Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is btuB [H]
Identifier: 160875878
GI number: 160875878
Start: 3293152
End: 3295926
Strand: Direct
Name: btuB [H]
Synonym: Sbal195_2767
Alternate gene names: 160875878
Gene position: 3293152-3295926 (Clockwise)
Preceding gene: 160875877
Following gene: 160875880
Centisome position: 61.59
GC content: 41.26
Gene sequence:
>2775_bases ATGCGCGCAAATTCTACATTAGCCAAAGCTGTTCGCTTTGCGTTAATAGGTGGAGCTACTACAGCTGCTTTATCAACGTC AGCTGTATTTGCTGCTGAAGACGGTGCAAAAGTAGAACGTATTGCTGTAACAGGTTCTCGCATTCAAAGAACCAATTTAG AAACATCTACACCTATAACGATGTTTTCTGCAGCAGACATAGAAAAAACAGGCTTTTCTACCGTTTCTGAGTTTTTAAGA ACGAATGCAGCCTCTGGTGGTTTCAATGAATCATCAACTTTAAGCCAAGCCGCTGGTGCGTCATCGATTGGTGTAAAAGG ATTTGGTTCCGATTATACACTTATTTTATTGAACGGCCGTCGCATAGCAAAGAATACCGCAGGCGGCATTTTTACTGACG TAAACCAAGTGCCTATGGCAGCAGTTGAGCGAATCGACATCCTTAATGATGGTGCTTCTGCAATTTATGGTTCTGATGCG GTTGCTGGTGTAATAAACATTATTACTAAGAAAGAATTTGATGGCGTCGCATTGAGTGCCAAATATGGCGGTGCGACAAA TAAGTGGGATGGTAATGAATTATCAGCATCAATTGTTACCGGTACAAGTAACGAGAAAACCAGTATCCTATTCTCTGCAG AACATTTCGCTCGAGATGTAATTCAAGCATCTGATCGTGAATTTGGTCGTACAGCATTGATAGAAGGTCACGAAGGTGGG GATGGAAGATCAACTTGGGGAATTCCTGGTTTTACTTCAATAAGTTCTGCAAAAGGTTTCACAAATGCTGCGACTGACGA AGGGTCTAAACCTTGGTCAAACTGCCCTGCAGGTGATGTCTTATCAAGTGGTCGTTGTGCTTACGATTTTGCACATTTAT ATCAACTTCAGCCAGAGTCTGAACGCCAGTCAATCTTTACTACCATTAATCATGAGATGAATGATGACCTGACGTTTAAT GGTCAATTCCGTTACACTCGTGCTTATACTAAGACCTCGAATGCCCCGGCCCCAGGTCAAGTAGATGTATCCAACAGCCC ATTCCTAGCGGATTTTTTACGTAATGACCGTTATAAAGATGACCAAGCAAAAGCAGAAGAAATTATTCGTTTAGTTGAAG CGGGTGAAGCCAATGTTAGCGTCGGCCGCCGTTACCTTGATTTCGGAAATCGTGAAAAAGACAACACAAATGAAACATTC GAAGCAGTAGGTGGTGCAAACTACAACATCGACGACAATTGGGGTCTAAACTTTGATATTGGTTTTTCTCGTTTAACCAA CCGTCAAATTGGTTCATCTGGTCAATTATTGTCAGAAGAAGTCGCCAATGCATTCAATGACCCTAAGTCAAAACTGAATC CATTCGTTATTAATGACTGTAGTTCAAAAGATTTATCTGATACATGCCGAGATCTACAAGTAGCCATTCATCGTACGGGT GAATATACAGTCTCTTTCTCTTCTCTTGTCTTATCAGGACTGCTCCCTGGTATTGAATTACCTGGTGGTGAAATTGGCCT AGCGACGGGTTTAGACATGCGCGAAGAAAAATATACCGATCGTTCAGATCCTGCAACCGTAGGTGGTCAAGTTATCGGTG GTGCAGGTTCAAATGGCGGTGGTCAATTCAGTAATCTTGCCGGTTTCATAGAACTTTCATTACCTGTACTTGATAATCTA GAAGTAAGCCTAGCTGCTAGACAAGACAAAGCAGATTGGGAGCTAGCTGATGCGAGTGATACGACTTATTCAGCCAAACT ATCATATCGTCCTATTGATGACTTATTGCTACGGGCATCATATGGTACAGGCTTTAAAGCTCCAAACCTAAGCGATTTGT TCCTAGCCGAATCGTCTGGCGTCACTAGAGCCATTGATACTAAACTGTGTAATGCTGCAGGTAATGTTCAAAACCACCCT GATTGTCAACGCCAAGAGTTAAACTCGAAAAGTGGCGGCAACCCAGATTTAACACCAGAAAAATCAAAGTCTTATAACCT TGGCGCAGTTTATCAGTTTACAGATAATTTATCACTATCTGTCGATTTCTGGTCACTTAAAATAGATGACGTTGTAGGTA GCCTTGCTATTCAAGAAATTCTGGATGAAGAAGCAAAAGGTAATTTGACTAACTTAGTCGTGCGTAACTCTGAAGGCCGT CTAACTGACTCTAACAGAGACGGTTATGTTCAAACTAACAAACAAAACCTGACAGAGCAGAGTGCAACTGGCTTAAACTA TGATCTTCAATATAGCAGTGAATTCTCATTTGGTACTTTGAAGTCAAGCTTACAAGCAGAACAGTTCCTAAGCTATAAAA CGCAATCTTCAGCAGTACAACCTTTATGTGATGATATTGCTGATAATTCAATGCGTGACTATCGTATTAACGGCAGCATT TCATTAGAACAAAATGATTTTGTAACCTCACTTAATATGCGTTACCTCCCTGGGTACGAAATGTATGATAAGCGTAATAC AGGTAACAAGTCTTGCCAATTGGTTGGTTACTATGATGTTGGCAAGGCTACAGATGTCGATGCAAATGGTGATTTAGTGA ACCCAGGCAGAAGTCAACATGTGGCAGCTTATGTACAGTTTGATTTAACAACAGCTTACTATTTTGCTGATGATAACAAA GTCACCTTAGGGGTCCGTAACTTACTGGATAGACAGCCATCATTCAGTGCACCAAACAACTGGCCTTTCTATGATCAAGG TGTCTATGACAATATCGGCCGCTTCGTTTATCTACAATATGATGTGAAGTTCTAA
Upstream 100 bases:
>100_bases TTATATCCTGAGCTTAATTAAATGAGTGCTTATTCTTTACATAAGTAACCATTTAAGAAAAATAAAAATAAACATACAAC ATGTGTTAAGGGAGAATAAA
Downstream 100 bases:
>100_bases TATCGTCTTTATCAATTAGAACCTAATCAAAAAACGGCATCTTCTGATGCCGTTTTTATTTTCTTCATTTACGAAGCCCG GTGAATAGGCATAAAAATGC
Product: TonB-dependent receptor
Products: NA
Alternate protein names: Cobalamin receptor; Outer membrane cobalamin translocator [H]
Number of amino acids: Translated: 924; Mature: 924
Protein sequence:
>924_residues MRANSTLAKAVRFALIGGATTAALSTSAVFAAEDGAKVERIAVTGSRIQRTNLETSTPITMFSAADIEKTGFSTVSEFLR TNAASGGFNESSTLSQAAGASSIGVKGFGSDYTLILLNGRRIAKNTAGGIFTDVNQVPMAAVERIDILNDGASAIYGSDA VAGVINIITKKEFDGVALSAKYGGATNKWDGNELSASIVTGTSNEKTSILFSAEHFARDVIQASDREFGRTALIEGHEGG DGRSTWGIPGFTSISSAKGFTNAATDEGSKPWSNCPAGDVLSSGRCAYDFAHLYQLQPESERQSIFTTINHEMNDDLTFN GQFRYTRAYTKTSNAPAPGQVDVSNSPFLADFLRNDRYKDDQAKAEEIIRLVEAGEANVSVGRRYLDFGNREKDNTNETF EAVGGANYNIDDNWGLNFDIGFSRLTNRQIGSSGQLLSEEVANAFNDPKSKLNPFVINDCSSKDLSDTCRDLQVAIHRTG EYTVSFSSLVLSGLLPGIELPGGEIGLATGLDMREEKYTDRSDPATVGGQVIGGAGSNGGGQFSNLAGFIELSLPVLDNL EVSLAARQDKADWELADASDTTYSAKLSYRPIDDLLLRASYGTGFKAPNLSDLFLAESSGVTRAIDTKLCNAAGNVQNHP DCQRQELNSKSGGNPDLTPEKSKSYNLGAVYQFTDNLSLSVDFWSLKIDDVVGSLAIQEILDEEAKGNLTNLVVRNSEGR LTDSNRDGYVQTNKQNLTEQSATGLNYDLQYSSEFSFGTLKSSLQAEQFLSYKTQSSAVQPLCDDIADNSMRDYRINGSI SLEQNDFVTSLNMRYLPGYEMYDKRNTGNKSCQLVGYYDVGKATDVDANGDLVNPGRSQHVAAYVQFDLTTAYYFADDNK VTLGVRNLLDRQPSFSAPNNWPFYDQGVYDNIGRFVYLQYDVKF
Sequences:
>Translated_924_residues MRANSTLAKAVRFALIGGATTAALSTSAVFAAEDGAKVERIAVTGSRIQRTNLETSTPITMFSAADIEKTGFSTVSEFLR TNAASGGFNESSTLSQAAGASSIGVKGFGSDYTLILLNGRRIAKNTAGGIFTDVNQVPMAAVERIDILNDGASAIYGSDA VAGVINIITKKEFDGVALSAKYGGATNKWDGNELSASIVTGTSNEKTSILFSAEHFARDVIQASDREFGRTALIEGHEGG DGRSTWGIPGFTSISSAKGFTNAATDEGSKPWSNCPAGDVLSSGRCAYDFAHLYQLQPESERQSIFTTINHEMNDDLTFN GQFRYTRAYTKTSNAPAPGQVDVSNSPFLADFLRNDRYKDDQAKAEEIIRLVEAGEANVSVGRRYLDFGNREKDNTNETF EAVGGANYNIDDNWGLNFDIGFSRLTNRQIGSSGQLLSEEVANAFNDPKSKLNPFVINDCSSKDLSDTCRDLQVAIHRTG EYTVSFSSLVLSGLLPGIELPGGEIGLATGLDMREEKYTDRSDPATVGGQVIGGAGSNGGGQFSNLAGFIELSLPVLDNL EVSLAARQDKADWELADASDTTYSAKLSYRPIDDLLLRASYGTGFKAPNLSDLFLAESSGVTRAIDTKLCNAAGNVQNHP DCQRQELNSKSGGNPDLTPEKSKSYNLGAVYQFTDNLSLSVDFWSLKIDDVVGSLAIQEILDEEAKGNLTNLVVRNSEGR LTDSNRDGYVQTNKQNLTEQSATGLNYDLQYSSEFSFGTLKSSLQAEQFLSYKTQSSAVQPLCDDIADNSMRDYRINGSI SLEQNDFVTSLNMRYLPGYEMYDKRNTGNKSCQLVGYYDVGKATDVDANGDLVNPGRSQHVAAYVQFDLTTAYYFADDNK VTLGVRNLLDRQPSFSAPNNWPFYDQGVYDNIGRFVYLQYDVKF >Mature_924_residues MRANSTLAKAVRFALIGGATTAALSTSAVFAAEDGAKVERIAVTGSRIQRTNLETSTPITMFSAADIEKTGFSTVSEFLR TNAASGGFNESSTLSQAAGASSIGVKGFGSDYTLILLNGRRIAKNTAGGIFTDVNQVPMAAVERIDILNDGASAIYGSDA VAGVINIITKKEFDGVALSAKYGGATNKWDGNELSASIVTGTSNEKTSILFSAEHFARDVIQASDREFGRTALIEGHEGG DGRSTWGIPGFTSISSAKGFTNAATDEGSKPWSNCPAGDVLSSGRCAYDFAHLYQLQPESERQSIFTTINHEMNDDLTFN GQFRYTRAYTKTSNAPAPGQVDVSNSPFLADFLRNDRYKDDQAKAEEIIRLVEAGEANVSVGRRYLDFGNREKDNTNETF EAVGGANYNIDDNWGLNFDIGFSRLTNRQIGSSGQLLSEEVANAFNDPKSKLNPFVINDCSSKDLSDTCRDLQVAIHRTG EYTVSFSSLVLSGLLPGIELPGGEIGLATGLDMREEKYTDRSDPATVGGQVIGGAGSNGGGQFSNLAGFIELSLPVLDNL EVSLAARQDKADWELADASDTTYSAKLSYRPIDDLLLRASYGTGFKAPNLSDLFLAESSGVTRAIDTKLCNAAGNVQNHP DCQRQELNSKSGGNPDLTPEKSKSYNLGAVYQFTDNLSLSVDFWSLKIDDVVGSLAIQEILDEEAKGNLTNLVVRNSEGR LTDSNRDGYVQTNKQNLTEQSATGLNYDLQYSSEFSFGTLKSSLQAEQFLSYKTQSSAVQPLCDDIADNSMRDYRINGSI SLEQNDFVTSLNMRYLPGYEMYDKRNTGNKSCQLVGYYDVGKATDVDANGDLVNPGRSQHVAAYVQFDLTTAYYFADDNK VTLGVRNLLDRQPSFSAPNNWPFYDQGVYDNIGRFVYLQYDVKF
Specific function: Involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space. It derives its energy for transport by interacting with the trans-periplasmic membrane protein TonB [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TonB-dependent receptor family. BtuB (TC 1.B.14.3.1) subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788478, Length=163, Percent_Identity=28.2208588957055, Blast_Score=77, Evalue=4e-15, Organism=Escherichia coli, GI1790405, Length=164, Percent_Identity=29.2682926829268, Blast_Score=75, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010101 - InterPro: IPR010916 - InterPro: IPR010917 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 100068; Mature: 100068
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRANSTLAKAVRFALIGGATTAALSTSAVFAAEDGAKVERIAVTGSRIQRTNLETSTPIT CCCCHHHHHHHHHHHCCCCHHHHHCCCEEEEECCCCCEEEEEECCCCEEECCCCCCCCEE MFSAADIEKTGFSTVSEFLRTNAASGGFNESSTLSQAAGASSIGVKGFGSDYTLILLNGR EEEECCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCEECCCCEEEEEECCC RIAKNTAGGIFTDVNQVPMAAVERIDILNDGASAIYGSDAVAGVINIITKKEFDGVALSA EEECCCCCCEEECCCCCCHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHCCCCCCEEEEE KYGGATNKWDGNELSASIVTGTSNEKTSILFSAEHFARDVIQASDREFGRTALIEGHEGG ECCCCCCCCCCCCEEEEEEECCCCCCEEEEEEHHHHHHHHHHHCCCCCCCEEEEECCCCC DGRSTWGIPGFTSISSAKGFTNAATDEGSKPWSNCPAGDVLSSGRCAYDFAHLYQLQPES CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHCCCCCH ERQSIFTTINHEMNDDLTFNGQFRYTRAYTKTSNAPAPGQVDVSNSPFLADFLRNDRYKD HHHHHHHHHCCCCCCCEEECCEEEEEEEEEECCCCCCCCEEECCCCCHHHHHHHCCCCCC DQAKAEEIIRLVEAGEANVSVGRRYLDFGNREKDNTNETFEAVGGANYNIDDNWGLNFDI HHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCEEEC GFSRLTNRQIGSSGQLLSEEVANAFNDPKSKLNPFVINDCSSKDLSDTCRDLQVAIHRTG CHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHCCCEEEECCCCCCHHHHHHHHHHEEEECC EYTVSFSSLVLSGLLPGIELPGGEIGLATGLDMREEKYTDRSDPATVGGQVIGGAGSNGG CEEEEHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHCCCCCCCCCCCCEEEECCCCCCC GQFSNLAGFIELSLPVLDNLEVSLAARQDKADWELADASDTTYSAKLSYRPIDDLLLRAS CCHHHCEEEEEEECCCCCCCEEEEEECCCCCCCEEECCCCCEEEEEEECCCHHHHHEEEC YGTGFKAPNLSDLFLAESSGVTRAIDTKLCNAAGNVQNHPDCQRQELNSKSGGNPDLTPE CCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCC KSKSYNLGAVYQFTDNLSLSVDFWSLKIDDVVGSLAIQEILDEEAKGNLTNLVVRNSEGR CCCCCCCEEEEEEECCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC LTDSNRDGYVQTNKQNLTEQSATGLNYDLQYSSEFSFGTLKSSLQAEQFLSYKTQSSAVQ EECCCCCCEEEECHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHH PLCDDIADNSMRDYRINGSISLEQNDFVTSLNMRYLPGYEMYDKRNTGNKSCQLVGYYDV HHHHHHHCCCCCEEEECCEEEECCCCEEEEECEEECCCCHHHCCCCCCCCCEEEEEEEEC GKATDVDANGDLVNPGRSQHVAAYVQFDLTTAYYFADDNKVTLGVRNLLDRQPSFSAPNN CCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEEECCCEEEEEHHHHHCCCCCCCCCCC WPFYDQGVYDNIGRFVYLQYDVKF CCCCCCCCHHCCCCEEEEEEEECC >Mature Secondary Structure MRANSTLAKAVRFALIGGATTAALSTSAVFAAEDGAKVERIAVTGSRIQRTNLETSTPIT CCCCHHHHHHHHHHHCCCCHHHHHCCCEEEEECCCCCEEEEEECCCCEEECCCCCCCCEE MFSAADIEKTGFSTVSEFLRTNAASGGFNESSTLSQAAGASSIGVKGFGSDYTLILLNGR EEEECCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCEECCCCEEEEEECCC RIAKNTAGGIFTDVNQVPMAAVERIDILNDGASAIYGSDAVAGVINIITKKEFDGVALSA EEECCCCCCEEECCCCCCHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHCCCCCCEEEEE KYGGATNKWDGNELSASIVTGTSNEKTSILFSAEHFARDVIQASDREFGRTALIEGHEGG ECCCCCCCCCCCCEEEEEEECCCCCCEEEEEEHHHHHHHHHHHCCCCCCCEEEEECCCCC DGRSTWGIPGFTSISSAKGFTNAATDEGSKPWSNCPAGDVLSSGRCAYDFAHLYQLQPES CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHCCCCCH ERQSIFTTINHEMNDDLTFNGQFRYTRAYTKTSNAPAPGQVDVSNSPFLADFLRNDRYKD HHHHHHHHHCCCCCCCEEECCEEEEEEEEEECCCCCCCCEEECCCCCHHHHHHHCCCCCC DQAKAEEIIRLVEAGEANVSVGRRYLDFGNREKDNTNETFEAVGGANYNIDDNWGLNFDI HHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCEEEC GFSRLTNRQIGSSGQLLSEEVANAFNDPKSKLNPFVINDCSSKDLSDTCRDLQVAIHRTG CHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHCCCEEEECCCCCCHHHHHHHHHHEEEECC EYTVSFSSLVLSGLLPGIELPGGEIGLATGLDMREEKYTDRSDPATVGGQVIGGAGSNGG CEEEEHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHCCCCCCCCCCCCEEEECCCCCCC GQFSNLAGFIELSLPVLDNLEVSLAARQDKADWELADASDTTYSAKLSYRPIDDLLLRAS CCHHHCEEEEEEECCCCCCCEEEEEECCCCCCCEEECCCCCEEEEEEECCCHHHHHEEEC YGTGFKAPNLSDLFLAESSGVTRAIDTKLCNAAGNVQNHPDCQRQELNSKSGGNPDLTPE CCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCC KSKSYNLGAVYQFTDNLSLSVDFWSLKIDDVVGSLAIQEILDEEAKGNLTNLVVRNSEGR CCCCCCCEEEEEEECCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC LTDSNRDGYVQTNKQNLTEQSATGLNYDLQYSSEFSFGTLKSSLQAEQFLSYKTQSSAVQ EECCCCCCEEEECHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHH PLCDDIADNSMRDYRINGSISLEQNDFVTSLNMRYLPGYEMYDKRNTGNKSCQLVGYYDV HHHHHHHCCCCCEEEECCEEEECCCCEEEEECEEECCCCHHHCCCCCCCCCEEEEEEEEC GKATDVDANGDLVNPGRSQHVAAYVQFDLTTAYYFADDNKVTLGVRNLLDRQPSFSAPNN CCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEEECCCEEEEEHHHHHCCCCCCCCCCC WPFYDQGVYDNIGRFVYLQYDVKF CCCCCCCCHHCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11598060 [H]