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The map label for this gene is udk

Identifier: 160875688

GI number: 160875688

Start: 3049331

End: 3049969

Strand: Reverse

Name: udk

Synonym: Sbal195_2576

Alternate gene names: 160875688

Gene position: 3049969-3049331 (Counterclockwise)

Preceding gene: 160875689

Following gene: 160875687

Centisome position: 57.04

GC content: 44.29

Gene sequence:

>639_bases
ATGAATTCTCAGCAGTGTGTCATTATTGCAATTGCTGGCGCGTCAGCATCGGGCAAAAGTTTAATTGCCAAAACGATTTT
TGACGAATTACGCCGCGATTTAGGCACAGATCAAATTGGGGTAATTAATGAAGACGCGTACTATCGCGATCAGAGTCATT
TATCCATGGATGAACGGGTATTAACGAATTACGATCATCCAAAAGCGTTGGACCATCAACTGTTGTGCACCCATTTACAG
TTGCTGAAGTCTGGCGAAGCTGTTGATATCCCTTGTTATAGCTACACAGAACACACTCGTATAGCAGAAACCCTGACGAT
GACACCAAAAAAGGTGATCATTTTAGAAGGTATCTTACTGCTGACCGATCCTAAGTTACGTGCGCTGATGGACGCGAGTG
TGTTTATGGACACACCGCTGGACATTTGTTTCCTACGTCGCCTAACCCGTGATGTGGCGGAACGCGGCCGTACGATGGAA
TCTGTGATTTCTCAGTACAAGAAAACCGTGCGTCCTATGTTCTTACAGTTTATCGAACCGTCGAAACAATACGCCGATAT
TATCGTTCCCCGTGGCGGTAAGAATCGTATTGCGACCGATATTTTAAAAACTCGTATCCAACATTTACTGGCAAAATAA

Upstream 100 bases:

>100_bases
ATCGGGAAATTGCCCGTAAAGTGGGCGCAGAATTGGCTTTAAAGCAAAGCCAGAAAACAGTTTCTATTAGTGTTTCAGAT
GACGAGTAAGGTTTAAGGGT

Downstream 100 bases:

>100_bases
CGACATAAAAACTCAAGGAGTAATAGGCAAGATGCGCTTAACCGATATCGAAATTGAACAGGCCCTTGATAACGGCACTA
TCGTAATAGAACCTCGCCCA

Product: uridine kinase

Products: NA

Alternate protein names: Cytidine monophosphokinase; Uridine monophosphokinase

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MNSQQCVIIAIAGASASGKSLIAKTIFDELRRDLGTDQIGVINEDAYYRDQSHLSMDERVLTNYDHPKALDHQLLCTHLQ
LLKSGEAVDIPCYSYTEHTRIAETLTMTPKKVIILEGILLLTDPKLRALMDASVFMDTPLDICFLRRLTRDVAERGRTME
SVISQYKKTVRPMFLQFIEPSKQYADIIVPRGGKNRIATDILKTRIQHLLAK

Sequences:

>Translated_212_residues
MNSQQCVIIAIAGASASGKSLIAKTIFDELRRDLGTDQIGVINEDAYYRDQSHLSMDERVLTNYDHPKALDHQLLCTHLQ
LLKSGEAVDIPCYSYTEHTRIAETLTMTPKKVIILEGILLLTDPKLRALMDASVFMDTPLDICFLRRLTRDVAERGRTME
SVISQYKKTVRPMFLQFIEPSKQYADIIVPRGGKNRIATDILKTRIQHLLAK
>Mature_212_residues
MNSQQCVIIAIAGASASGKSLIAKTIFDELRRDLGTDQIGVINEDAYYRDQSHLSMDERVLTNYDHPKALDHQLLCTHLQ
LLKSGEAVDIPCYSYTEHTRIAETLTMTPKKVIILEGILLLTDPKLRALMDASVFMDTPLDICFLRRLTRDVAERGRTME
SVISQYKKTVRPMFLQFIEPSKQYADIIVPRGGKNRIATDILKTRIQHLLAK

Specific function: Pyrimidine salvage pathway. [C]

COG id: COG0572

COG function: function code F; Uridine kinase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the uridine kinase family

Homologues:

Organism=Homo sapiens, GI301129207, Length=210, Percent_Identity=37.6190476190476, Blast_Score=155, Evalue=3e-38,
Organism=Homo sapiens, GI57863312, Length=210, Percent_Identity=37.6190476190476, Blast_Score=155, Evalue=3e-38,
Organism=Homo sapiens, GI18699734, Length=216, Percent_Identity=35.1851851851852, Blast_Score=152, Evalue=2e-37,
Organism=Homo sapiens, GI13899253, Length=214, Percent_Identity=32.2429906542056, Blast_Score=134, Evalue=5e-32,
Organism=Homo sapiens, GI209863022, Length=152, Percent_Identity=27.6315789473684, Blast_Score=79, Evalue=3e-15,
Organism=Escherichia coli, GI87082034, Length=209, Percent_Identity=70.8133971291866, Blast_Score=317, Evalue=4e-88,
Organism=Caenorhabditis elegans, GI17539894, Length=207, Percent_Identity=35.2657004830918, Blast_Score=144, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI17539892, Length=207, Percent_Identity=35.2657004830918, Blast_Score=144, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI71981181, Length=215, Percent_Identity=33.953488372093, Blast_Score=126, Evalue=7e-30,
Organism=Saccharomyces cerevisiae, GI6324339, Length=151, Percent_Identity=33.7748344370861, Blast_Score=108, Evalue=7e-25,
Organism=Drosophila melanogaster, GI24649624, Length=210, Percent_Identity=36.6666666666667, Blast_Score=152, Evalue=1e-37,
Organism=Drosophila melanogaster, GI221458995, Length=209, Percent_Identity=36.3636363636364, Blast_Score=151, Evalue=3e-37,
Organism=Drosophila melanogaster, GI28573516, Length=204, Percent_Identity=37.2549019607843, Blast_Score=148, Evalue=2e-36,
Organism=Drosophila melanogaster, GI28573514, Length=204, Percent_Identity=37.2549019607843, Blast_Score=148, Evalue=2e-36,
Organism=Drosophila melanogaster, GI28573512, Length=204, Percent_Identity=37.2549019607843, Blast_Score=148, Evalue=2e-36,
Organism=Drosophila melanogaster, GI45550449, Length=204, Percent_Identity=37.2549019607843, Blast_Score=148, Evalue=2e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): URK_SHEB2 (B8E960)

Other databases:

- EMBL:   CP001252
- RefSeq:   YP_002357816.1
- ProteinModelPortal:   B8E960
- SMR:   B8E960
- GeneID:   7090055
- GenomeReviews:   CP001252_GR
- KEGG:   sbp:Sbal223_1888
- HOGENOM:   HBG527126
- OMA:   DQIGVIA
- ProtClustDB:   PRK05480
- GO:   GO:0005737
- HAMAP:   MF_00551
- InterPro:   IPR006083
- InterPro:   IPR000764
- PANTHER:   PTHR10285:SF6
- PRINTS:   PR00988
- TIGRFAMs:   TIGR00235

Pfam domain/function: PF00485 PRK

EC number: =2.7.1.48

Molecular weight: Translated: 24032; Mature: 24032

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSQQCVIIAIAGASASGKSLIAKTIFDELRRDLGTDQIGVINEDAYYRDQSHLSMDERV
CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCHHHCCCHHCCHHHHH
LTNYDHPKALDHQLLCTHLQLLKSGEAVDIPCYSYTEHTRIAETLTMTPKKVIILEGILL
HHCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHCCCCEEHEECCCCE
LTDPKLRALMDASVFMDTPLDICFLRRLTRDVAERGRTMESVISQYKKTVRPMFLQFIEP
ECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
SKQYADIIVPRGGKNRIATDILKTRIQHLLAK
CHHHHEEEECCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNSQQCVIIAIAGASASGKSLIAKTIFDELRRDLGTDQIGVINEDAYYRDQSHLSMDERV
CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCHHHCCCHHCCHHHHH
LTNYDHPKALDHQLLCTHLQLLKSGEAVDIPCYSYTEHTRIAETLTMTPKKVIILEGILL
HHCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHCCCCEEHEECCCCE
LTDPKLRALMDASVFMDTPLDICFLRRLTRDVAERGRTMESVISQYKKTVRPMFLQFIEP
ECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
SKQYADIIVPRGGKNRIATDILKTRIQHLLAK
CHHHHEEEECCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA