated_692_residues MSLHFIRPEWLLALVPLALVLLSLWRQHESHSAWNRYIAPHLAKILVTQGSKKSRRPLHLLAFTWLMATFALAGPAVNKQ SLPVFAAEQGRVLVMDMSVSMFATDLAPNRLTQAKFRATDLLRNLKEGETGLVAFAGDAFTISPLTRDTGTLLNLLPTLS PEIMPVRGSNLAAGLTQAKTLLAQGGHIRGDIIVMTDGITAAQFDDANSALSGTQYRLAVVAFGTSQGAPIRLPDGQLQR DSSNEVVVASTDFGLLQKLAADNKGVLIQNRTDGNDLAQLQHWLSDTGDAKATDLDGETWQDLGPYLALLLLLPALFSFR QGIVASVGFATLIGGLLLAAAPQPAHASVWDNVWKTTDQQAMQAYQSQDYANAAKQFESPQWRGSAQYKAGDYEQALKTF EQDSSAQGLYNQGNALMQLGKPDKAKERYQAALEKQADFPAAKANLELAEKQLKQQQKQQGKNDQQDKNQDQQGDQQSGD SNSGDQQSGDQQSGNQQSQDKQQSDQDSAQKDKQDQAGQEPQEQQDNANPEQSSEQQKADEQQSEQDKQNGNAQDKQDEA QQDPAKDKAQQDQQAKQQNAEQDAKDNSPVDNEAKMQAQANAYAEEQKSAEQAKQSVGAKEAPEQNAQDKQEAAMSESVE APPTNSEPLPAEMQRALRGVSEDPQVLLRNKMQLEYQKRRQNGQISKDNEQW >Mature_691_residues SLHFIRPEWLLALVPLALVLLSLWRQHESHSAWNRYIAPHLAKILVTQGSKKSRRPLHLLAFTWLMATFALAGPAVNKQS LPVFAAEQGRVLVMDMSVSMFATDLAPNRLTQAKFRATDLLRNLKEGETGLVAFAGDAFTISPLTRDTGTLLNLLPTLSP EIMPVRGSNLAAGLTQAKTLLAQGGHIRGDIIVMTDGITAAQFDDANSALSGTQYRLAVVAFGTSQGAPIRLPDGQLQRD SSNEVVVASTDFGLLQKLAADNKGVLIQNRTDGNDLAQLQHWLSDTGDAKATDLDGETWQDLGPYLALLLLLPALFSFRQ GIVASVGFATLIGGLLLAAAPQPAHASVWDNVWKTTDQQAMQAYQSQDYANAAKQFESPQWRGSAQYKAGDYEQALKTFE QDSSAQGLYNQGNALMQLGKPDKAKERYQAALEKQADFPAAKANLELAEKQLKQQQKQQGKNDQQDKNQDQQGDQQSGDS NSGDQQSGDQQSGNQQSQDKQQSDQDSAQKDKQDQAGQEPQEQQDNANPEQSSEQQKADEQQSEQDKQNGNAQDKQDEAQ QDPAKDKAQQDQQAKQQNAEQDAKDNSPVDNEAKMQAQANAYAEEQKSAEQAKQSVGAKEAPEQNAQDKQEAAMSESVEA PPTNSEPLPAEMQRALRGVSEDPQVLLRNKMQLEYQKRRQNGQISKDNEQW
Specific function: Unknown
COG id: COG2304
COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75909; Mature: 75777
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION ; PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLHFIRPEWLLALVPLALVLLSLWRQHESHSAWNRYIAPHLAKILVTQGSKKSRRPLHL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH LAFTWLMATFALAGPAVNKQSLPVFAAEQGRVLVMDMSVSMFATDLAPNRLTQAKFRATD HHHHHHHHHHHHHCCCCCCCCCCEEECCCCCEEEEECCHHHHHHHCCCCHHHHHHHHHHH LLRNLKEGETGLVAFAGDAFTISPLTRDTGTLLNLLPTLSPEIMPVRGSNLAAGLTQAKT HHHHHHCCCCCEEEEECCCEEECCCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHH LLAQGGHIRGDIIVMTDGITAAQFDDANSALSGTQYRLAVVAFGTSQGAPIRLPDGQLQR HHHCCCCCCCEEEEEECCCCEECCCCCCHHCCCCCEEEEEEEECCCCCCEEECCCCCCCC DSSNEVVVASTDFGLLQKLAADNKGVLIQNRTDGNDLAQLQHWLSDTGDAKATDLDGETW CCCCCEEEEECCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCHH QDLGPYLALLLLLPALFSFRQGIVASVGFATLIGGLLLAAAPQPAHASVWDNVWKTTDQQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHH AMQAYQSQDYANAAKQFESPQWRGSAQYKAGDYEQALKTFEQDSSAQGLYNQGNALMQLG HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHCCCHHEECC KPDKAKERYQAALEKQADFPAAKANLELAEKQLKQQQKQQGKNDQQDKNQDQQGDQQSGD CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHCCCCCCCC SNSGDQQSGDQQSGNQQSQDKQQSDQDSAQKDKQDQAGQEPQEQQDNANPEQSSEQQKAD CCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHH EQQSEQDKQNGNAQDKQDEAQQDPAKDKAQQDQQAKQQNAEQDAKDNSPVDNEAKMQAQA HHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH NAYAEEQKSAEQAKQSVGAKEAPEQNAQDKQEAAMSESVEAPPTNSEPLPAEMQRALRGV HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCC SEDPQVLLRNKMQLEYQKRRQNGQISKDNEQW CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SLHFIRPEWLLALVPLALVLLSLWRQHESHSAWNRYIAPHLAKILVTQGSKKSRRPLHL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH LAFTWLMATFALAGPAVNKQSLPVFAAEQGRVLVMDMSVSMFATDLAPNRLTQAKFRATD HHHHHHHHHHHHHCCCCCCCCCCEEECCCCCEEEEECCHHHHHHHCCCCHHHHHHHHHHH LLRNLKEGETGLVAFAGDAFTISPLTRDTGTLLNLLPTLSPEIMPVRGSNLAAGLTQAKT HHHHHHCCCCCEEEEECCCEEECCCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHH LLAQGGHIRGDIIVMTDGITAAQFDDANSALSGTQYRLAVVAFGTSQGAPIRLPDGQLQR HHHCCCCCCCEEEEEECCCCEECCCCCCHHCCCCCEEEEEEEECCCCCCEEECCCCCCCC DSSNEVVVASTDFGLLQKLAADNKGVLIQNRTDGNDLAQLQHWLSDTGDAKATDLDGETW CCCCCEEEEECCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCHH QDLGPYLALLLLLPALFSFRQGIVASVGFATLIGGLLLAAAPQPAHASVWDNVWKTTDQQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHH AMQAYQSQDYANAAKQFESPQWRGSAQYKAGDYEQALKTFEQDSSAQGLYNQGNALMQLG HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHCCCHHEECC KPDKAKERYQAALEKQADFPAAKANLELAEKQLKQQQKQQGKNDQQDKNQDQQGDQQSGD CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHCCCCCCCC SNSGDQQSGDQQSGNQQSQDKQQSDQDSAQKDKQDQAGQEPQEQQDNANPEQSSEQQKAD CCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHH EQQSEQDKQNGNAQDKQDEAQQDPAKDKAQQDQQAKQQNAEQDAKDNSPVDNEAKMQAQA HHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH NAYAEEQKSAEQAKQSVGAKEAPEQNAQDKQEAAMSESVEAPPTNSEPLPAEMQRALRGV HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCC SEDPQVLLRNKMQLEYQKRRQNGQISKDNEQW CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA