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The map label for this gene is yggA [H]

Identifier: 160875782

GI number: 160875782

Start: 3167333

End: 3167950

Strand: Reverse

Name: yggA [H]

Synonym: Sbal195_2670

Alternate gene names: 160875782

Gene position: 3167950-3167333 (Counterclockwise)

Preceding gene: 160875784

Following gene: 160875779

Centisome position: 59.24

GC content: 50.49

Gene sequence:

>618_bases
ATGCAAGCGGCATTTATACAAGGTATGGGAATTGGTGGCAGTTTGATTATTGCTGTAGGCGCGCAAAATGCCTTTGTGCT
CAAGCAAGGCATTAAGCGCTCGTACACGTTACCGATTGCGTTGCTCTGCTCTATGATTGATGCGCTGATGATCACTGCGG
GTGTGGCGGGGCTGGGGCACATTATTGAATCTTTCCCGACCATTAAGCATGTGGCGAGTTTCGGTGGCGCGGCGTTTCTG
CTTTGGTACGGTGCAAATGCGCTCAAGGCGTCGTTTGTGGCCAAGGGCATTGAGATGGAGCAGGCTGATAATGCCGATAC
CTTCAAAAAGGCCGTGTTGACTACGCTTGGGATCAGTCTGCTTAATCCGCATTTGTACCTCGACACTGTGGTGTTGCTCG
GCAGTATCAGCACTCAATTTGATGATTTACATCGACCTTGGTTTGGCGCCGGTGCCGTATTGGCATCGTTTATTTGGTTC
TTCGGCTTAAGTTTTGGTGCGCGTTTGCTGGCGCCCATTTTTACTCGCCCAGCAGCATGGCGTTATCTTGACCGTTTTAT
ATGGCTAACCATGTGGAGTATTGCCGCCGCGATTATTTGGCCCTATGTGGCAGGATAA

Upstream 100 bases:

>100_bases
GATGATTATTAATTTTACTTATGATACATAAAAAACATTAGTTATATTAATTTTGTTGTTTTGACTATGCTAGCGCCTTC
TTCGAACATGAGAGGTGGTT

Downstream 100 bases:

>100_bases
ACCGACGCTGAGATGCCATGAAATGTGGACATGGCTGAATGGTTTTGCGGATTTTTTGCTCGGTTAGACAGTATGTTGTG
ATATGAAAGTGAAAATTTTT

Product: lysine exporter protein LysE/YggA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MQAAFIQGMGIGGSLIIAVGAQNAFVLKQGIKRSYTLPIALLCSMIDALMITAGVAGLGHIIESFPTIKHVASFGGAAFL
LWYGANALKASFVAKGIEMEQADNADTFKKAVLTTLGISLLNPHLYLDTVVLLGSISTQFDDLHRPWFGAGAVLASFIWF
FGLSFGARLLAPIFTRPAAWRYLDRFIWLTMWSIAAAIIWPYVAG

Sequences:

>Translated_205_residues
MQAAFIQGMGIGGSLIIAVGAQNAFVLKQGIKRSYTLPIALLCSMIDALMITAGVAGLGHIIESFPTIKHVASFGGAAFL
LWYGANALKASFVAKGIEMEQADNADTFKKAVLTTLGISLLNPHLYLDTVVLLGSISTQFDDLHRPWFGAGAVLASFIWF
FGLSFGARLLAPIFTRPAAWRYLDRFIWLTMWSIAAAIIWPYVAG
>Mature_205_residues
MQAAFIQGMGIGGSLIIAVGAQNAFVLKQGIKRSYTLPIALLCSMIDALMITAGVAGLGHIIESFPTIKHVASFGGAAFL
LWYGANALKASFVAKGIEMEQADNADTFKKAVLTTLGISLLNPHLYLDTVVLLGSISTQFDDLHRPWFGAGAVLASFIWF
FGLSFGARLLAPIFTRPAAWRYLDRFIWLTMWSIAAAIIWPYVAG

Specific function: Unknown

COG id: COG1279

COG function: function code R; Lysine efflux permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LysE/ArgO transporter (TC 2.A.75) family [H]

Homologues:

Organism=Escherichia coli, GI1789290, Length=196, Percent_Identity=40.3061224489796, Blast_Score=139, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004777
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 22129; Mature: 22129

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAAFIQGMGIGGSLIIAVGAQNAFVLKQGIKRSYTLPIALLCSMIDALMITAGVAGLGH
CCCCCEECCCCCCEEEEEECCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IIESFPTIKHVASFGGAAFLLWYGANALKASFVAKGIEMEQADNADTFKKAVLTTLGISL
HHHHCHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHH
LNPHLYLDTVVLLGSISTQFDDLHRPWFGAGAVLASFIWFFGLSFGARLLAPIFTRPAAW
HCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
RYLDRFIWLTMWSIAAAIIWPYVAG
HHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQAAFIQGMGIGGSLIIAVGAQNAFVLKQGIKRSYTLPIALLCSMIDALMITAGVAGLGH
CCCCCEECCCCCCEEEEEECCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IIESFPTIKHVASFGGAAFLLWYGANALKASFVAKGIEMEQADNADTFKKAVLTTLGISL
HHHHCHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHH
LNPHLYLDTVVLLGSISTQFDDLHRPWFGAGAVLASFIWFFGLSFGARLLAPIFTRPAAW
HCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
RYLDRFIWLTMWSIAAAIIWPYVAG
HHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9286976 [H]