| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875835
Identifier: 160875835
GI number: 160875835
Start: 3229552
End: 3230013
Strand: Direct
Name: 160875835
Synonym: Sbal195_2723
Alternate gene names: NA
Gene position: 3229552-3230013 (Clockwise)
Preceding gene: 160875832
Following gene: 160875836
Centisome position: 60.4
GC content: 45.02
Gene sequence:
>462_bases ATGAACTACTGGCTTATGAAATCGGAACCCGACGAATTTAGCATAGATGATCTTAAGGCTTGCCCGAACCAAATCGAAGC TTGGCATGGGATACGTAACTATCAGGCGCGTAACTTCATGCGCGATGAGATGCAGATTGGCGATCAGGTATTTTTTTACC ATTCAAGCTGCAAAGTACCCGGTATTGTCGGTATCGCTGAAGTCGTGACAAATGCGTATCCCGACAGCACAGCCTTCGAT CCCGAATCTAAGTATTTCGACCCTAAGTCAGATCCAACCAAACCGAGATGGCTACGAGTAGATATCCGCTTTGTTGAAAA ATTTAACGATATTATTCCCTTAAGCCTGATTAAAAACCTGCCGCAATTAGCCGACATGTATTTAGTGACTAAGGGTTCAA GGCTGAGTATCCAACCTGTGACCGCCGAACAATGGCAAGCTGTGCTAATGTTAACCCGTTGA
Upstream 100 bases:
>100_bases CAATGTTTGATATGAGTGACGAACTGGGGTGTTCGATAAAATTAAGATAAACTCAGGGATATTGAAGCGCTTAACGGCAA CTATGAATAAAGGAAACAAG
Downstream 100 bases:
>100_bases GTTTAAACATCTCGACTCAGTAACGTTCAGCTAAGGTTCATTTAGTATCGCCTATTGTTGGCCGCATCAAGCATTGCCGC TGCACTAGCTCAATGCTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MNYWLMKSEPDEFSIDDLKACPNQIEAWHGIRNYQARNFMRDEMQIGDQVFFYHSSCKVPGIVGIAEVVTNAYPDSTAFD PESKYFDPKSDPTKPRWLRVDIRFVEKFNDIIPLSLIKNLPQLADMYLVTKGSRLSIQPVTAEQWQAVLMLTR
Sequences:
>Translated_153_residues MNYWLMKSEPDEFSIDDLKACPNQIEAWHGIRNYQARNFMRDEMQIGDQVFFYHSSCKVPGIVGIAEVVTNAYPDSTAFD PESKYFDPKSDPTKPRWLRVDIRFVEKFNDIIPLSLIKNLPQLADMYLVTKGSRLSIQPVTAEQWQAVLMLTR >Mature_153_residues MNYWLMKSEPDEFSIDDLKACPNQIEAWHGIRNYQARNFMRDEMQIGDQVFFYHSSCKVPGIVGIAEVVTNAYPDSTAFD PESKYFDPKSDPTKPRWLRVDIRFVEKFNDIIPLSLIKNLPQLADMYLVTKGSRLSIQPVTAEQWQAVLMLTR
Specific function: Unknown
COG id: COG2947
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI83267861, Length=167, Percent_Identity=45.5089820359281, Blast_Score=150, Evalue=5e-37, Organism=Homo sapiens, GI40806221, Length=167, Percent_Identity=45.5089820359281, Blast_Score=150, Evalue=5e-37, Organism=Homo sapiens, GI7661804, Length=167, Percent_Identity=45.5089820359281, Blast_Score=150, Evalue=5e-37, Organism=Homo sapiens, GI83267859, Length=105, Percent_Identity=49.5238095238095, Blast_Score=118, Evalue=2e-27, Organism=Homo sapiens, GI40806219, Length=105, Percent_Identity=49.5238095238095, Blast_Score=118, Evalue=2e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17780; Mature: 17780
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYWLMKSEPDEFSIDDLKACPNQIEAWHGIRNYQARNFMRDEMQIGDQVFFYHSSCKVP CCEECCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCC GIVGIAEVVTNAYPDSTAFDPESKYFDPKSDPTKPRWLRVDIRFVEKFNDIIPLSLIKNL CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHCCCCCHHHHHCC PQLADMYLVTKGSRLSIQPVTAEQWQAVLMLTR HHHHHEEEEECCCEEEEECCCHHHCEEEEEECC >Mature Secondary Structure MNYWLMKSEPDEFSIDDLKACPNQIEAWHGIRNYQARNFMRDEMQIGDQVFFYHSSCKVP CCEECCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCC GIVGIAEVVTNAYPDSTAFDPESKYFDPKSDPTKPRWLRVDIRFVEKFNDIIPLSLIKNL CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHCCCCCHHHHHCC PQLADMYLVTKGSRLSIQPVTAEQWQAVLMLTR HHHHHEEEEECCCEEEEECCCHHHCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA