| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is asd [H]
Identifier: 160875948
GI number: 160875948
Start: 3379994
End: 3381010
Strand: Reverse
Name: asd [H]
Synonym: Sbal195_2838
Alternate gene names: 160875948
Gene position: 3381010-3379994 (Counterclockwise)
Preceding gene: 160875949
Following gene: 160875947
Centisome position: 63.23
GC content: 45.43
Gene sequence:
>1017_bases ATGTCACAGGAATTTAATGTTGTCGTTTTAGGTGCATCGGGCGCAGTGGGTCAAACAATGATAGAGATCCTCGAAGAGCG TAATTTCCCGGTTGCAAATTTGTACCCTTTAGCCAGTAGCCGCAGCGCCGGTGAAACGGTCAGCTTTCATGGCAAACAAA TTACCATTCTCGACGTAGAAACCTTCGATTGGACCCAAGCTCAAATTGGTTTCTTCTCCGCAGGGGGTGATGTTTCCGCC AAATGGGCACCGATTGCGGCTGAAGCGGGTTGTGTTGTTATCGATAACACCTCGCACTTTAGATACGACATCGATATTCC TTTGGTCGTACCCGAAGTGAATCCACATGCTATCGCCGATTTCCGCAATCGCAATATCATCGCTAATCCAAATTGCTCAA CCATTCAAATGCTAGTGGCGCTTAAGCCTATTTATGATGCCTATGGTATCAGCCGCATTAATGTGGCAACGTACCAGTCG GTTTCGGGTACAGGTAAAAAAGCCATTGAAGAGTTAGCGCATCAGTGCACTAAACTGCTGCAAGGTTTGCCTGCTGAAGC CGAAGTTTATCCAAAGCAAATTGCTTTTAACGTATTGCCGCAAATCGATAAATTTATGGATAACGGCTATACAAAAGAAG AAATGAAAATGGTCTGGGAAACCCAGAAGATTTTCGGTGACGATGAGATTTTAGTGAATGCAACCGCCGTACGTGTACCT GTGTTTTATGGTCACTCGGAAGCCATTAATATCGAAACTCGTCAGCCTGTCGATGCAGAAGACGTTAAAGCTTTACTGCG TAATGCCGAAGGAGTGGTATTGTTTGAGTCAGATGATGACTATCCAACTGCTGTAACCGATGGTGCTGGTACCGATCCGG TTTATGTTGGCCGCATTCGTAAGGATATCTCTCATTCTCACGGGATTAACCTGTGGGTGGTGTCAGACAATATTCGTAAG GGCGCAGCCTTGAACAGTGTGCAAATTGCCGAGATCTTAGTGAGAGATTATTACTAA
Upstream 100 bases:
>100_bases AACATAGACGCGAATTTAGTGCATTGGCGCTGGCTTATGACGGTCAATCTGAGGTAGATTGGTTGTCCAATTTAGGTTTT TCAGGAGTCGGTCAGTAGCT
Downstream 100 bases:
>100_bases GCACGAGATTGCATTTCATGCCCATTGAAAAAGCCTGCTGTCAGCAGGCTTTTTTTGTTTTACAATTGTGAACAGTAGCA GGGCAGGGATTTCTGGTTTA
Product: aspartate-semialdehyde dehydrogenase
Products: NA
Alternate protein names: ASA dehydrogenase; ASADH [H]
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MSQEFNVVVLGASGAVGQTMIEILEERNFPVANLYPLASSRSAGETVSFHGKQITILDVETFDWTQAQIGFFSAGGDVSA KWAPIAAEAGCVVIDNTSHFRYDIDIPLVVPEVNPHAIADFRNRNIIANPNCSTIQMLVALKPIYDAYGISRINVATYQS VSGTGKKAIEELAHQCTKLLQGLPAEAEVYPKQIAFNVLPQIDKFMDNGYTKEEMKMVWETQKIFGDDEILVNATAVRVP VFYGHSEAINIETRQPVDAEDVKALLRNAEGVVLFESDDDYPTAVTDGAGTDPVYVGRIRKDISHSHGINLWVVSDNIRK GAALNSVQIAEILVRDYY
Sequences:
>Translated_338_residues MSQEFNVVVLGASGAVGQTMIEILEERNFPVANLYPLASSRSAGETVSFHGKQITILDVETFDWTQAQIGFFSAGGDVSA KWAPIAAEAGCVVIDNTSHFRYDIDIPLVVPEVNPHAIADFRNRNIIANPNCSTIQMLVALKPIYDAYGISRINVATYQS VSGTGKKAIEELAHQCTKLLQGLPAEAEVYPKQIAFNVLPQIDKFMDNGYTKEEMKMVWETQKIFGDDEILVNATAVRVP VFYGHSEAINIETRQPVDAEDVKALLRNAEGVVLFESDDDYPTAVTDGAGTDPVYVGRIRKDISHSHGINLWVVSDNIRK GAALNSVQIAEILVRDYY >Mature_337_residues SQEFNVVVLGASGAVGQTMIEILEERNFPVANLYPLASSRSAGETVSFHGKQITILDVETFDWTQAQIGFFSAGGDVSAK WAPIAAEAGCVVIDNTSHFRYDIDIPLVVPEVNPHAIADFRNRNIIANPNCSTIQMLVALKPIYDAYGISRINVATYQSV SGTGKKAIEELAHQCTKLLQGLPAEAEVYPKQIAFNVLPQIDKFMDNGYTKEEMKMVWETQKIFGDDEILVNATAVRVPV FYGHSEAINIETRQPVDAEDVKALLRNAEGVVLFESDDDYPTAVTDGAGTDPVYVGRIRKDISHSHGINLWVVSDNIRKG AALNSVQIAEILVRDYY
Specific function: Unknown
COG id: COG0136
COG function: function code E; Aspartate-semialdehyde dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartate-semialdehyde dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788658, Length=338, Percent_Identity=45.2662721893491, Blast_Score=312, Evalue=2e-86, Organism=Escherichia coli, GI1789841, Length=360, Percent_Identity=27.2222222222222, Blast_Score=92, Evalue=4e-20, Organism=Saccharomyces cerevisiae, GI6320362, Length=383, Percent_Identity=29.7650130548303, Blast_Score=94, Evalue=3e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012080 - InterPro: IPR005986 - InterPro: IPR016040 - InterPro: IPR000534 - InterPro: IPR012280 [H]
Pfam domain/function: PF01118 Semialdhyde_dh; PF02774 Semialdhyde_dhC [H]
EC number: =1.2.1.11 [H]
Molecular weight: Translated: 37153; Mature: 37022
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQEFNVVVLGASGAVGQTMIEILEERNFPVANLYPLASSRSAGETVSFHGKQITILDVE CCCCEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCEEEEEEEE TFDWTQAQIGFFSAGGDVSAKWAPIAAEAGCVVIDNTSHFRYDIDIPLVVPEVNPHAIAD CCCCCCCEEEEEECCCCCCCEEECEECCCCEEEEECCCCEEEEECCEEEEECCCCCHHHH FRNRNIIANPNCSTIQMLVALKPIYDAYGISRINVATYQSVSGTGKKAIEELAHQCTKLL HCCCCEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHH QGLPAEAEVYPKQIAFNVLPQIDKFMDNGYTKEEMKMVWETQKIFGDDEILVNATAVRVP HCCCCCHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEEE VFYGHSEAINIETRQPVDAEDVKALLRNAEGVVLFESDDDYPTAVTDGAGTDPVYVGRIR EEECCCCEEEECCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCEEECCCCCCCEEEHHHH KDISHSHGINLWVVSDNIRKGAALNSVQIAEILVRDYY HHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure SQEFNVVVLGASGAVGQTMIEILEERNFPVANLYPLASSRSAGETVSFHGKQITILDVE CCCEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCEEEEEEEE TFDWTQAQIGFFSAGGDVSAKWAPIAAEAGCVVIDNTSHFRYDIDIPLVVPEVNPHAIAD CCCCCCCEEEEEECCCCCCCEEECEECCCCEEEEECCCCEEEEECCEEEEECCCCCHHHH FRNRNIIANPNCSTIQMLVALKPIYDAYGISRINVATYQSVSGTGKKAIEELAHQCTKLL HCCCCEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHH QGLPAEAEVYPKQIAFNVLPQIDKFMDNGYTKEEMKMVWETQKIFGDDEILVNATAVRVP HCCCCCHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEEE VFYGHSEAINIETRQPVDAEDVKALLRNAEGVVLFESDDDYPTAVTDGAGTDPVYVGRIR EEECCCCEEEECCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCEEECCCCCCCEEEHHHH KDISHSHGINLWVVSDNIRKGAALNSVQIAEILVRDYY HHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163523 [H]