| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875831
Identifier: 160875831
GI number: 160875831
Start: 3225650
End: 3226396
Strand: Reverse
Name: 160875831
Synonym: Sbal195_2719
Alternate gene names: NA
Gene position: 3226396-3225650 (Counterclockwise)
Preceding gene: 160875833
Following gene: 160875830
Centisome position: 60.34
GC content: 47.93
Gene sequence:
>747_bases ATGGTTCGATGGCGTTCAATGCTCCTTGCGTGTTGCCTTTCCTCCATGGGATTGAGCACAGCGAAAGCGGATACCTTAAT GCTGACATCCTTACTTTGGCCGCCTTATTCTGGGCAGCAATTAGCCGAGCAGGGCGCGAGTATTGCTGTGGCGCGGGCGG CGCTCAAAGTGATGGGGCACCAATTAGAAGTGGATTTTTACCCATGGAGCCGCGCTGTAAAGCTCGCCAGTATGCCTAAT TCTGACTATCTGGGTTATTTCCCTGAGTATTACTTTGAGACTGAAAAGTTTGTTTTTTCTAAATCGATTGGCGACGGTCC TTTGGGACTGGTGGAGCAAAAAGCCCATCCTGTGAGTTGGAATTATGTCGAAGATCTGAATCGCTATACCTTAGGTGTGG TGAAAGATTACGTGAATACTCAGGCGTTAGATCGCATGATTGCCACAGGCGTTCAGCCGACTGAAGCGGTGACTTCAGAT GAGCACAATATTAAGAAAGTGGCCGCAGGCCGTATTGATGCGGCGGTAATCGATGTCAACGTGCTGCACTATTTACTTAA GCAAAAGCCCTTGCAGCCATTGGCGGACAAACTGCAAATCAACCGCCAAATTTTAGCGAATAAGCAGCTTTATATTGCGT TTCGTAATACCGAAGAAGGCCGACGTTGGCGGGATATTTTTGATCAAGGCTTGGCGCAAATTGATGTCGAAACCATCATC GGAGAGCTACTGTATCGTGAAGACTAA
Upstream 100 bases:
>100_bases CTATACTAAAACCAGAGAAAAAATCTTGGCAGATAAAAACTAAAGCTCAATTTGTCGATGATTTAGTAGTCAATCCATTC TGCAGGCTAAGGAGTCCCAA
Downstream 100 bases:
>100_bases TGCATAATTTAGGTTAGTGTGCTCTCAATTTTCCCCCTTATTTTTTCCTCTATTTTCAGCCAATTCCTCTCAAAATTACA TCAGATATTCCGCTTGTCAT
Product: ABC transporter
Products: NA
Alternate protein names: Amino Acid ABC Transporter Periplasmic Protein; Succinate Dehydrogenase; ABC-Type Amino Acid Transport Periplasmic Protein; ABC-Type Transporter Periplasmic Component
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MVRWRSMLLACCLSSMGLSTAKADTLMLTSLLWPPYSGQQLAEQGASIAVARAALKVMGHQLEVDFYPWSRAVKLASMPN SDYLGYFPEYYFETEKFVFSKSIGDGPLGLVEQKAHPVSWNYVEDLNRYTLGVVKDYVNTQALDRMIATGVQPTEAVTSD EHNIKKVAAGRIDAAVIDVNVLHYLLKQKPLQPLADKLQINRQILANKQLYIAFRNTEEGRRWRDIFDQGLAQIDVETII GELLYRED
Sequences:
>Translated_248_residues MVRWRSMLLACCLSSMGLSTAKADTLMLTSLLWPPYSGQQLAEQGASIAVARAALKVMGHQLEVDFYPWSRAVKLASMPN SDYLGYFPEYYFETEKFVFSKSIGDGPLGLVEQKAHPVSWNYVEDLNRYTLGVVKDYVNTQALDRMIATGVQPTEAVTSD EHNIKKVAAGRIDAAVIDVNVLHYLLKQKPLQPLADKLQINRQILANKQLYIAFRNTEEGRRWRDIFDQGLAQIDVETII GELLYRED >Mature_248_residues MVRWRSMLLACCLSSMGLSTAKADTLMLTSLLWPPYSGQQLAEQGASIAVARAALKVMGHQLEVDFYPWSRAVKLASMPN SDYLGYFPEYYFETEKFVFSKSIGDGPLGLVEQKAHPVSWNYVEDLNRYTLGVVKDYVNTQALDRMIATGVQPTEAVTSD EHNIKKVAAGRIDAAVIDVNVLHYLLKQKPLQPLADKLQINRQILANKQLYIAFRNTEEGRRWRDIFDQGLAQIDVETII GELLYRED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28035; Mature: 28035
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRWRSMLLACCLSSMGLSTAKADTLMLTSLLWPPYSGQQLAEQGASIAVARAALKVMGH CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHCC QLEVDFYPWSRAVKLASMPNSDYLGYFPEYYFETEKFVFSKSIGDGPLGLVEQKAHPVSW CEEEEEECHHHHEEECCCCCCCCCCCCHHHHHHHHHHHEECCCCCCCCCHHHCCCCCCCC NYVEDLNRYTLGVVKDYVNTQALDRMIATGVQPTEAVTSDEHNIKKVAAGRIDAAVIDVN HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHCCCCHHHHHHH VLHYLLKQKPLQPLADKLQINRQILANKQLYIAFRNTEEGRRWRDIFDQGLAQIDVETII HHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH GELLYRED HHHHHCCC >Mature Secondary Structure MVRWRSMLLACCLSSMGLSTAKADTLMLTSLLWPPYSGQQLAEQGASIAVARAALKVMGH CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHCC QLEVDFYPWSRAVKLASMPNSDYLGYFPEYYFETEKFVFSKSIGDGPLGLVEQKAHPVSW CEEEEEECHHHHEEECCCCCCCCCCCCHHHHHHHHHHHEECCCCCCCCCHHHCCCCCCCC NYVEDLNRYTLGVVKDYVNTQALDRMIATGVQPTEAVTSDEHNIKKVAAGRIDAAVIDVN HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHCCCCHHHHHHH VLHYLLKQKPLQPLADKLQINRQILANKQLYIAFRNTEEGRRWRDIFDQGLAQIDVETII HHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH GELLYRED HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA