| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875766
Identifier: 160875766
GI number: 160875766
Start: 3145130
End: 3145726
Strand: Reverse
Name: 160875766
Synonym: Sbal195_2654
Alternate gene names: NA
Gene position: 3145726-3145130 (Counterclockwise)
Preceding gene: 160875768
Following gene: 160875764
Centisome position: 58.83
GC content: 44.72
Gene sequence:
>597_bases ATGCGCGCGTTTGTTTTACGAGCAAGATCAGCACCTACTGACAGTCAGTTGTTTTTGGCTTCTGTCGGCCAAGAGGCGCA CACCGAGATTTTGGCTCATACCCTAATGAACACTATCTTTGTGGCTCAGTCCCATCGAAACGATGTTGTCGTTTATCTAG TGTTAGAAAGTACCCATGATTTTTCCCGCACTATTTGCTTTGATACCCGAAATATTTGCCATATTGGCGGTTTTCACGAA CAAGCTTTGCTGACGAAAATTGCCAAGGCCTTAGATATTTCTCGGGGCATGACGAAAGAGCAAACTCGCGTTGTGGATGA GGGCATAACTGTGAGCACCATCAGTTTTGAAAAGCTGGTGCAGGACCTCGCGGTGGATTATCAATTGTTTATGATGGATA AGAAGGGCACGTCTATCCGTGAGCAGGAGTTTGTGGGTAATCCGTGTTTTTTGCTGACCGATCATATTCCTATGCCGAAG AAAAGTTTTAATACCTTGAAACGACTTGGTGCGCAAAAGATCAGCCTTGGGCCAAAGATGTTGTTTGCTTCCCAGTGCGT GGTATTGATCCATAATGAATTGGATATCAATCAGTAG
Upstream 100 bases:
>100_bases CAGTTAAGACAAAAATTCTTAACGTGAAATGACACGTTTCACATCGATATTTGCATTCGCCATTTAGCATTTAAGACATT ATTGAGTAGGACATTTACCT
Downstream 100 bases:
>100_bases CCACTGATCCTTAAGCCTCGCCGCTAACGATTCTCGTGTTGCAGCTCGTATAAAGCCCCATTTTAAAATGGGGCTTTTTT GTTTTTTAGCTACAGGTAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MRAFVLRARSAPTDSQLFLASVGQEAHTEILAHTLMNTIFVAQSHRNDVVVYLVLESTHDFSRTICFDTRNICHIGGFHE QALLTKIAKALDISRGMTKEQTRVVDEGITVSTISFEKLVQDLAVDYQLFMMDKKGTSIREQEFVGNPCFLLTDHIPMPK KSFNTLKRLGAQKISLGPKMLFASQCVVLIHNELDINQ
Sequences:
>Translated_198_residues MRAFVLRARSAPTDSQLFLASVGQEAHTEILAHTLMNTIFVAQSHRNDVVVYLVLESTHDFSRTICFDTRNICHIGGFHE QALLTKIAKALDISRGMTKEQTRVVDEGITVSTISFEKLVQDLAVDYQLFMMDKKGTSIREQEFVGNPCFLLTDHIPMPK KSFNTLKRLGAQKISLGPKMLFASQCVVLIHNELDINQ >Mature_198_residues MRAFVLRARSAPTDSQLFLASVGQEAHTEILAHTLMNTIFVAQSHRNDVVVYLVLESTHDFSRTICFDTRNICHIGGFHE QALLTKIAKALDISRGMTKEQTRVVDEGITVSTISFEKLVQDLAVDYQLFMMDKKGTSIREQEFVGNPCFLLTDHIPMPK KSFNTLKRLGAQKISLGPKMLFASQCVVLIHNELDINQ
Specific function: Unknown
COG id: COG1901
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0217 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1812_SHEB2 (B8E744)
Other databases:
- EMBL: CP001252 - RefSeq: YP_002357740.1 - ProteinModelPortal: B8E744 - SMR: B8E744 - GeneID: 7086486 - GenomeReviews: CP001252_GR - KEGG: sbp:Sbal223_1812 - HOGENOM: HBG625387 - OMA: NEAHTEI - ProtClustDB: PRK02135 - HAMAP: MF_00587 - InterPro: IPR007158
Pfam domain/function: PF04013 DUF358
EC number: NA
Molecular weight: Translated: 22295; Mature: 22295
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAFVLRARSAPTDSQLFLASVGQEAHTEILAHTLMNTIFVAQSHRNDVVVYLVLESTHD CCEEEEECCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHEECCCCCEEEEEEEECCCC FSRTICFDTRNICHIGGFHEQALLTKIAKALDISRGMTKEQTRVVDEGITVSTISFEKLV CHHEEEECCCCEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEECHHHHH QDLAVDYQLFMMDKKGTSIREQEFVGNPCFLLTDHIPMPKKSFNTLKRLGAQKISLGPKM HHHHCCEEEEEEECCCCCCHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCHHCCCCHHH LFASQCVVLIHNELDINQ HHHCCEEEEEECCCCCCC >Mature Secondary Structure MRAFVLRARSAPTDSQLFLASVGQEAHTEILAHTLMNTIFVAQSHRNDVVVYLVLESTHD CCEEEEECCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHEECCCCCEEEEEEEECCCC FSRTICFDTRNICHIGGFHEQALLTKIAKALDISRGMTKEQTRVVDEGITVSTISFEKLV CHHEEEECCCCEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEECHHHHH QDLAVDYQLFMMDKKGTSIREQEFVGNPCFLLTDHIPMPKKSFNTLKRLGAQKISLGPKM HHHHCCEEEEEEECCCCCCHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCHHCCCCHHH LFASQCVVLIHNELDINQ HHHCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA