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The map label for this gene is ndpA [C]

Identifier: 160875761

GI number: 160875761

Start: 3139344

End: 3140372

Strand: Reverse

Name: ndpA [C]

Synonym: Sbal195_2649

Alternate gene names: 160875761

Gene position: 3140372-3139344 (Counterclockwise)

Preceding gene: 160875764

Following gene: 160875759

Centisome position: 58.73

GC content: 47.52

Gene sequence:

>1029_bases
ATGAGTATTAACATCGAACACGCAATTATTCACGAGATTTCTCAGGACAGTCAGGGGCAATTACGCTGCCGTTTGCGTCC
TCAACCTCTGCTGAACGGTCAGGCGGTCGAGGTGATGCTTGACGAGTTACACCAGACTTATACGGGAAAGGCCGGTAAAG
GTTTTGGCTATTTTGGTATTCACGGCGACGACGGTGAGGCCAATCCTGCTTTTGCCAATGCGTTAACTCAATACCGCGGC
GGCGATTTAGGGTTTGTGGAATTTTCAGGCCAAGCCAGTAAATTACTACAAGAAGAATTGTCGAAATACGATTTCAGCCA
AGGCGGTTTTTTGCTGATGTCTTGCTACACCAGCATCACCAGCGATTATCTGTTTGTCGCCTTATTAAGTGCTAAGTCAT
CGATGACTGTGCTAGACGATATGGAACTGTCGCAAAATAATCATTTGGATTTAAACAATATCCAACTGGCGGCACGTATC
GATTTAACCGAGTGGCAAGCCGATAAAGACTCGCGTAAATACATTTCCTTTATCCGCGGCCGTGCGGGACGCAAAGTTGC
CGACTTTTTCCTCGACTTTATGGGCTGCGTCGAAGGCGTTAACACTAAGGCGCAAAACAAAACCTTAATGAATGCGGTTG
AAGATTTTGTTGCCAGCAGTGAGCTGACTAAAGACGAGCGTCAGCAGTGCCGTAATAAAGTGTTTGAATATTGCAGTGAG
CGCTTCGATGAAGGCGCTGACATCGAGATCAAAGACTTGGCCGATGAGTTAGCCGATCAAGGTATGGATTCTTTCTACGA
TTTTGCCCGTGGCGGCAGTTATGATCTCGACGAAGAGTTTCCGGCCGATAAATCGACCCTGCGCCAATTGAAGAAGTTTT
CAGGTACCGGTGGCGGCGTTACCCTGAGCTTTGATGGCGGCCACTTAGGGCAACGGGTGATTTACGATCCCATCTCGGAT
ACGATTTTAATCAAAGGTGTGCCCGCAAACTTAAAAGATCAGCTCGACCGTCGTCTTAAAGGCGAATAA

Upstream 100 bases:

>100_bases
GAGTATTTCGATTGGATTGCCATAATCAAAAAATGTTTCACTTTGGAATGGATTAGCGGCATATAATAGCGGATTTATCC
CAGTATCACTATCAGGGCTT

Downstream 100 bases:

>100_bases
CCCGCGATAAACCTGTTGGTTTAATCAAGGTAACGAACGTGAAAAGGCCGAGAGTGTTTACTCTCGGCCTTTTTGTTGGG
TCTGTTCCGTCCTAAATAGC

Product: nucleoid-associated protein NdpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MSINIEHAIIHEISQDSQGQLRCRLRPQPLLNGQAVEVMLDELHQTYTGKAGKGFGYFGIHGDDGEANPAFANALTQYRG
GDLGFVEFSGQASKLLQEELSKYDFSQGGFLLMSCYTSITSDYLFVALLSAKSSMTVLDDMELSQNNHLDLNNIQLAARI
DLTEWQADKDSRKYISFIRGRAGRKVADFFLDFMGCVEGVNTKAQNKTLMNAVEDFVASSELTKDERQQCRNKVFEYCSE
RFDEGADIEIKDLADELADQGMDSFYDFARGGSYDLDEEFPADKSTLRQLKKFSGTGGGVTLSFDGGHLGQRVIYDPISD
TILIKGVPANLKDQLDRRLKGE

Sequences:

>Translated_342_residues
MSINIEHAIIHEISQDSQGQLRCRLRPQPLLNGQAVEVMLDELHQTYTGKAGKGFGYFGIHGDDGEANPAFANALTQYRG
GDLGFVEFSGQASKLLQEELSKYDFSQGGFLLMSCYTSITSDYLFVALLSAKSSMTVLDDMELSQNNHLDLNNIQLAARI
DLTEWQADKDSRKYISFIRGRAGRKVADFFLDFMGCVEGVNTKAQNKTLMNAVEDFVASSELTKDERQQCRNKVFEYCSE
RFDEGADIEIKDLADELADQGMDSFYDFARGGSYDLDEEFPADKSTLRQLKKFSGTGGGVTLSFDGGHLGQRVIYDPISD
TILIKGVPANLKDQLDRRLKGE
>Mature_341_residues
SINIEHAIIHEISQDSQGQLRCRLRPQPLLNGQAVEVMLDELHQTYTGKAGKGFGYFGIHGDDGEANPAFANALTQYRGG
DLGFVEFSGQASKLLQEELSKYDFSQGGFLLMSCYTSITSDYLFVALLSAKSSMTVLDDMELSQNNHLDLNNIQLAARID
LTEWQADKDSRKYISFIRGRAGRKVADFFLDFMGCVEGVNTKAQNKTLMNAVEDFVASSELTKDERQQCRNKVFEYCSER
FDEGADIEIKDLADELADQGMDSFYDFARGGSYDLDEEFPADKSTLRQLKKFSGTGGGVTLSFDGGHLGQRVIYDPISDT
ILIKGVPANLKDQLDRRLKGE

Specific function: Unknown

COG id: COG3081

COG function: function code R; Nucleoid-associated protein

Gene ontology:

Cell location: Cytoplasm, nucleoid

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YejK family

Homologues:

Organism=Escherichia coli, GI1788513, Length=341, Percent_Identity=43.9882697947214, Blast_Score=304, Evalue=4e-84,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NDPA_SHEB2 (B8E749)

Other databases:

- EMBL:   CP001252
- RefSeq:   YP_002357745.1
- GeneID:   7086491
- GenomeReviews:   CP001252_GR
- KEGG:   sbp:Sbal223_1817
- HOGENOM:   HBG296787
- OMA:   TDYLFIA
- ProtClustDB:   PRK00378
- GO:   GO:0005737
- GO:   GO:0009295
- HAMAP:   MF_00730
- InterPro:   IPR007358

Pfam domain/function: PF04245 NA37

EC number: NA

Molecular weight: Translated: 38083; Mature: 37952

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSINIEHAIIHEISQDSQGQLRCRLRPQPLLNGQAVEVMLDELHQTYTGKAGKGFGYFGI
CCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEE
HGDDGEANPAFANALTQYRGGDLGFVEFSGQASKLLQEELSKYDFSQGGFLLMSCYTSIT
ECCCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCEEHHHHHHHHH
SDYLFVALLSAKSSMTVLDDMELSQNNHLDLNNIQLAARIDLTEWQADKDSRKYISFIRG
HHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCEEEEEEEEHHHHCCCCHHHHHHHHHHC
RAGRKVADFFLDFMGCVEGVNTKAQNKTLMNAVEDFVASSELTKDERQQCRNKVFEYCSE
CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
RFDEGADIEIKDLADELADQGMDSFYDFARGGSYDLDEEFPADKSTLRQLKKFSGTGGGV
HCCCCCCEEHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCE
TLSFDGGHLGQRVIYDPISDTILIKGVPANLKDQLDRRLKGE
EEEECCCCCCCEEEECCCCCEEEEECCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
SINIEHAIIHEISQDSQGQLRCRLRPQPLLNGQAVEVMLDELHQTYTGKAGKGFGYFGI
CCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEE
HGDDGEANPAFANALTQYRGGDLGFVEFSGQASKLLQEELSKYDFSQGGFLLMSCYTSIT
ECCCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCEEHHHHHHHHH
SDYLFVALLSAKSSMTVLDDMELSQNNHLDLNNIQLAARIDLTEWQADKDSRKYISFIRG
HHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCEEEEEEEEHHHHCCCCHHHHHHHHHHC
RAGRKVADFFLDFMGCVEGVNTKAQNKTLMNAVEDFVASSELTKDERQQCRNKVFEYCSE
CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
RFDEGADIEIKDLADELADQGMDSFYDFARGGSYDLDEEFPADKSTLRQLKKFSGTGGGV
HCCCCCCEEHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCE
TLSFDGGHLGQRVIYDPISDTILIKGVPANLKDQLDRRLKGE
EEEECCCCCCCEEEECCCCCEEEEECCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA