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The map label for this gene is ycbZ [C]

Identifier: 160875791

GI number: 160875791

Start: 3181700

End: 3183433

Strand: Direct

Name: ycbZ [C]

Synonym: Sbal195_2679

Alternate gene names: 160875791

Gene position: 3181700-3183433 (Clockwise)

Preceding gene: 160875786

Following gene: 160875792

Centisome position: 59.5

GC content: 46.19

Gene sequence:

>1734_bases
ATGAATTCACTCTTGATACCCACGTCTTCACTCGCACCTGAATTTAGCCTGCCAACCCTTTCCGAAACGGCTGCCAATCT
AAGCGCATTGCTCTTAGGGCAAGAGCGCACTGTGGACGCGTTTAAACTCCACCAAGCTATTGTCGATCAACACTTGTATC
TGGCCGATTTCCCGAGCATTGACCGCCAGTTAATGATCCAAGCCTGTATCGATAGCCTTGCACCTTTTTCCCCTGCGTAT
TTAGTGGCGACACGTCCGATTGATAAGGCGGTAACATTTCAGTGGCAGTCCGATAAGCCGCAGGAAAATCAAGGAAGTAT
TGCTGAGAAAACAACTCACTATCGCTACCTCAGTGGCAATATTCGCCGCGCAGATTTAATTGGCCGTATGGCGCAAACAG
GGACAACGAGTCAGTATCAAGCTGGTGCCCTAGCCCAATGCCATTATGTGTTTATTTGCGCCGAGTCACTGTGGAAACGT
GAAGGTTTATGGGAGTTAGTGATGCAAATCCTCACCCATAAAGAGTATCAAATTAGCAATAACTTAAGTCCTATTCCATT
GAACTGTAAGATAGTCCTGGTTGGTGCTGGGATGATTTATAGCCAAGTCAGAACTGAGGATTGGCAATTTCAACGTCACT
TTACCCTATTAGCGGAACTTGCCAGCGAAATCGACTTGGTCCGTTATAAAGAGTCACAATACGTCGCATGGCTGCAAGCT
GTTGCCCAAAGTGTGGATGTCACGCTTGAACAATCCAGTTTAGCGCCACTCTTTCGCTATAGTGCACGGTTAACCGAACA
TCAGCGTCGCCTCAGTTTATCTATGCTCGAGTTCGCCCAGCTCATGATGCAAGCTAAAGCCTATCGTGGTAAACCGAGCA
TCAATGCAAGCAGTATTGAGCACGCGTTAACCCAAGCCAACTATCGTCATAACAGTTCGGAAGAATATTCGGGCCAAAGC
TTCGATGACAATTTCATAAATCTGCCAACTTCGGGTGCTATGGTTGGCCAGATCAATGGCTTAACTGTGATTGATGCTAT
CGATTATAGCTATGGTGAACCAGCGCGTATCACGGCATCTGTTCACTACGGTGATGGTGAAGTAGCCGATATTGAAAGAA
AATCTGAACTTGGCGGGAATATACATGCCAAAGGCATGATGATCCTTTCAGCCTGCTTGTACCGTATCTTTGGACGAGAT
GCGCCATTACACCTGAATGCCAATATCGTTTTCGAACAGTCCTATCAAGAAATTGATGGCGATAGTGCATCACTAGCAGA
GTACTGCTGTTTGATGTCAGCGATTGCCGAACAACCCATTATTCAATCACTGGCGATTACCGGCGCATTGGATCAATTTG
GTAATGTGCAAGCGATTGGCGGCATCAACGAGAAGATTGAAGGCTTTTTTAATCTGTGTGAACGCCGCGGACTTACGGGA
GAACAAGGCGTTATTATGCCGAAGTCAAACGTATTACAACTTAATCTCAATCCCAAAGTGATTACAGCTGTAGGCAAAGG
CCTGTTTCACATCTATGCCATTGAACATATGGACCAAGCGGTTGAGCTATTAATGCAAATGCCAGCGGGTGTTGCCGATG
AAGATAATGATTTCCCGCATGATTCATTATATGGTCTCGTGCAGGAACGATTAGACAAGCTCGCGGGAAATGGGGAGGAG
GAAATCGGCCTAATCACGAGATTACTCGCAAAATTGGGATTTTTTCGCCGCTAA

Upstream 100 bases:

>100_bases
ACGAATAATCGGGCAAACAGACGTAAAAACACCTATACAGTGAGAGACTTGTCGTCTTGGTATGGTAAAATCACTGTAAC
TTTTCACGGTAAATGCTTAT

Downstream 100 bases:

>100_bases
TTAGCTGATCGGAGTTGTTTAGCTTACACGTGTTCGCTAACCTTGGCGGCTCTTATTGCTGGAGTAGTAAAACAATGAAT
AAAGCAAACAGTTTCAATAA

Product: ATP-dependent protease

Products: NA

Alternate protein names: ATP-dependent protease La homolog [H]

Number of amino acids: Translated: 577; Mature: 577

Protein sequence:

>577_residues
MNSLLIPTSSLAPEFSLPTLSETAANLSALLLGQERTVDAFKLHQAIVDQHLYLADFPSIDRQLMIQACIDSLAPFSPAY
LVATRPIDKAVTFQWQSDKPQENQGSIAEKTTHYRYLSGNIRRADLIGRMAQTGTTSQYQAGALAQCHYVFICAESLWKR
EGLWELVMQILTHKEYQISNNLSPIPLNCKIVLVGAGMIYSQVRTEDWQFQRHFTLLAELASEIDLVRYKESQYVAWLQA
VAQSVDVTLEQSSLAPLFRYSARLTEHQRRLSLSMLEFAQLMMQAKAYRGKPSINASSIEHALTQANYRHNSSEEYSGQS
FDDNFINLPTSGAMVGQINGLTVIDAIDYSYGEPARITASVHYGDGEVADIERKSELGGNIHAKGMMILSACLYRIFGRD
APLHLNANIVFEQSYQEIDGDSASLAEYCCLMSAIAEQPIIQSLAITGALDQFGNVQAIGGINEKIEGFFNLCERRGLTG
EQGVIMPKSNVLQLNLNPKVITAVGKGLFHIYAIEHMDQAVELLMQMPAGVADEDNDFPHDSLYGLVQERLDKLAGNGEE
EIGLITRLLAKLGFFRR

Sequences:

>Translated_577_residues
MNSLLIPTSSLAPEFSLPTLSETAANLSALLLGQERTVDAFKLHQAIVDQHLYLADFPSIDRQLMIQACIDSLAPFSPAY
LVATRPIDKAVTFQWQSDKPQENQGSIAEKTTHYRYLSGNIRRADLIGRMAQTGTTSQYQAGALAQCHYVFICAESLWKR
EGLWELVMQILTHKEYQISNNLSPIPLNCKIVLVGAGMIYSQVRTEDWQFQRHFTLLAELASEIDLVRYKESQYVAWLQA
VAQSVDVTLEQSSLAPLFRYSARLTEHQRRLSLSMLEFAQLMMQAKAYRGKPSINASSIEHALTQANYRHNSSEEYSGQS
FDDNFINLPTSGAMVGQINGLTVIDAIDYSYGEPARITASVHYGDGEVADIERKSELGGNIHAKGMMILSACLYRIFGRD
APLHLNANIVFEQSYQEIDGDSASLAEYCCLMSAIAEQPIIQSLAITGALDQFGNVQAIGGINEKIEGFFNLCERRGLTG
EQGVIMPKSNVLQLNLNPKVITAVGKGLFHIYAIEHMDQAVELLMQMPAGVADEDNDFPHDSLYGLVQERLDKLAGNGEE
EIGLITRLLAKLGFFRR
>Mature_577_residues
MNSLLIPTSSLAPEFSLPTLSETAANLSALLLGQERTVDAFKLHQAIVDQHLYLADFPSIDRQLMIQACIDSLAPFSPAY
LVATRPIDKAVTFQWQSDKPQENQGSIAEKTTHYRYLSGNIRRADLIGRMAQTGTTSQYQAGALAQCHYVFICAESLWKR
EGLWELVMQILTHKEYQISNNLSPIPLNCKIVLVGAGMIYSQVRTEDWQFQRHFTLLAELASEIDLVRYKESQYVAWLQA
VAQSVDVTLEQSSLAPLFRYSARLTEHQRRLSLSMLEFAQLMMQAKAYRGKPSINASSIEHALTQANYRHNSSEEYSGQS
FDDNFINLPTSGAMVGQINGLTVIDAIDYSYGEPARITASVHYGDGEVADIERKSELGGNIHAKGMMILSACLYRIFGRD
APLHLNANIVFEQSYQEIDGDSASLAEYCCLMSAIAEQPIIQSLAITGALDQFGNVQAIGGINEKIEGFFNLCERRGLTG
EQGVIMPKSNVLQLNLNPKVITAVGKGLFHIYAIEHMDQAVELLMQMPAGVADEDNDFPHDSLYGLVQERLDKLAGNGEE
EIGLITRLLAKLGFFRR

Specific function: Unknown

COG id: COG1067

COG function: function code O; Predicted ATP-dependent protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S16 family [H]

Homologues:

Organism=Escherichia coli, GI1787188, Length=371, Percent_Identity=36.9272237196765, Blast_Score=234, Evalue=2e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008269
- InterPro:   IPR008268
- InterPro:   IPR001984
- InterPro:   IPR020568 [H]

Pfam domain/function: PF05362 Lon_C [H]

EC number: 3.4.21.- [C]

Molecular weight: Translated: 64132; Mature: 64132

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSLLIPTSSLAPEFSLPTLSETAANLSALLLGQERTVDAFKLHQAIVDQHLYLADFPSI
CCCEECCCCCCCCCCCCCCHHHHHHHHHHEEECCCCCHHHHHHHHHHHHCCCEEECCCCH
DRQLMIQACIDSLAPFSPAYLVATRPIDKAVTFQWQSDKPQENQGSIAEKTTHYRYLSGN
HHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCHHHHHHCEEEECCC
IRRADLIGRMAQTGTTSQYQAGALAQCHYVFICAESLWKREGLWELVMQILTHKEYQISN
CCHHHHHHHHHHCCCCCCCCCCCHHHHHEEEEEHHHHHHHCCHHHHHHHHHCCCCEECCC
NLSPIPLNCKIVLVGAGMIYSQVRTEDWQFQRHFTLLAELASEIDLVRYKESQYVAWLQA
CCCCCCCCEEEEEEECCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
VAQSVDVTLEQSSLAPLFRYSARLTEHQRRLSLSMLEFAQLMMQAKAYRGKPSINASSIE
HHHHHCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
HALTQANYRHNSSEEYSGQSFDDNFINLPTSGAMVGQINGLTVIDAIDYSYGEPARITAS
HHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCEEEECCCEEEEEECCCCCCCCCEEEEE
VHYGDGEVADIERKSELGGNIHAKGMMILSACLYRIFGRDAPLHLNANIVFEQSYQEIDG
EECCCCCEECCHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCCEEECCEEEEECCHHHCCC
DSASLAEYCCLMSAIAEQPIIQSLAITGALDQFGNVQAIGGINEKIEGFFNLCERRGLTG
CHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCCC
EQGVIMPKSNVLQLNLNPKVITAVGKGLFHIYAIEHMDQAVELLMQMPAGVADEDNDFPH
CCCEEECCCCEEEEECCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
DSLYGLVQERLDKLAGNGEEEIGLITRLLAKLGFFRR
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNSLLIPTSSLAPEFSLPTLSETAANLSALLLGQERTVDAFKLHQAIVDQHLYLADFPSI
CCCEECCCCCCCCCCCCCCHHHHHHHHHHEEECCCCCHHHHHHHHHHHHCCCEEECCCCH
DRQLMIQACIDSLAPFSPAYLVATRPIDKAVTFQWQSDKPQENQGSIAEKTTHYRYLSGN
HHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCHHHHHHCEEEECCC
IRRADLIGRMAQTGTTSQYQAGALAQCHYVFICAESLWKREGLWELVMQILTHKEYQISN
CCHHHHHHHHHHCCCCCCCCCCCHHHHHEEEEEHHHHHHHCCHHHHHHHHHCCCCEECCC
NLSPIPLNCKIVLVGAGMIYSQVRTEDWQFQRHFTLLAELASEIDLVRYKESQYVAWLQA
CCCCCCCCEEEEEEECCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
VAQSVDVTLEQSSLAPLFRYSARLTEHQRRLSLSMLEFAQLMMQAKAYRGKPSINASSIE
HHHHHCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
HALTQANYRHNSSEEYSGQSFDDNFINLPTSGAMVGQINGLTVIDAIDYSYGEPARITAS
HHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCEEEECCCEEEEEECCCCCCCCCEEEEE
VHYGDGEVADIERKSELGGNIHAKGMMILSACLYRIFGRDAPLHLNANIVFEQSYQEIDG
EECCCCCEECCHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCCEEECCEEEEECCHHHCCC
DSASLAEYCCLMSAIAEQPIIQSLAITGALDQFGNVQAIGGINEKIEGFFNLCERRGLTG
CHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCCC
EQGVIMPKSNVLQLNLNPKVITAVGKGLFHIYAIEHMDQAVELLMQMPAGVADEDNDFPH
CCCEEECCCCEEEEECCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
DSLYGLVQERLDKLAGNGEEEIGLITRLLAKLGFFRR
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]