Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is 160875904
Identifier: 160875904
GI number: 160875904
Start: 3327711
End: 3328010
Strand: Direct
Name: 160875904
Synonym: Sbal195_2793
Alternate gene names: NA
Gene position: 3327711-3328010 (Clockwise)
Preceding gene: 160875903
Following gene: 160875905
Centisome position: 62.23
GC content: 45.67
Gene sequence:
>300_bases ATGACTTACAAGCAAGCGCAGACTCGTTTTGGCATTCAGGGTAAAACAACAGTACTCGTCTGGCTGAGAAAGCATGGTAA ACTCGATTGGTCGAAACCCTTTCAGCATCCCCTTATGCCTCATTCAAAAGAAACCCCAGCCGAAACTATCAAGCGCCTTG AGCGTGAGTTAGCCGAAGCGAAACTGCGTAACCAAATTCTCAATGGTATGGTCGATATCATGGACAATGAATACGGAGCC GGCCTCAGAAAAAAGTACTTATCCGGTATCTCTGGCAAGCCAAAACCCAAAGCAAAATAA
Upstream 100 bases:
>100_bases TTTATGACAACATCAAGTAACTCAAGCCGTAAGCGTTACTCAACGCGATTACACCTTAGCTTTTAAATTAGGCGTTGTTG AACGTGTTGAAAAAGGCGAA
Downstream 100 bases:
>100_bases ACCTTGCCGTTGCGTGTCGCGCTGTCGGTATTTCACGGCAAGGTATTTATCAGGCTGTCGCCCGAATGGCGAGCCGAAGC ACTGAGCTATCGGTCATCAA
Product: transposase
Products: NA
Alternate protein names: ISPsy11 Transposase OrfA; Transposase OrfA; Cytoplasmic Protein; ISVisp4 Transposase OrfA
Number of amino acids: Translated: 99; Mature: 98
Protein sequence:
>99_residues MTYKQAQTRFGIQGKTTVLVWLRKHGKLDWSKPFQHPLMPHSKETPAETIKRLERELAEAKLRNQILNGMVDIMDNEYGA GLRKKYLSGISGKPKPKAK
Sequences:
>Translated_99_residues MTYKQAQTRFGIQGKTTVLVWLRKHGKLDWSKPFQHPLMPHSKETPAETIKRLERELAEAKLRNQILNGMVDIMDNEYGA GLRKKYLSGISGKPKPKAK >Mature_98_residues TYKQAQTRFGIQGKTTVLVWLRKHGKLDWSKPFQHPLMPHSKETPAETIKRLERELAEAKLRNQILNGMVDIMDNEYGAG LRKKYLSGISGKPKPKAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11360; Mature: 11229
Theoretical pI: Translated: 10.84; Mature: 10.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYKQAQTRFGIQGKTTVLVWLRKHGKLDWSKPFQHPLMPHSKETPAETIKRLERELAEA CCCCCCHHHCCCCCCCHHEEEEHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH KLRNQILNGMVDIMDNEYGAGLRKKYLSGISGKPKPKAK HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TYKQAQTRFGIQGKTTVLVWLRKHGKLDWSKPFQHPLMPHSKETPAETIKRLERELAEA CCCCCHHHCCCCCCCHHEEEEHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH KLRNQILNGMVDIMDNEYGAGLRKKYLSGISGKPKPKAK HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA