Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

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The map label for this gene is pip [H]

Identifier: 160875939

GI number: 160875939

Start: 3366679

End: 3367968

Strand: Direct

Name: pip [H]

Synonym: Sbal195_2828

Alternate gene names: 160875939

Gene position: 3366679-3367968 (Clockwise)

Preceding gene: 160875927

Following gene: 160875941

Centisome position: 62.96

GC content: 47.05

Gene sequence:

>1290_bases
ATGAAACCCGATATTATTCTCGCCGGAGTGCTGGCGAAGAAACATACTTTTACCTTGCCCCTCAACTATCAAAATCCGAT
TGCAGAGCAAATCCAAGTGTTTGCCAGAGAACTCTGTAGCCCAGAAAACAAAGATAAAAAGCTACCTTATATCGTGTTTT
TCCAAGGCGGCCCGGGATTTGCGGCCATGCGCCCCGCCAGTAACAGCGGCTGGATCCGCCGCGCATTAAAAGAATATCGG
GTATTATTACTCGATCAACGCGGCACAGGCTTATCAACACCCATTAATTACCAAAGCCTGCAACACTTAGAGCCCGCAGC
TCAAGCTGAGTATCTAAGCCATTTCAGGGCTGACAATATCATTCGTGATGCAGAGACGATTCGTGCCCAGCTTTGCCCCG
CCGATAAATGGGCAATTCTTGGCCAAAGTTTCGGGGGATTTTGCGTATTACATTATTTAAGCGCCGCCCCTCAAGGTGTC
AGCGAAGCCTATATCACCGGCGGCATACCGTCATTAACCCGCAGTGCCGATGATGTCTATCTTGCAACTTATCAACGCGT
GCTGGCGAAGAATAAACAATTTTTCCAACGCTTCCACGATGCCCAACATTTAGTGACTCGCTTAGCAAAACACTTGCTTG
AAAATGAAGTGTATTTAGCAACGGGAGAACGCCTCACTGTTGAAATGTTGCAGCTGCTGGGTATTAATATCGGCATGGAG
CAAGGGCCTGAATCGGTTTATTATTTACTTGAGCAGGCCTTAATCAACACAGCTTCTGGGACAGTCGTGAACCCGTTATT
TTTAAATCATTTCGGTCAAATGCTCGATTACAACACTAACCCGATTTTTGCCCTGCTGCATGAGGCGATCTACTGCCAGC
ACACAGCTTCACAATGGGCGGCGCACAGGGTAAGACAACAATTCCCCGCCTTTAACTATCAGCAAGGTAAGCCGTTTTTA
TTCACCGGCGAGATGATTTACCCTTGGATGTTTGACCAATTCAGTCACTTAGTTCCGCTTAAAACCGCGGCTGAAATCCT
TGCCCATAAAACAGATTGGCCTGCACTGTATAATCTTGAACAACTGGCGCAAAACCGCGTCCCCGTTGCCGCAGCTATTT
ACAGTGAAGATATGTTTGTCGAGATGCAATACAGCCTTGAAACCGCGCAACAGGTCGGTAGGCTAAAGTATTGGTTAACG
TCAGAATATGAACACAACGGCATTCGCATGGATGGTGAGCACATACTGGATAAGCTCATCAGCTTAAACCGAGGTGACAC
CTTAAGATAA

Upstream 100 bases:

>100_bases
ATACGTGTTTCAACTAGCCTAGGTTGCTGCATCTGCAGGTTATTTGGGTATACAATCTGCCAATCACAATAACATGATCC
TCTGCCATTAAGGTTGTTTG

Downstream 100 bases:

>100_bases
AGGTTAATTTTAAGGGCTAATTAAGTTAACGCTGACATTATAAACCTGCTCCTCATCTATTGAGTGATTTTGGCAAGTTT
CAACGACCTATTTCCGTATG

Product: alpha/beta hydrolase fold protein

Products: NA

Alternate protein names: PIP; Prolyl aminopeptidase; PAP [H]

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MKPDIILAGVLAKKHTFTLPLNYQNPIAEQIQVFARELCSPENKDKKLPYIVFFQGGPGFAAMRPASNSGWIRRALKEYR
VLLLDQRGTGLSTPINYQSLQHLEPAAQAEYLSHFRADNIIRDAETIRAQLCPADKWAILGQSFGGFCVLHYLSAAPQGV
SEAYITGGIPSLTRSADDVYLATYQRVLAKNKQFFQRFHDAQHLVTRLAKHLLENEVYLATGERLTVEMLQLLGINIGME
QGPESVYYLLEQALINTASGTVVNPLFLNHFGQMLDYNTNPIFALLHEAIYCQHTASQWAAHRVRQQFPAFNYQQGKPFL
FTGEMIYPWMFDQFSHLVPLKTAAEILAHKTDWPALYNLEQLAQNRVPVAAAIYSEDMFVEMQYSLETAQQVGRLKYWLT
SEYEHNGIRMDGEHILDKLISLNRGDTLR

Sequences:

>Translated_429_residues
MKPDIILAGVLAKKHTFTLPLNYQNPIAEQIQVFARELCSPENKDKKLPYIVFFQGGPGFAAMRPASNSGWIRRALKEYR
VLLLDQRGTGLSTPINYQSLQHLEPAAQAEYLSHFRADNIIRDAETIRAQLCPADKWAILGQSFGGFCVLHYLSAAPQGV
SEAYITGGIPSLTRSADDVYLATYQRVLAKNKQFFQRFHDAQHLVTRLAKHLLENEVYLATGERLTVEMLQLLGINIGME
QGPESVYYLLEQALINTASGTVVNPLFLNHFGQMLDYNTNPIFALLHEAIYCQHTASQWAAHRVRQQFPAFNYQQGKPFL
FTGEMIYPWMFDQFSHLVPLKTAAEILAHKTDWPALYNLEQLAQNRVPVAAAIYSEDMFVEMQYSLETAQQVGRLKYWLT
SEYEHNGIRMDGEHILDKLISLNRGDTLR
>Mature_429_residues
MKPDIILAGVLAKKHTFTLPLNYQNPIAEQIQVFARELCSPENKDKKLPYIVFFQGGPGFAAMRPASNSGWIRRALKEYR
VLLLDQRGTGLSTPINYQSLQHLEPAAQAEYLSHFRADNIIRDAETIRAQLCPADKWAILGQSFGGFCVLHYLSAAPQGV
SEAYITGGIPSLTRSADDVYLATYQRVLAKNKQFFQRFHDAQHLVTRLAKHLLENEVYLATGERLTVEMLQLLGINIGME
QGPESVYYLLEQALINTASGTVVNPLFLNHFGQMLDYNTNPIFALLHEAIYCQHTASQWAAHRVRQQFPAFNYQQGKPFL
FTGEMIYPWMFDQFSHLVPLKTAAEILAHKTDWPALYNLEQLAQNRVPVAAAIYSEDMFVEMQYSLETAQQVGRLKYWLT
SEYEHNGIRMDGEHILDKLISLNRGDTLR

Specific function: Higher activity toward long peptides. Acts on hydroxyproline beta-naphthylamide with almost as high an activity as on proline beta-naphthylamide [H]

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S33 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR002410 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: =3.4.11.5 [H]

Molecular weight: Translated: 48786; Mature: 48786

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPDIILAGVLAKKHTFTLPLNYQNPIAEQIQVFARELCSPENKDKKLPYIVFFQGGPGF
CCCCEEEEEEHHCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCC
AAMRPASNSGWIRRALKEYRVLLLDQRGTGLSTPINYQSLQHLEPAAQAEYLSHFRADNI
EEECCCCCCHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHH
IRDAETIRAQLCPADKWAILGQSFGGFCVLHYLSAAPQGVSEAYITGGIPSLTRSADDVY
HHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHCCCCCHHHCCCCHHH
LATYQRVLAKNKQFFQRFHDAQHLVTRLAKHLLENEVYLATGERLTVEMLQLLGINIGME
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCCCCC
QGPESVYYLLEQALINTASGTVVNPLFLNHFGQMLDYNTNPIFALLHEAIYCQHTASQWA
CCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
AHRVRQQFPAFNYQQGKPFLFTGEMIYPWMFDQFSHLVPLKTAAEILAHKTDWPALYNLE
HHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHCCHH
QLAQNRVPVAAAIYSEDMFVEMQYSLETAQQVGRLKYWLTSEYEHNGIRMDGEHILDKLI
HHHHCCCCEEEEEECCCEEEEEHHHHHHHHHHHHHHEEEECCCCCCCEEECHHHHHHHHH
SLNRGDTLR
HCCCCCCCC
>Mature Secondary Structure
MKPDIILAGVLAKKHTFTLPLNYQNPIAEQIQVFARELCSPENKDKKLPYIVFFQGGPGF
CCCCEEEEEEHHCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCC
AAMRPASNSGWIRRALKEYRVLLLDQRGTGLSTPINYQSLQHLEPAAQAEYLSHFRADNI
EEECCCCCCHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHH
IRDAETIRAQLCPADKWAILGQSFGGFCVLHYLSAAPQGVSEAYITGGIPSLTRSADDVY
HHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHCCCCCHHHCCCCHHH
LATYQRVLAKNKQFFQRFHDAQHLVTRLAKHLLENEVYLATGERLTVEMLQLLGINIGME
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCCCCC
QGPESVYYLLEQALINTASGTVVNPLFLNHFGQMLDYNTNPIFALLHEAIYCQHTASQWA
CCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
AHRVRQQFPAFNYQQGKPFLFTGEMIYPWMFDQFSHLVPLKTAAEILAHKTDWPALYNLE
HHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHCCHH
QLAQNRVPVAAAIYSEDMFVEMQYSLETAQQVGRLKYWLTSEYEHNGIRMDGEHILDKLI
HHHHCCCCEEEEEECCCEEEEEHHHHHHHHHHHHHHEEEECCCCCCCEEECHHHHHHHHH
SLNRGDTLR
HCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7883756 [H]