| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875666
Identifier: 160875666
GI number: 160875666
Start: 3022703
End: 3025018
Strand: Reverse
Name: 160875666
Synonym: Sbal195_2554
Alternate gene names: NA
Gene position: 3025018-3022703 (Counterclockwise)
Preceding gene: 160875667
Following gene: 160875665
Centisome position: 56.57
GC content: 48.1
Gene sequence:
>2316_bases ATGTTAGAAAAACTGGTCAACGGATTTGAGTCATTTTTATTCCGCAATCGTGCGTGGGTCGTCGGCATTTTTGTGTTTTT GACGTTGTTTTTAGGCTTTCAAGCCAGTCAACTCAAAATGGATGCGGCCTTCATTAAAAACATTCCACTGCATCACAGTT ATATGCAGACCTACCTGAAACACCAAAAAGATTTTGGTGGCGCCAACAGCATCATGGTGGCGGTGGAAGACACCAGCGGC AATATTTTTAATGCGAACTATTTTGATACCTTAAAAAACGTGCACGATCAGCTGTTTTTTATACCAGGGGTTGATCGCGC GCAGGTGAAATCAATTTTTTCGCCTTCTACTCGTTTTACAGAAGTCGTTGAAGATGGTTTTGCTGGCGGGCCCGTTATTC CTGCGGATTTTTCGACCTCAGTATCAGGGCTCGAAACCGTGCGCGATAATATTGAAAAAGCGGGCATCGTTGGCCGATTA ATTGCCAACGATTACAGTGCGGCCATGGTGTCGGCGCAGTTAATGGACTTTGATCCACAAACAGGTAAACCCTTAGATAC CATTGCCTTTGCGGCGCAGCTCGAAAAAGAACTTAGGGGTAAGTTCGAAACCGACAAGGTTAAAATTCACATCATAGGTT TTGCCAAGATGGCGGGGGATGTGGCCGATGGTGCTAAGGGCGTATTGCTGTTCTTTGTGATCGCGATTTTGATCACCGCC GTCATGGTTTACCTCTTCTCTAAATCGATCATTCTGACCGTTTTACCCCTCGTCTGCAGTTTAACCGCTGTGGTCTGGCA GCTTGGATTATTGACTGTCATAGGCTTTGGCCTCGATCCCATGTCGATTCTGGTGCCGTTTTTGGTATTCGCCATCGGGG TCAGTCACGGGGTGCAAATGATCAACGCGGTAAGGCGCCGCGTGATGGACGGACAAACCACCAAAGCGGCGGCGGCTTCG GCATTTCGCAGTTTGTTAGTGCCAGGTGGTGTCGCATTATTGTCTGATACAGTTGGTTTTATTACCCTGTTGTCTATTGA TATAGGGATTATTCGCGAGCTCGCGATTTCGGCATCACTCGGTGTGGGCGTGATCATTTTCACTAACCTTATCCTCTTGC CTTTGGTGATTTCTTTTACTGAAATCAAAGTCAATAAAACCGCAGATCCGACGGCTGAAGAAGTCCGTACCGAAGCGATT TGGCGTTTCTTAGCACGTTTCGCGACGCCTAAATACGCTGTGGTGGTGATTATTGCCACTGTGGTGTTGTATTTTGCCGG TCTGCAACAAGCCAATCAGATGAAGATTGGTGACTTACAGGGCGGGGCGCCAGCGTTACACCAAGATTCGCGCTATAACC TCGATACCTTCTTCATCACAGATCATTTCTCCATCACTACCGACGTGATGACTGTGATTGTTGAGGCGGCGCCCGAGGCT TGTACTTACCACGATGTGCTGACTCAAATTGATGAGTTTGAATGGTTAGTGCGTAATACGCCTGGGGTCGAGTCGACTGT GAGTCTGGCGTCGGTGGCTAAAAAAGTGAACGCAGGCTTTAACGAAGGTAATCCAAGGTGGGAAGTGCTGCCGCGCACGA CCGCGAGTTTAGTGCAGGCCATTGGCCAAATTCCGACGACCTCTGGTTTGTTAAATGGCGATTGTTCTGTCATGCCTGTG TATTTGTTTATGAAAGATCACAAGGCAGAAACCATAGAAACTGTGGTCGCTAAGGTGAAAGCCGTCGCCGCGAAAATGGA TAACGACAAGCTGCAGTTTAAACTGGCATCGGGTCCTGTGGGCGTGATGGCCGCGACCAACGAAGCGGTAGCCGAAGCGC AATTACCTATGATGTTATACGTCTATGGTGCCGTGTTTGTACTGTGCTTAATCAGCTTTAAATCCTTGAAAGCGACTGTG GCGGTAATTATCCCGCTATATGTGGTGTCGACATTGGCGCAAGCCTTGATGACGCAACTGGATATTGGCTTAGCAGTTAG TACCTTACCTGTTATTGCACTGGGTGTCGGTATCGGTGTGGATTACGGTATTTATATCCTCTCGACCATGTCGTCTAAGC TCTCGAACGGTATGCCGGTGCAACAGGCATACTATGAGGCGTTGGTCGAACGGGGCAGTGCGGTGATCTTTACTGGCCTC ACATTGGCGATTGGTGTCAGTACTTGGTTCTTCTCGGCACTTAAATTCCAAATGGACATGGGAATATTGTTAACATTCAT GTTTGTGGTAAATATGCTCGGCGCCATAATTATCCTTCCTGCATTGGCCGCCGTTTTCTGGCGCCAACCTAAGTAG
Upstream 100 bases:
>100_bases TTGCGAAGGATAATCAAGGGAATATGTGGTTATCCGGCAGCCAAGGGCTGTTTATTCTTAAGCCATAAAATTTTAAAACT ACAATAACAGGGCCGAGAAG
Downstream 100 bases:
>100_bases GGTCTACAAATGGGGAGCTTAGCTCCCCATTTGTTTTTGAATACTTAGTCTGCTTTATCGATTGTTTGGTCATTTGTCAT TCATTGTTTACGCGAATACT
Product: hypothetical protein
Products: NA
Alternate protein names: RND Superfamily Exporter; Patched Family Protein; Efflux Transporter Hydrophobe/Amphiphile Efflux-3 Family; Exporter Of RND Superfamily; Exporter Of RND Superfamily Protein; Exporter Of RND Superfamily Protein-Like Protein; Inner Membrane Transporter; Transporter Protein; Polyketide Cyclase/Dehydrase; RND Family Multidrug Efflux Transporter; RND Superfamily Transporter; Mmpl Family; Exporter; Exporters Of RND Superfamily; RND Family Transporter; RND Family Efflux Transporter; Transporter RND Superfamily
Number of amino acids: Translated: 771; Mature: 771
Protein sequence:
>771_residues MLEKLVNGFESFLFRNRAWVVGIFVFLTLFLGFQASQLKMDAAFIKNIPLHHSYMQTYLKHQKDFGGANSIMVAVEDTSG NIFNANYFDTLKNVHDQLFFIPGVDRAQVKSIFSPSTRFTEVVEDGFAGGPVIPADFSTSVSGLETVRDNIEKAGIVGRL IANDYSAAMVSAQLMDFDPQTGKPLDTIAFAAQLEKELRGKFETDKVKIHIIGFAKMAGDVADGAKGVLLFFVIAILITA VMVYLFSKSIILTVLPLVCSLTAVVWQLGLLTVIGFGLDPMSILVPFLVFAIGVSHGVQMINAVRRRVMDGQTTKAAAAS AFRSLLVPGGVALLSDTVGFITLLSIDIGIIRELAISASLGVGVIIFTNLILLPLVISFTEIKVNKTADPTAEEVRTEAI WRFLARFATPKYAVVVIIATVVLYFAGLQQANQMKIGDLQGGAPALHQDSRYNLDTFFITDHFSITTDVMTVIVEAAPEA CTYHDVLTQIDEFEWLVRNTPGVESTVSLASVAKKVNAGFNEGNPRWEVLPRTTASLVQAIGQIPTTSGLLNGDCSVMPV YLFMKDHKAETIETVVAKVKAVAAKMDNDKLQFKLASGPVGVMAATNEAVAEAQLPMMLYVYGAVFVLCLISFKSLKATV AVIIPLYVVSTLAQALMTQLDIGLAVSTLPVIALGVGIGVDYGIYILSTMSSKLSNGMPVQQAYYEALVERGSAVIFTGL TLAIGVSTWFFSALKFQMDMGILLTFMFVVNMLGAIIILPALAAVFWRQPK
Sequences:
>Translated_771_residues MLEKLVNGFESFLFRNRAWVVGIFVFLTLFLGFQASQLKMDAAFIKNIPLHHSYMQTYLKHQKDFGGANSIMVAVEDTSG NIFNANYFDTLKNVHDQLFFIPGVDRAQVKSIFSPSTRFTEVVEDGFAGGPVIPADFSTSVSGLETVRDNIEKAGIVGRL IANDYSAAMVSAQLMDFDPQTGKPLDTIAFAAQLEKELRGKFETDKVKIHIIGFAKMAGDVADGAKGVLLFFVIAILITA VMVYLFSKSIILTVLPLVCSLTAVVWQLGLLTVIGFGLDPMSILVPFLVFAIGVSHGVQMINAVRRRVMDGQTTKAAAAS AFRSLLVPGGVALLSDTVGFITLLSIDIGIIRELAISASLGVGVIIFTNLILLPLVISFTEIKVNKTADPTAEEVRTEAI WRFLARFATPKYAVVVIIATVVLYFAGLQQANQMKIGDLQGGAPALHQDSRYNLDTFFITDHFSITTDVMTVIVEAAPEA CTYHDVLTQIDEFEWLVRNTPGVESTVSLASVAKKVNAGFNEGNPRWEVLPRTTASLVQAIGQIPTTSGLLNGDCSVMPV YLFMKDHKAETIETVVAKVKAVAAKMDNDKLQFKLASGPVGVMAATNEAVAEAQLPMMLYVYGAVFVLCLISFKSLKATV AVIIPLYVVSTLAQALMTQLDIGLAVSTLPVIALGVGIGVDYGIYILSTMSSKLSNGMPVQQAYYEALVERGSAVIFTGL TLAIGVSTWFFSALKFQMDMGILLTFMFVVNMLGAIIILPALAAVFWRQPK >Mature_771_residues MLEKLVNGFESFLFRNRAWVVGIFVFLTLFLGFQASQLKMDAAFIKNIPLHHSYMQTYLKHQKDFGGANSIMVAVEDTSG NIFNANYFDTLKNVHDQLFFIPGVDRAQVKSIFSPSTRFTEVVEDGFAGGPVIPADFSTSVSGLETVRDNIEKAGIVGRL IANDYSAAMVSAQLMDFDPQTGKPLDTIAFAAQLEKELRGKFETDKVKIHIIGFAKMAGDVADGAKGVLLFFVIAILITA VMVYLFSKSIILTVLPLVCSLTAVVWQLGLLTVIGFGLDPMSILVPFLVFAIGVSHGVQMINAVRRRVMDGQTTKAAAAS AFRSLLVPGGVALLSDTVGFITLLSIDIGIIRELAISASLGVGVIIFTNLILLPLVISFTEIKVNKTADPTAEEVRTEAI WRFLARFATPKYAVVVIIATVVLYFAGLQQANQMKIGDLQGGAPALHQDSRYNLDTFFITDHFSITTDVMTVIVEAAPEA CTYHDVLTQIDEFEWLVRNTPGVESTVSLASVAKKVNAGFNEGNPRWEVLPRTTASLVQAIGQIPTTSGLLNGDCSVMPV YLFMKDHKAETIETVVAKVKAVAAKMDNDKLQFKLASGPVGVMAATNEAVAEAQLPMMLYVYGAVFVLCLISFKSLKATV AVIIPLYVVSTLAQALMTQLDIGLAVSTLPVIALGVGIGVDYGIYILSTMSSKLSNGMPVQQAYYEALVERGSAVIFTGL TLAIGVSTWFFSALKFQMDMGILLTFMFVVNMLGAIIILPALAAVFWRQPK
Specific function: Unknown
COG id: COG1033
COG function: function code R; Predicted exporters of the RND superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83471; Mature: 83471
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: PS50156 SSD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEKLVNGFESFLFRNRAWVVGIFVFLTLFLGFQASQLKMDAAFIKNIPLHHSYMQTYLK CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHH HQKDFGGANSIMVAVEDTSGNIFNANYFDTLKNVHDQLFFIPGVDRAQVKSIFSPSTRFT HHHCCCCCCEEEEEEECCCCCEECCHHHHHHHHHHHCEEECCCCCHHHHHHHHCCCHHHH EVVEDGFAGGPVIPADFSTSVSGLETVRDNIEKAGIVGRLIANDYSAAMVSAQLMDFDPQ HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC TGKPLDTIAFAAQLEKELRGKFETDKVKIHIIGFAKMAGDVADGAKGVLLFFVIAILITA CCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEHHHHCCCCCCCHHHHHHHHHHHHHHH VMVYLFSKSIILTVLPLVCSLTAVVWQLGLLTVIGFGLDPMSILVPFLVFAIGVSHGVQM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH INAVRRRVMDGQTTKAAAASAFRSLLVPGGVALLSDTVGFITLLSIDIGIIRELAISASL HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GVGVIIFTNLILLPLVISFTEIKVNKTADPTAEEVRTEAIWRFLARFATPKYAVVVIIAT CHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH VVLYFAGLQQANQMKIGDLQGGAPALHQDSRYNLDTFFITDHFSITTDVMTVIVEAAPEA HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCC CTYHDVLTQIDEFEWLVRNTPGVESTVSLASVAKKVNAGFNEGNPRWEVLPRTTASLVQA HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHH IGQIPTTSGLLNGDCSVMPVYLFMKDHKAETIETVVAKVKAVAAKMDNDKLQFKLASGPV HHCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCE GVMAATNEAVAEAQLPMMLYVYGAVFVLCLISFKSLKATVAVIIPLYVVSTLAQALMTQL EEEEECCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DIGLAVSTLPVIALGVGIGVDYGIYILSTMSSKLSNGMPVQQAYYEALVERGSAVIFTGL HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEHH TLAIGVSTWFFSALKFQMDMGILLTFMFVVNMLGAIIILPALAAVFWRQPK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLEKLVNGFESFLFRNRAWVVGIFVFLTLFLGFQASQLKMDAAFIKNIPLHHSYMQTYLK CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHH HQKDFGGANSIMVAVEDTSGNIFNANYFDTLKNVHDQLFFIPGVDRAQVKSIFSPSTRFT HHHCCCCCCEEEEEEECCCCCEECCHHHHHHHHHHHCEEECCCCCHHHHHHHHCCCHHHH EVVEDGFAGGPVIPADFSTSVSGLETVRDNIEKAGIVGRLIANDYSAAMVSAQLMDFDPQ HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC TGKPLDTIAFAAQLEKELRGKFETDKVKIHIIGFAKMAGDVADGAKGVLLFFVIAILITA CCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEHHHHCCCCCCCHHHHHHHHHHHHHHH VMVYLFSKSIILTVLPLVCSLTAVVWQLGLLTVIGFGLDPMSILVPFLVFAIGVSHGVQM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH INAVRRRVMDGQTTKAAAASAFRSLLVPGGVALLSDTVGFITLLSIDIGIIRELAISASL HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GVGVIIFTNLILLPLVISFTEIKVNKTADPTAEEVRTEAIWRFLARFATPKYAVVVIIAT CHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH VVLYFAGLQQANQMKIGDLQGGAPALHQDSRYNLDTFFITDHFSITTDVMTVIVEAAPEA HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCC CTYHDVLTQIDEFEWLVRNTPGVESTVSLASVAKKVNAGFNEGNPRWEVLPRTTASLVQA HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHH IGQIPTTSGLLNGDCSVMPVYLFMKDHKAETIETVVAKVKAVAAKMDNDKLQFKLASGPV HHCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCE GVMAATNEAVAEAQLPMMLYVYGAVFVLCLISFKSLKATVAVIIPLYVVSTLAQALMTQL EEEEECCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DIGLAVSTLPVIALGVGIGVDYGIYILSTMSSKLSNGMPVQQAYYEALVERGSAVIFTGL HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEHH TLAIGVSTWFFSALKFQMDMGILLTFMFVVNMLGAIIILPALAAVFWRQPK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA