| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is pip [H]
Identifier: 160875939
GI number: 160875939
Start: 3366679
End: 3367968
Strand: Direct
Name: pip [H]
Synonym: Sbal195_2828
Alternate gene names: 160875939
Gene position: 3366679-3367968 (Clockwise)
Preceding gene: 160875927
Following gene: 160875941
Centisome position: 62.96
GC content: 47.05
Gene sequence:
>1290_bases ATGAAACCCGATATTATTCTCGCCGGAGTGCTGGCGAAGAAACATACTTTTACCTTGCCCCTCAACTATCAAAATCCGAT TGCAGAGCAAATCCAAGTGTTTGCCAGAGAACTCTGTAGCCCAGAAAACAAAGATAAAAAGCTACCTTATATCGTGTTTT TCCAAGGCGGCCCGGGATTTGCGGCCATGCGCCCCGCCAGTAACAGCGGCTGGATCCGCCGCGCATTAAAAGAATATCGG GTATTATTACTCGATCAACGCGGCACAGGCTTATCAACACCCATTAATTACCAAAGCCTGCAACACTTAGAGCCCGCAGC TCAAGCTGAGTATCTAAGCCATTTCAGGGCTGACAATATCATTCGTGATGCAGAGACGATTCGTGCCCAGCTTTGCCCCG CCGATAAATGGGCAATTCTTGGCCAAAGTTTCGGGGGATTTTGCGTATTACATTATTTAAGCGCCGCCCCTCAAGGTGTC AGCGAAGCCTATATCACCGGCGGCATACCGTCATTAACCCGCAGTGCCGATGATGTCTATCTTGCAACTTATCAACGCGT GCTGGCGAAGAATAAACAATTTTTCCAACGCTTCCACGATGCCCAACATTTAGTGACTCGCTTAGCAAAACACTTGCTTG AAAATGAAGTGTATTTAGCAACGGGAGAACGCCTCACTGTTGAAATGTTGCAGCTGCTGGGTATTAATATCGGCATGGAG CAAGGGCCTGAATCGGTTTATTATTTACTTGAGCAGGCCTTAATCAACACAGCTTCTGGGACAGTCGTGAACCCGTTATT TTTAAATCATTTCGGTCAAATGCTCGATTACAACACTAACCCGATTTTTGCCCTGCTGCATGAGGCGATCTACTGCCAGC ACACAGCTTCACAATGGGCGGCGCACAGGGTAAGACAACAATTCCCCGCCTTTAACTATCAGCAAGGTAAGCCGTTTTTA TTCACCGGCGAGATGATTTACCCTTGGATGTTTGACCAATTCAGTCACTTAGTTCCGCTTAAAACCGCGGCTGAAATCCT TGCCCATAAAACAGATTGGCCTGCACTGTATAATCTTGAACAACTGGCGCAAAACCGCGTCCCCGTTGCCGCAGCTATTT ACAGTGAAGATATGTTTGTCGAGATGCAATACAGCCTTGAAACCGCGCAACAGGTCGGTAGGCTAAAGTATTGGTTAACG TCAGAATATGAACACAACGGCATTCGCATGGATGGTGAGCACATACTGGATAAGCTCATCAGCTTAAACCGAGGTGACAC CTTAAGATAA
Upstream 100 bases:
>100_bases ATACGTGTTTCAACTAGCCTAGGTTGCTGCATCTGCAGGTTATTTGGGTATACAATCTGCCAATCACAATAACATGATCC TCTGCCATTAAGGTTGTTTG
Downstream 100 bases:
>100_bases AGGTTAATTTTAAGGGCTAATTAAGTTAACGCTGACATTATAAACCTGCTCCTCATCTATTGAGTGATTTTGGCAAGTTT CAACGACCTATTTCCGTATG
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: PIP; Prolyl aminopeptidase; PAP [H]
Number of amino acids: Translated: 429; Mature: 429
Protein sequence:
>429_residues MKPDIILAGVLAKKHTFTLPLNYQNPIAEQIQVFARELCSPENKDKKLPYIVFFQGGPGFAAMRPASNSGWIRRALKEYR VLLLDQRGTGLSTPINYQSLQHLEPAAQAEYLSHFRADNIIRDAETIRAQLCPADKWAILGQSFGGFCVLHYLSAAPQGV SEAYITGGIPSLTRSADDVYLATYQRVLAKNKQFFQRFHDAQHLVTRLAKHLLENEVYLATGERLTVEMLQLLGINIGME QGPESVYYLLEQALINTASGTVVNPLFLNHFGQMLDYNTNPIFALLHEAIYCQHTASQWAAHRVRQQFPAFNYQQGKPFL FTGEMIYPWMFDQFSHLVPLKTAAEILAHKTDWPALYNLEQLAQNRVPVAAAIYSEDMFVEMQYSLETAQQVGRLKYWLT SEYEHNGIRMDGEHILDKLISLNRGDTLR
Sequences:
>Translated_429_residues MKPDIILAGVLAKKHTFTLPLNYQNPIAEQIQVFARELCSPENKDKKLPYIVFFQGGPGFAAMRPASNSGWIRRALKEYR VLLLDQRGTGLSTPINYQSLQHLEPAAQAEYLSHFRADNIIRDAETIRAQLCPADKWAILGQSFGGFCVLHYLSAAPQGV SEAYITGGIPSLTRSADDVYLATYQRVLAKNKQFFQRFHDAQHLVTRLAKHLLENEVYLATGERLTVEMLQLLGINIGME QGPESVYYLLEQALINTASGTVVNPLFLNHFGQMLDYNTNPIFALLHEAIYCQHTASQWAAHRVRQQFPAFNYQQGKPFL FTGEMIYPWMFDQFSHLVPLKTAAEILAHKTDWPALYNLEQLAQNRVPVAAAIYSEDMFVEMQYSLETAQQVGRLKYWLT SEYEHNGIRMDGEHILDKLISLNRGDTLR >Mature_429_residues MKPDIILAGVLAKKHTFTLPLNYQNPIAEQIQVFARELCSPENKDKKLPYIVFFQGGPGFAAMRPASNSGWIRRALKEYR VLLLDQRGTGLSTPINYQSLQHLEPAAQAEYLSHFRADNIIRDAETIRAQLCPADKWAILGQSFGGFCVLHYLSAAPQGV SEAYITGGIPSLTRSADDVYLATYQRVLAKNKQFFQRFHDAQHLVTRLAKHLLENEVYLATGERLTVEMLQLLGINIGME QGPESVYYLLEQALINTASGTVVNPLFLNHFGQMLDYNTNPIFALLHEAIYCQHTASQWAAHRVRQQFPAFNYQQGKPFL FTGEMIYPWMFDQFSHLVPLKTAAEILAHKTDWPALYNLEQLAQNRVPVAAAIYSEDMFVEMQYSLETAQQVGRLKYWLT SEYEHNGIRMDGEHILDKLISLNRGDTLR
Specific function: Higher activity toward long peptides. Acts on hydroxyproline beta-naphthylamide with almost as high an activity as on proline beta-naphthylamide [H]
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S33 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR002410 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.4.11.5 [H]
Molecular weight: Translated: 48786; Mature: 48786
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPDIILAGVLAKKHTFTLPLNYQNPIAEQIQVFARELCSPENKDKKLPYIVFFQGGPGF CCCCEEEEEEHHCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCC AAMRPASNSGWIRRALKEYRVLLLDQRGTGLSTPINYQSLQHLEPAAQAEYLSHFRADNI EEECCCCCCHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHH IRDAETIRAQLCPADKWAILGQSFGGFCVLHYLSAAPQGVSEAYITGGIPSLTRSADDVY HHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHCCCCCHHHCCCCHHH LATYQRVLAKNKQFFQRFHDAQHLVTRLAKHLLENEVYLATGERLTVEMLQLLGINIGME HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCCCCC QGPESVYYLLEQALINTASGTVVNPLFLNHFGQMLDYNTNPIFALLHEAIYCQHTASQWA CCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH AHRVRQQFPAFNYQQGKPFLFTGEMIYPWMFDQFSHLVPLKTAAEILAHKTDWPALYNLE HHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHCCHH QLAQNRVPVAAAIYSEDMFVEMQYSLETAQQVGRLKYWLTSEYEHNGIRMDGEHILDKLI HHHHCCCCEEEEEECCCEEEEEHHHHHHHHHHHHHHEEEECCCCCCCEEECHHHHHHHHH SLNRGDTLR HCCCCCCCC >Mature Secondary Structure MKPDIILAGVLAKKHTFTLPLNYQNPIAEQIQVFARELCSPENKDKKLPYIVFFQGGPGF CCCCEEEEEEHHCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCC AAMRPASNSGWIRRALKEYRVLLLDQRGTGLSTPINYQSLQHLEPAAQAEYLSHFRADNI EEECCCCCCHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHH IRDAETIRAQLCPADKWAILGQSFGGFCVLHYLSAAPQGVSEAYITGGIPSLTRSADDVY HHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHCCCCCHHHCCCCHHH LATYQRVLAKNKQFFQRFHDAQHLVTRLAKHLLENEVYLATGERLTVEMLQLLGINIGME HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCCCCC QGPESVYYLLEQALINTASGTVVNPLFLNHFGQMLDYNTNPIFALLHEAIYCQHTASQWA CCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH AHRVRQQFPAFNYQQGKPFLFTGEMIYPWMFDQFSHLVPLKTAAEILAHKTDWPALYNLE HHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHCCHH QLAQNRVPVAAAIYSEDMFVEMQYSLETAQQVGRLKYWLTSEYEHNGIRMDGEHILDKLI HHHHCCCCEEEEEECCCEEEEEHHHHHHHHHHHHHHEEEECCCCCCCEEECHHHHHHHHH SLNRGDTLR HCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7883756 [H]