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The map label for this gene is yciM [H]

Identifier: 160875505

GI number: 160875505

Start: 2823949

End: 2825109

Strand: Reverse

Name: yciM [H]

Synonym: Sbal195_2393

Alternate gene names: 160875505

Gene position: 2825109-2823949 (Counterclockwise)

Preceding gene: 160875506

Following gene: 160875504

Centisome position: 52.83

GC content: 47.11

Gene sequence:

>1161_bases
ATGCTTGAGATACTCTTTCTGTTGCTTCCCATTGCTGCCGCCTACGGTTGGTATATGGGGCGACGGAGCATAAGGCAGAA
TCAAAGCAATCAACGTAAACAATTGAGCCGGGATTATTTTACTGGCCTCAATTTCTTACTGTCGAACGAATCGGATAAAG
CGGTTGATTTGTTTATCAGTATGCTAGATGTTGACGATGAAACCATAGATACCCATCTGTCACTCGGTTCGCTGTTTCGT
AAGCGAGGCGAGGTCGACCGCTCCATTCGTATCCATCAGAATTTAATTGCCCGTCCAAACCTAGCCAATGAGCAGCGCGA
CATCGCTATGATGGAGCTGGGTAAAGATTATCTGGCTGCGGGTTTTTACGACAGGGCCGAAGAAATCTTTATCAACTTGG
TTAGCCAAGATGATCACAGCGAAGAATCTGAAACTCAACTGATTGCTATCTATCAAGTGATTAAAGAGTGGCAAAAAGCC
ATTGATATCACTAAGCGTCTAAGTCGTAAACGTCAGCAAGTCTTAAAGCCGTTAACGGCTCATTTCTATTGCCAGTTAGC
CGATGAAGCCAGCGACGATGCACAGAAGATTAAACTGCTGCAACAGGCGCTGAAGCAAGATCCCCAATGCGGCCGAGCGT
TATTGACCTTAGCGAAAAAATACCTCGATATTCAAGATTATGCCCAGTGCAAGCAAATGCTGCTGCAACTGAAAAAAGCC
GATATCGAGCTTTTTGCCGATGCAATCCCCACGGCCAAACAAGTTTATCGCGACACACAAGACAAAGAAGGCTTCCAAGA
GTTACTGGCGGGCGCCATGGCCGATGGCGCGGGTGCTTCTGTAGTTGTCGCCTTAGCGCAGCACATGATAAGTCTGGATG
AGATTAAAGCGGCAGAGACCATGGTGCTCGATGCCCTATATCGGCATCCGACCATGAAAGGTTTTCAGCACTTGATGCAA
ATGCATTTGCGTCAAGCAGAGGAAGGGCAAGCCAAGCAAAGTTTAACTATGCTAGAGCAGCTCGTTGAGCAACAAATTAA
ATTCCGTCCAAGCTACCGTTGTAAAGAGTGTGGTTTCCCTTCCCATGCCCTTTACTGGCATTGTCCTTCCTGTAAAAACT
GGGGCAGTATCAAGCGGATCAGAGGCTTAGACGGCGAGTAA

Upstream 100 bases:

>100_bases
GCAAGCTACTATATCGTGCGCTTGAAATTGAGCTTAGCGACAACGAGAAAGAAACTAAACCAAGTGATGGCTAAAGCCCC
TCAGGATGTAGACGCCTAAT

Downstream 100 bases:

>100_bases
ATAAGATAATATCTATAGTTAGTGTAACTCTGTTGGAGAGATGATGACGACTAAACCTATCCTCGTAGCGCTTGATTACG
ATAACAAAAACCACGCTTTA

Product: tetratricopeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MLEILFLLLPIAAAYGWYMGRRSIRQNQSNQRKQLSRDYFTGLNFLLSNESDKAVDLFISMLDVDDETIDTHLSLGSLFR
KRGEVDRSIRIHQNLIARPNLANEQRDIAMMELGKDYLAAGFYDRAEEIFINLVSQDDHSEESETQLIAIYQVIKEWQKA
IDITKRLSRKRQQVLKPLTAHFYCQLADEASDDAQKIKLLQQALKQDPQCGRALLTLAKKYLDIQDYAQCKQMLLQLKKA
DIELFADAIPTAKQVYRDTQDKEGFQELLAGAMADGAGASVVVALAQHMISLDEIKAAETMVLDALYRHPTMKGFQHLMQ
MHLRQAEEGQAKQSLTMLEQLVEQQIKFRPSYRCKECGFPSHALYWHCPSCKNWGSIKRIRGLDGE

Sequences:

>Translated_386_residues
MLEILFLLLPIAAAYGWYMGRRSIRQNQSNQRKQLSRDYFTGLNFLLSNESDKAVDLFISMLDVDDETIDTHLSLGSLFR
KRGEVDRSIRIHQNLIARPNLANEQRDIAMMELGKDYLAAGFYDRAEEIFINLVSQDDHSEESETQLIAIYQVIKEWQKA
IDITKRLSRKRQQVLKPLTAHFYCQLADEASDDAQKIKLLQQALKQDPQCGRALLTLAKKYLDIQDYAQCKQMLLQLKKA
DIELFADAIPTAKQVYRDTQDKEGFQELLAGAMADGAGASVVVALAQHMISLDEIKAAETMVLDALYRHPTMKGFQHLMQ
MHLRQAEEGQAKQSLTMLEQLVEQQIKFRPSYRCKECGFPSHALYWHCPSCKNWGSIKRIRGLDGE
>Mature_386_residues
MLEILFLLLPIAAAYGWYMGRRSIRQNQSNQRKQLSRDYFTGLNFLLSNESDKAVDLFISMLDVDDETIDTHLSLGSLFR
KRGEVDRSIRIHQNLIARPNLANEQRDIAMMELGKDYLAAGFYDRAEEIFINLVSQDDHSEESETQLIAIYQVIKEWQKA
IDITKRLSRKRQQVLKPLTAHFYCQLADEASDDAQKIKLLQQALKQDPQCGRALLTLAKKYLDIQDYAQCKQMLLQLKKA
DIELFADAIPTAKQVYRDTQDKEGFQELLAGAMADGAGASVVVALAQHMISLDEIKAAETMVLDALYRHPTMKGFQHLMQ
MHLRQAEEGQAKQSLTMLEQLVEQQIKFRPSYRCKECGFPSHALYWHCPSCKNWGSIKRIRGLDGE

Specific function: Unknown

COG id: COG2956

COG function: function code G; Predicted N-acetylglucosaminyl transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 6 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI2367116, Length=379, Percent_Identity=44.3271767810026, Blast_Score=342, Evalue=3e-95,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44249; Mature: 44249

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEILFLLLPIAAAYGWYMGRRSIRQNQSNQRKQLSRDYFTGLNFLLSNESDKAVDLFIS
CHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
MLDVDDETIDTHLSLGSLFRKRGEVDRSIRIHQNLIARPNLANEQRDIAMMELGKDYLAA
HHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHHHH
GFYDRAEEIFINLVSQDDHSEESETQLIAIYQVIKEWQKAIDITKRLSRKRQQVLKPLTA
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HFYCQLADEASDDAQKIKLLQQALKQDPQCGRALLTLAKKYLDIQDYAQCKQMLLQLKKA
HHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
DIELFADAIPTAKQVYRDTQDKEGFQELLAGAMADGAGASVVVALAQHMISLDEIKAAET
HHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
MVLDALYRHPTMKGFQHLMQMHLRQAEEGQAKQSLTMLEQLVEQQIKFRPSYRCKECGFP
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCC
SHALYWHCPSCKNWGSIKRIRGLDGE
CCCEEEECCCCCCCCCHHHHCCCCCC
>Mature Secondary Structure
MLEILFLLLPIAAAYGWYMGRRSIRQNQSNQRKQLSRDYFTGLNFLLSNESDKAVDLFIS
CHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
MLDVDDETIDTHLSLGSLFRKRGEVDRSIRIHQNLIARPNLANEQRDIAMMELGKDYLAA
HHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHHHH
GFYDRAEEIFINLVSQDDHSEESETQLIAIYQVIKEWQKAIDITKRLSRKRQQVLKPLTA
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HFYCQLADEASDDAQKIKLLQQALKQDPQCGRALLTLAKKYLDIQDYAQCKQMLLQLKKA
HHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
DIELFADAIPTAKQVYRDTQDKEGFQELLAGAMADGAGASVVVALAQHMISLDEIKAAET
HHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
MVLDALYRHPTMKGFQHLMQMHLRQAEEGQAKQSLTMLEQLVEQQIKFRPSYRCKECGFP
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCC
SHALYWHCPSCKNWGSIKRIRGLDGE
CCCEEEECCCCCCCCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]