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The map label for this gene is rpfG [H]

Identifier: 160875729

GI number: 160875729

Start: 3102321

End: 3103586

Strand: Direct

Name: rpfG [H]

Synonym: Sbal195_2617

Alternate gene names: 160875729

Gene position: 3102321-3103586 (Clockwise)

Preceding gene: 160875727

Following gene: 160875734

Centisome position: 58.02

GC content: 45.81

Gene sequence:

>1266_bases
ATGAAAAAAAGCTGTAAAGTCTCAGTCCATCAACTTCAAGTCGGCAACTTTGTGCGTTTGCCCGTGGCTTGGAAAGATCA
TCCCTTTTTATTCAGTAGCTTTCATATTAAACAAGCTGCGCAAATCGAGTTGATTAAAAATCTGGGCATAGAACATGTCA
TCGTCGATTTAGAGCGCAGTGACGTCGCCCCGATACATGCAGATGCGGTCAACCCAATCAAACTGCCGCCAAGTGCTGAG
ATCAATGTGCTTAAAAACGACATGGATCAGTACAAAGCTGAACAAATCGAAGTGCAAAAGAAATTACGCCGCGACATTCA
TAAAACCGAGCAAAACTTTACCCGCTCGGTCGCCATGATGCGCAGCCTCATTTCTAAGCTGCGTAATCGCCCCTTAAATG
CGGTCGATGACGCTAAAGATTTGGTGCACACCATAGTCGAGCAGCTGCTCAACTCAGATAACTTAGTGCTGCATTTGATG
AGCGATGCTAAGCAGGATGAAAGCATTTACTACCATTCTTTGAACGTCGCGATTCTTTCTATGTTAATCGCCAAAGAACT
CGAATGGGATAGAAGTGAGATTGAAACAGTGGGTCTCAGTGCCCTATTCCACGACGTGGGTAAATTAAAAGTCCCACCAC
AAATTCTTAAAAAATCGACCCCTTGGTCAGCGCCAGAGCTTAATTTCATCAAGCAGCATCCGTTACTTGGGATAGAACTG
CTCAAATTAGCCGATAATTTCCCACAAGCGGCCTTGGCTCCCATCACCAATCACCACGAGTGTCTCGATGGCAGTGGTTA
TCCCAAAGGCTTAAAGGAAGAGGCGTTAGACAAAGTATCGCAACTGATTGCGGTAGTGAACGAATACGATTCCCTGTGTT
ACCCAAGCCAACAGGGCAAAGCCAGAATGCCCTATGCCGCTCTGGGGCATTTGTACAAGCAATACAAGACTAAGCTCAAT
CAAGAATATATTGGCAAGATGATCAAGATGTTAGGCATTTATCCTCCTGGCAGTGTGGTGGAATTATCCAGCGGTCAATA
TGCCATGGTGATGTCAGTTAACTTAAGCAAGCTGCTATGCCCTAAGATATTGGTTTACGATGCGTTAGTCCCTAAAGATC
AAGCGCCTATCGTTGATTTAGAGATTGAAGGGATCAGCATAGTGCGCTGCTTACCGCCTGCGGCGCTTCCCGAAAAAGTC
CACGAGTACCTGAATCCCCGCGAACGAGTAAGTTACTACTTTGGCGGCGATAGTCGTAAACAGTGA

Upstream 100 bases:

>100_bases
CTACTTTCTAGGCTTACTATGCTGACATGTTAGTTAAGTAATTGTAAAGCAGCATCATTGAGATAAAATAACCCACATCA
GGCTTCACGATAACAAGAAT

Downstream 100 bases:

>100_bases
TTTAGTTAATAGGCTCAGCGATTCATGCCTAACGGATTTCACGCATTTATTCAAAGTCATCGAGTCAAACTCTTTGGTAA
AAGTCATTGAATAAACGTGA

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MKKSCKVSVHQLQVGNFVRLPVAWKDHPFLFSSFHIKQAAQIELIKNLGIEHVIVDLERSDVAPIHADAVNPIKLPPSAE
INVLKNDMDQYKAEQIEVQKKLRRDIHKTEQNFTRSVAMMRSLISKLRNRPLNAVDDAKDLVHTIVEQLLNSDNLVLHLM
SDAKQDESIYYHSLNVAILSMLIAKELEWDRSEIETVGLSALFHDVGKLKVPPQILKKSTPWSAPELNFIKQHPLLGIEL
LKLADNFPQAALAPITNHHECLDGSGYPKGLKEEALDKVSQLIAVVNEYDSLCYPSQQGKARMPYAALGHLYKQYKTKLN
QEYIGKMIKMLGIYPPGSVVELSSGQYAMVMSVNLSKLLCPKILVYDALVPKDQAPIVDLEIEGISIVRCLPPAALPEKV
HEYLNPRERVSYYFGGDSRKQ

Sequences:

>Translated_421_residues
MKKSCKVSVHQLQVGNFVRLPVAWKDHPFLFSSFHIKQAAQIELIKNLGIEHVIVDLERSDVAPIHADAVNPIKLPPSAE
INVLKNDMDQYKAEQIEVQKKLRRDIHKTEQNFTRSVAMMRSLISKLRNRPLNAVDDAKDLVHTIVEQLLNSDNLVLHLM
SDAKQDESIYYHSLNVAILSMLIAKELEWDRSEIETVGLSALFHDVGKLKVPPQILKKSTPWSAPELNFIKQHPLLGIEL
LKLADNFPQAALAPITNHHECLDGSGYPKGLKEEALDKVSQLIAVVNEYDSLCYPSQQGKARMPYAALGHLYKQYKTKLN
QEYIGKMIKMLGIYPPGSVVELSSGQYAMVMSVNLSKLLCPKILVYDALVPKDQAPIVDLEIEGISIVRCLPPAALPEKV
HEYLNPRERVSYYFGGDSRKQ
>Mature_421_residues
MKKSCKVSVHQLQVGNFVRLPVAWKDHPFLFSSFHIKQAAQIELIKNLGIEHVIVDLERSDVAPIHADAVNPIKLPPSAE
INVLKNDMDQYKAEQIEVQKKLRRDIHKTEQNFTRSVAMMRSLISKLRNRPLNAVDDAKDLVHTIVEQLLNSDNLVLHLM
SDAKQDESIYYHSLNVAILSMLIAKELEWDRSEIETVGLSALFHDVGKLKVPPQILKKSTPWSAPELNFIKQHPLLGIEL
LKLADNFPQAALAPITNHHECLDGSGYPKGLKEEALDKVSQLIAVVNEYDSLCYPSQQGKARMPYAALGHLYKQYKTKLN
QEYIGKMIKMLGIYPPGSVVELSSGQYAMVMSVNLSKLLCPKILVYDALVPKDQAPIVDLEIEGISIVRCLPPAALPEKV
HEYLNPRERVSYYFGGDSRKQ

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 47463; Mature: 47463

Theoretical pI: Translated: 7.97; Mature: 7.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSCKVSVHQLQVGNFVRLPVAWKDHPFLFSSFHIKQAAQIELIKNLGIEHVIVDLERS
CCCCCCEEHEEEECCCEEEECEEECCCCCEEEHHHHHHHHHHHHHHHCCCEEEEEEECCC
DVAPIHADAVNPIKLPPSAEINVLKNDMDQYKAEQIEVQKKLRRDIHKTEQNFTRSVAMM
CCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSLISKLRNRPLNAVDDAKDLVHTIVEQLLNSDNLVLHLMSDAKQDESIYYHSLNVAILS
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEHHHHHHHH
MLIAKELEWDRSEIETVGLSALFHDVGKLKVPPQILKKSTPWSAPELNFIKQHPLLGIEL
HHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCHHHHCCCHHHHH
LKLADNFPQAALAPITNHHECLDGSGYPKGLKEEALDKVSQLIAVVNEYDSLCYPSQQGK
HHHHCCCCCHHHCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
ARMPYAALGHLYKQYKTKLNQEYIGKMIKMLGIYPPGSVVELSSGQYAMVMSVNLSKLLC
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEECCHHHHHH
PKILVYDALVPKDQAPIVDLEIEGISIVRCLPPAALPEKVHEYLNPRERVSYYFGGDSRK
HHHHHHHHHCCCCCCCEEEEEECCEEEEEECCCCCCHHHHHHHCCHHHHEEEEECCCCCC
Q
C
>Mature Secondary Structure
MKKSCKVSVHQLQVGNFVRLPVAWKDHPFLFSSFHIKQAAQIELIKNLGIEHVIVDLERS
CCCCCCEEHEEEECCCEEEECEEECCCCCEEEHHHHHHHHHHHHHHHCCCEEEEEEECCC
DVAPIHADAVNPIKLPPSAEINVLKNDMDQYKAEQIEVQKKLRRDIHKTEQNFTRSVAMM
CCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSLISKLRNRPLNAVDDAKDLVHTIVEQLLNSDNLVLHLMSDAKQDESIYYHSLNVAILS
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEHHHHHHHH
MLIAKELEWDRSEIETVGLSALFHDVGKLKVPPQILKKSTPWSAPELNFIKQHPLLGIEL
HHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCHHHHCCCHHHHH
LKLADNFPQAALAPITNHHECLDGSGYPKGLKEEALDKVSQLIAVVNEYDSLCYPSQQGK
HHHHCCCCCHHHCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
ARMPYAALGHLYKQYKTKLNQEYIGKMIKMLGIYPPGSVVELSSGQYAMVMSVNLSKLLC
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEECCHHHHHH
PKILVYDALVPKDQAPIVDLEIEGISIVRCLPPAALPEKVHEYLNPRERVSYYFGGDSRK
HHHHHHHHHCCCCCCCEEEEEECCEEEEEECCCCCCHHHHHHHCCHHHHEEEEECCCCCC
Q
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]