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The map label for this gene is ycbL [H]

Identifier: 160875938

GI number: 160875938

Start: 3365779

End: 3366423

Strand: Reverse

Name: ycbL [H]

Synonym: Sbal195_2827

Alternate gene names: 160875938

Gene position: 3366423-3365779 (Counterclockwise)

Preceding gene: 160875940

Following gene: 160875937

Centisome position: 62.96

GC content: 47.13

Gene sequence:

>645_bases
ATGAAGTATCAGATTATTCCAGTGACACCTTTTCAGCAAAATTGCAGCCTGATCTGGTGTGAAAAAACCAAGCGAGCTGC
GGTCGTGGATCCTGGTGGCAATATTGACAGGATCCAAAATGAAGTGACGAAACTTGGACTCGTCCTTGACCAAATTATCC
TTACCCATGGGCATATCGATCATGTCGGTGGGGCAAAAGCCTTAGCGCAAGCCGCCAATGTGCCGATTATTGGCCCGCAT
ATCGCCGATAAATTCTGGATTGACAACTTACCTAAGCAAAGCCAAAACTTCGGTTTTCCCCATTGCGATGCCTTTGAACC
GGATCAATATCTGCAGGATGGCGATATTGTTAAAGTGGGCGAGCAAAGTTTATCTGTGCTGCATTGCCCTGGGCATACGC
CGGGACACATTGCACTTTTCTCTGCCCAATCTAAATTGGCGTGGGTGGGGGATATTTTGTTTAGAAGTTCAATCGGCCGC
ACCGACTTTCCTCAATCAAATCATCAGGATTTAATTCACTCGATCACCGAAAAACTGTGGCCCTTAGGTGTCGACGTCGA
ATTTATTCCGGGGCATGGTCCTATATCGACCTTTGGTGAAGAGCGCGAGCATAATCCCTTTGTCGCGGACCAACTTTTAC
TCTAA

Upstream 100 bases:

>100_bases
GATTAGCTTTTGGTGAAGATCAATTTTTCCATTTTAAATTTGAGCCATGATGAGTTTCTTAGCGTAATCTATCGCTTATG
GATAACACGAGATTGAAGCT

Downstream 100 bases:

>100_bases
GTGTCACGTCATTAAGAACTGTTTGATTTGTGAGCGATAATCACTCGCAAATCAAATGATTATTTTCATTGATTGTCCCA
CTTTTACCGATGTTTTCTGA

Product: beta-lactamase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MKYQIIPVTPFQQNCSLIWCEKTKRAAVVDPGGNIDRIQNEVTKLGLVLDQIILTHGHIDHVGGAKALAQAANVPIIGPH
IADKFWIDNLPKQSQNFGFPHCDAFEPDQYLQDGDIVKVGEQSLSVLHCPGHTPGHIALFSAQSKLAWVGDILFRSSIGR
TDFPQSNHQDLIHSITEKLWPLGVDVEFIPGHGPISTFGEEREHNPFVADQLLL

Sequences:

>Translated_214_residues
MKYQIIPVTPFQQNCSLIWCEKTKRAAVVDPGGNIDRIQNEVTKLGLVLDQIILTHGHIDHVGGAKALAQAANVPIIGPH
IADKFWIDNLPKQSQNFGFPHCDAFEPDQYLQDGDIVKVGEQSLSVLHCPGHTPGHIALFSAQSKLAWVGDILFRSSIGR
TDFPQSNHQDLIHSITEKLWPLGVDVEFIPGHGPISTFGEEREHNPFVADQLLL
>Mature_214_residues
MKYQIIPVTPFQQNCSLIWCEKTKRAAVVDPGGNIDRIQNEVTKLGLVLDQIILTHGHIDHVGGAKALAQAANVPIIGPH
IADKFWIDNLPKQSQNFGFPHCDAFEPDQYLQDGDIVKVGEQSLSVLHCPGHTPGHIALFSAQSKLAWVGDILFRSSIGR
TDFPQSNHQDLIHSITEKLWPLGVDVEFIPGHGPISTFGEEREHNPFVADQLLL

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]

Homologues:

Organism=Homo sapiens, GI41327741, Length=195, Percent_Identity=28.7179487179487, Blast_Score=76, Evalue=2e-14,
Organism=Homo sapiens, GI42822880, Length=219, Percent_Identity=27.3972602739726, Blast_Score=65, Evalue=5e-11,
Organism=Homo sapiens, GI7705793, Length=161, Percent_Identity=28.5714285714286, Blast_Score=64, Evalue=7e-11,
Organism=Escherichia coli, GI1787158, Length=212, Percent_Identity=55.6603773584906, Blast_Score=262, Evalue=1e-71,
Organism=Caenorhabditis elegans, GI17538952, Length=195, Percent_Identity=29.7435897435897, Blast_Score=77, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 23659; Mature: 23659

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYQIIPVTPFQQNCSLIWCEKTKRAAVVDPGGNIDRIQNEVTKLGLVLDQIILTHGHID
CCEEEEECCCCCCCCCEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
HVGGAKALAQAANVPIIGPHIADKFWIDNLPKQSQNFGFPHCDAFEPDQYLQDGDIVKVG
CCCHHHHHHHHCCCCEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCEEEEC
EQSLSVLHCPGHTPGHIALFSAQSKLAWVGDILFRSSIGRTDFPQSNHQDLIHSITEKLW
CCCEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHC
PLGVDVEFIPGHGPISTFGEEREHNPFVADQLLL
CCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHCC
>Mature Secondary Structure
MKYQIIPVTPFQQNCSLIWCEKTKRAAVVDPGGNIDRIQNEVTKLGLVLDQIILTHGHID
CCEEEEECCCCCCCCCEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
HVGGAKALAQAANVPIIGPHIADKFWIDNLPKQSQNFGFPHCDAFEPDQYLQDGDIVKVG
CCCHHHHHHHHCCCCEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCEEEEC
EQSLSVLHCPGHTPGHIALFSAQSKLAWVGDILFRSSIGRTDFPQSNHQDLIHSITEKLW
CCCEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHC
PLGVDVEFIPGHGPISTFGEEREHNPFVADQLLL
CCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]