| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is iorA [H]
Identifier: 160875934
GI number: 160875934
Start: 3361229
End: 3361747
Strand: Reverse
Name: iorA [H]
Synonym: Sbal195_2823
Alternate gene names: 160875934
Gene position: 3361747-3361229 (Counterclockwise)
Preceding gene: 160875935
Following gene: 160875933
Centisome position: 62.87
GC content: 51.45
Gene sequence:
>519_bases ATGGCAGAAGTTTTATCAACCAAAGCAGTCGTCAAGGAAGCGAATACCGTCGCTTCCACCCAGACACTTTCCGCTCAGAC ACTGACCATCAACGGTAAATCATTTACCTTAGATGCCGATCCTAAAATGCCAATCCTGTGGGCACTACGGGATATTTTAG GGCTCACGGGCACTAAATATGGCTGCGGTGCAGGGCTATGCGGTGCTTGCACTGTGCATTTAGACGGCCAACCCGTACGC GCCTGTTTAACCAGTTTGGGGCAGGCACAAGGAAAACGTCTGACAACAATTGAAGGGCTAGATAATCAAAAGCTTAAAAA TGCTTGGGCCGAACATAACGTGCCCCAGTGCGGCTATTGTCAGGCGGGCCAACTGATGTCGGCTGCGGCGTTAGTGGCGC AGCATCCGAAACCTTCTGAAGAACAAATCAACTCGGCCATGTCGGGGAATATCTGCCGCTGCGGTACATACCCGCGGATT AAAGCGGCACTGCAAAACTATGCCAAACAGGAGGGCTAA
Upstream 100 bases:
>100_bases ACAGCAGGGAGCGTTAGTCGCTATAACACTACCCCGCGCCGCAATTGATATTGATACCCAAGCCGATCTTGCGTCGTGGT TGGCACTTAAGGAGTGAGTT
Downstream 100 bases:
>100_bases TATGAGTACTTTTACTGCCGTAGAAAATATCAGCCGCCGCGATGTGTTAAAACTGTTTGGCGCAGTGGGTGGCGGATTAG CATTAGGGGCGAGTGGACTA
Product: 2Fe-2S iron-sulfur cluster-binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MAEVLSTKAVVKEANTVASTQTLSAQTLTINGKSFTLDADPKMPILWALRDILGLTGTKYGCGAGLCGACTVHLDGQPVR ACLTSLGQAQGKRLTTIEGLDNQKLKNAWAEHNVPQCGYCQAGQLMSAAALVAQHPKPSEEQINSAMSGNICRCGTYPRI KAALQNYAKQEG
Sequences:
>Translated_172_residues MAEVLSTKAVVKEANTVASTQTLSAQTLTINGKSFTLDADPKMPILWALRDILGLTGTKYGCGAGLCGACTVHLDGQPVR ACLTSLGQAQGKRLTTIEGLDNQKLKNAWAEHNVPQCGYCQAGQLMSAAALVAQHPKPSEEQINSAMSGNICRCGTYPRI KAALQNYAKQEG >Mature_171_residues AEVLSTKAVVKEANTVASTQTLSAQTLTINGKSFTLDADPKMPILWALRDILGLTGTKYGCGAGLCGACTVHLDGQPVRA CLTSLGQAQGKRLTTIEGLDNQKLKNAWAEHNVPQCGYCQAGQLMSAAALVAQHPKPSEEQINSAMSGNICRCGTYPRIK AALQNYAKQEG
Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]
COG id: COG2080
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Homo sapiens, GI91823271, Length=156, Percent_Identity=35.8974358974359, Blast_Score=71, Evalue=4e-13, Organism=Homo sapiens, GI71773480, Length=101, Percent_Identity=32.6732673267327, Blast_Score=69, Evalue=3e-12, Organism=Escherichia coli, GI1786480, Length=163, Percent_Identity=40.4907975460123, Blast_Score=116, Evalue=9e-28, Organism=Escherichia coli, GI1789232, Length=141, Percent_Identity=38.2978723404255, Blast_Score=89, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17539860, Length=155, Percent_Identity=36.7741935483871, Blast_Score=103, Evalue=6e-23, Organism=Caenorhabditis elegans, GI32566215, Length=165, Percent_Identity=35.7575757575758, Blast_Score=102, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17540638, Length=176, Percent_Identity=34.0909090909091, Blast_Score=100, Evalue=4e-22, Organism=Drosophila melanogaster, GI17737937, Length=157, Percent_Identity=36.3057324840764, Blast_Score=92, Evalue=2e-19, Organism=Drosophila melanogaster, GI24647193, Length=163, Percent_Identity=35.5828220858896, Blast_Score=79, Evalue=1e-15, Organism=Drosophila melanogaster, GI24647201, Length=155, Percent_Identity=33.5483870967742, Blast_Score=78, Evalue=2e-15, Organism=Drosophila melanogaster, GI24647195, Length=160, Percent_Identity=32.5, Blast_Score=76, Evalue=9e-15, Organism=Drosophila melanogaster, GI24647197, Length=160, Percent_Identity=32.5, Blast_Score=76, Evalue=1e-14, Organism=Drosophila melanogaster, GI24647199, Length=154, Percent_Identity=32.4675324675325, Blast_Score=72, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002888 - InterPro: IPR006058 - InterPro: IPR012675 - InterPro: IPR001041 [H]
Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]
EC number: =1.3.99.16 [H]
Molecular weight: Translated: 18178; Mature: 18047
Theoretical pI: Translated: 8.40; Mature: 8.40
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEVLSTKAVVKEANTVASTQTLSAQTLTINGKSFTLDADPKMPILWALRDILGLTGTKY CCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEECCCCCCHHHHHHHHHHHCCCCCC GCGAGLCGACTVHLDGQPVRACLTSLGQAQGKRLTTIEGLDNQKLKNAWAEHNVPQCGYC CCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCCCCC QAGQLMSAAALVAQHPKPSEEQINSAMSGNICRCGTYPRIKAALQNYAKQEG CHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEECCCCHHHHHHHHHHHHCCC >Mature Secondary Structure AEVLSTKAVVKEANTVASTQTLSAQTLTINGKSFTLDADPKMPILWALRDILGLTGTKY CCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEECCCCCCHHHHHHHHHHHCCCCCC GCGAGLCGACTVHLDGQPVRACLTSLGQAQGKRLTTIEGLDNQKLKNAWAEHNVPQCGYC CCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCCCCC QAGQLMSAAALVAQHPKPSEEQINSAMSGNICRCGTYPRIKAALQNYAKQEG CHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEECCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7782304; 8157655 [H]