| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is 160875490
Identifier: 160875490
GI number: 160875490
Start: 2806013
End: 2806351
Strand: Reverse
Name: 160875490
Synonym: Sbal195_2378
Alternate gene names: NA
Gene position: 2806351-2806013 (Counterclockwise)
Preceding gene: 160875491
Following gene: 160875489
Centisome position: 52.48
GC content: 40.71
Gene sequence:
>339_bases ATGAGTGTAAGCATTGAAAATGATAGGAAAATTGCTGTCCTGTGCCGAATTGAGCCTGGCTGTCTCGGACCAGATGGTGT GGATCATATTGAGGCTTTTTGTACTTTGGCTCAGAAAGCGATGCAACATTTCGATGTCGATGTTGGCACTTGGTTGCTGA TCCCAAGATACGATAAAACCTTGGATGAGATGCAATACAGTGTTGCCAATAAATTACTTTCCCGCGAACAAGCGACTAAA TATCTTGTCTCTATCGGACGTGATATTGATAGTTTTGAAGAAAGATTTCAGGATAAACTCACCTCGCTGATTAATTTATA CCTTGCGAGAAAACCTTAA
Upstream 100 bases:
>100_bases GAGCAAGTAAGCCGTGACTTATCTGTGCAGACACGTAAAATTGCTGTTAAGTTTAAAGGGATATTTTAAGTTTAAGACTC GGTAACATGGGGCATCAGAA
Downstream 100 bases:
>100_bases ACTGAAGACTGCATGTTGCCGAGATTAACCTAATCTCTAGCCTCGGCACTTACATTATCCATAGCTCATTTTTTAAAGCC GTTTTTATTTTCGCATTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MSVSIENDRKIAVLCRIEPGCLGPDGVDHIEAFCTLAQKAMQHFDVDVGTWLLIPRYDKTLDEMQYSVANKLLSREQATK YLVSIGRDIDSFEERFQDKLTSLINLYLARKP
Sequences:
>Translated_112_residues MSVSIENDRKIAVLCRIEPGCLGPDGVDHIEAFCTLAQKAMQHFDVDVGTWLLIPRYDKTLDEMQYSVANKLLSREQATK YLVSIGRDIDSFEERFQDKLTSLINLYLARKP >Mature_111_residues SVSIENDRKIAVLCRIEPGCLGPDGVDHIEAFCTLAQKAMQHFDVDVGTWLLIPRYDKTLDEMQYSVANKLLSREQATKY LVSIGRDIDSFEERFQDKLTSLINLYLARKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12808; Mature: 12677
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVSIENDRKIAVLCRIEPGCLGPDGVDHIEAFCTLAQKAMQHFDVDVGTWLLIPRYDKT CCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHH LDEMQYSVANKLLSREQATKYLVSIGRDIDSFEERFQDKLTSLINLYLARKP HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SVSIENDRKIAVLCRIEPGCLGPDGVDHIEAFCTLAQKAMQHFDVDVGTWLLIPRYDKT CCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHH LDEMQYSVANKLLSREQATKYLVSIGRDIDSFEERFQDKLTSLINLYLARKP HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA