Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is 160875897
Identifier: 160875897
GI number: 160875897
Start: 3317828
End: 3318895
Strand: Direct
Name: 160875897
Synonym: Sbal195_2786
Alternate gene names: NA
Gene position: 3317828-3318895 (Clockwise)
Preceding gene: 160875896
Following gene: 160875900
Centisome position: 62.05
GC content: 45.22
Gene sequence:
>1068_bases ATGTCCCTTAGCCATCAGCAAAAAGTGTACATACCCAAGGAAGCCCGTACCAATCAATACATCACAGCCGAAATCAAGGT GACGGATGAACTACTGAGTCAATATCCTGATTATCAAAGCTGTTATCAAACCTTAAGCCGTTTGATATTTAATTTGGCAG AACAACACGATCTGCGTAATGTCCACGTGATCACTAACGATAAACTGCCTGTTGTCCGTTACCATACCGAAGCATATTGC TTCCAAACCACTGAACAAATTCTATTTTTTTATAATCCAGCCTACCACGAAGCCCAAAATTTATTCTCGCAAGAAAACTA TCGCGCCCGTAAACTGCGCATTGTCTTCCTTGCCACGGGTGAAGATATCCGCAGTAATTCCGCCAGTTTCCACATTAGAG TGCGCGAATTACTGACAGAATTGATGCCTTTAATGCCGATAAGCGATCTTAAAGTTAAGGTCCGCGACCATCAGCATTTA TCCTATGATCTGTTCGCAAAAGCCAAGGGCTATAAAGAAACCTATGGCTATAAACTGCGTGCCATCGGCCCAAGATATAA AGCCAGAAAGTGCGAATTACCAGAGAACGTCAGCTCTCTCACTTATGTAACAGTAAGCTTGCCACTGAGTCGTAAACTTA AGCAGGGTTTATTACCTGACTCAGCAACCGACTTTACGCCGTTATATCAACATCTTGAAGATTGCTTCCTCAAAGCGGCA GCCAACAGACAATTGACGCGTCTTGCCATGATAGCAAACGGCTTAACCCCGCTGGTGCGTAACAGTAAGTTTGAAAAACT CGACAGCAAAGCCGAAGTACAAATGATAGGGTTCGATCCTAATGCGACTGAGCAACAAGTGATCCGTCGCTGGAATGCCG ATAACTTAGTCGAAGCCGCGCACTTCACCATAGTCGCGGGCACCAAAGACTGTGATGATTCAGGCTTCGGACGCTTTATG AACAATGTCGAAACAGCCCTGAAGGCCTTCGCCGCAGATATCGGTGTAGACCCAGAGCGTGAAGATCTCGTCGTACGCTT CCATCAACATATCAGCTATCAAATCTGA
Upstream 100 bases:
>100_bases CATGCTCAACGGATAAAAACGTGTTCTAACGCAAGATTAACCCTATAGATAAACAGTAAAATTCGTGTTAGCAAATGGTT AACTCAAACAAGGAGTCAAT
Downstream 100 bases:
>100_bases TTAACGCGACATTCGATTCGCTAAAACCCAAAGGGCGCATTAAGCGCCCTTTTCTTTCTGAATGTATTCAAGCTGATATC GGGTGATAACCTAGCTTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MSLSHQQKVYIPKEARTNQYITAEIKVTDELLSQYPDYQSCYQTLSRLIFNLAEQHDLRNVHVITNDKLPVVRYHTEAYC FQTTEQILFFYNPAYHEAQNLFSQENYRARKLRIVFLATGEDIRSNSASFHIRVRELLTELMPLMPISDLKVKVRDHQHL SYDLFAKAKGYKETYGYKLRAIGPRYKARKCELPENVSSLTYVTVSLPLSRKLKQGLLPDSATDFTPLYQHLEDCFLKAA ANRQLTRLAMIANGLTPLVRNSKFEKLDSKAEVQMIGFDPNATEQQVIRRWNADNLVEAAHFTIVAGTKDCDDSGFGRFM NNVETALKAFAADIGVDPEREDLVVRFHQHISYQI
Sequences:
>Translated_355_residues MSLSHQQKVYIPKEARTNQYITAEIKVTDELLSQYPDYQSCYQTLSRLIFNLAEQHDLRNVHVITNDKLPVVRYHTEAYC FQTTEQILFFYNPAYHEAQNLFSQENYRARKLRIVFLATGEDIRSNSASFHIRVRELLTELMPLMPISDLKVKVRDHQHL SYDLFAKAKGYKETYGYKLRAIGPRYKARKCELPENVSSLTYVTVSLPLSRKLKQGLLPDSATDFTPLYQHLEDCFLKAA ANRQLTRLAMIANGLTPLVRNSKFEKLDSKAEVQMIGFDPNATEQQVIRRWNADNLVEAAHFTIVAGTKDCDDSGFGRFM NNVETALKAFAADIGVDPEREDLVVRFHQHISYQI >Mature_354_residues SLSHQQKVYIPKEARTNQYITAEIKVTDELLSQYPDYQSCYQTLSRLIFNLAEQHDLRNVHVITNDKLPVVRYHTEAYCF QTTEQILFFYNPAYHEAQNLFSQENYRARKLRIVFLATGEDIRSNSASFHIRVRELLTELMPLMPISDLKVKVRDHQHLS YDLFAKAKGYKETYGYKLRAIGPRYKARKCELPENVSSLTYVTVSLPLSRKLKQGLLPDSATDFTPLYQHLEDCFLKAAA NRQLTRLAMIANGLTPLVRNSKFEKLDSKAEVQMIGFDPNATEQQVIRRWNADNLVEAAHFTIVAGTKDCDDSGFGRFMN NVETALKAFAADIGVDPEREDLVVRFHQHISYQI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40952; Mature: 40821
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSHQQKVYIPKEARTNQYITAEIKVTDELLSQYPDYQSCYQTLSRLIFNLAEQHDLRN CCCCCCCEEEECCCCCCCCEEEEEEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCE VHVITNDKLPVVRYHTEAYCFQTTEQILFFYNPAYHEAQNLFSQENYRARKLRIVFLATG EEEEECCCCCEEEEECHHHHHCCCCCEEEEECCHHHHHHHHHHCCCCCEEEEEEEEEECC EDIRSNSASFHIRVRELLTELMPLMPISDLKVKVRDHQHLSYDLFAKAKGYKETYGYKLR CCCCCCCCEEEEEHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHCCCCHHHHCEEEE AIGPRYKARKCELPENVSSLTYVTVSLPLSRKLKQGLLPDSATDFTPLYQHLEDCFLKAA ECCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH ANRQLTRLAMIANGLTPLVRNSKFEKLDSKAEVQMIGFDPNATEQQVIRRWNADNLVEAA CCCHHHHHHHHHCCCCHHHCCCCHHHCCCCCEEEEEECCCCCHHHHHHHHCCCCCHHHHE HFTIVAGTKDCDDSGFGRFMNNVETALKAFAADIGVDPEREDLVVRFHQHISYQI EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure SLSHQQKVYIPKEARTNQYITAEIKVTDELLSQYPDYQSCYQTLSRLIFNLAEQHDLRN CCCCCCEEEECCCCCCCCEEEEEEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCE VHVITNDKLPVVRYHTEAYCFQTTEQILFFYNPAYHEAQNLFSQENYRARKLRIVFLATG EEEEECCCCCEEEEECHHHHHCCCCCEEEEECCHHHHHHHHHHCCCCCEEEEEEEEEECC EDIRSNSASFHIRVRELLTELMPLMPISDLKVKVRDHQHLSYDLFAKAKGYKETYGYKLR CCCCCCCCEEEEEHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHCCCCHHHHCEEEE AIGPRYKARKCELPENVSSLTYVTVSLPLSRKLKQGLLPDSATDFTPLYQHLEDCFLKAA ECCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH ANRQLTRLAMIANGLTPLVRNSKFEKLDSKAEVQMIGFDPNATEQQVIRRWNADNLVEAA CCCHHHHHHHHHCCCCHHHCCCCHHHCCCCCEEEEEECCCCCHHHHHHHHCCCCCHHHHE HFTIVAGTKDCDDSGFGRFMNNVETALKAFAADIGVDPEREDLVVRFHQHISYQI EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA