| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is cheW [H]
Identifier: 160875475
GI number: 160875475
Start: 2785364
End: 2785861
Strand: Reverse
Name: cheW [H]
Synonym: Sbal195_2363
Alternate gene names: 160875475
Gene position: 2785861-2785364 (Counterclockwise)
Preceding gene: 160875476
Following gene: 160875474
Centisome position: 52.1
GC content: 45.38
Gene sequence:
>498_bases ATGACCGCCAAAGTGGAATACAACTCCCATGATGAGGTGGAGTTTTTGAGTTTTATGCTGGGCGAAGAGCACTATGCCCT CGATATTATGTCTGTGAAAGAAATTCGCGGTTATGAGTCAGTCACCAAAATTGCCAACGCCCCCAGCTTTATAAAAGGCG TGATTAATCTTCGCGGTGACATAGTGCCCATAGTGGATTTACGGATGAAATTTGCTGTTGGAGCTGTCACTTATAACGAG TTCACTATCGTCATTATGCTCAACGTATTCGAGCGCATTGTCGGCATAGTGGTCGATGCCGTATCCGATGTGATTAAGCT ATCAGCGGAGGAGATCTTACCCGCACCAGAATTTGGGGTGGCGTTCGATAGTCGCTACCTCAAAGGCTTAGCCACGGTTG AAGATAAGATGGTAATTCTGGTAAATATTCAGGCTCTGATCAGCAGTGATGAGCTGGGTCTAATTGATGCAAATAGTCTG ACTGATCAGGAGCAATAA
Upstream 100 bases:
>100_bases ACCATCATGGGCGATGGCAGCGTCGCGTTGATCCTCGATGTCGAATCGCTCGCTCTGCACATTAAAAATTAAGGAAATAG CCATGGAGAGTCGATCAACT
Downstream 100 bases:
>100_bases TAATGGGTATCTTTAATATATTTGGAAATGCTGAAGCAAGCCTAGAAAAGGATGAAGAACGTCAGCGCTATTTTCAGTTG CTAGATAACAGTGGCAACAG
Product: putative CheW protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MTAKVEYNSHDEVEFLSFMLGEEHYALDIMSVKEIRGYESVTKIANAPSFIKGVINLRGDIVPIVDLRMKFAVGAVTYNE FTIVIMLNVFERIVGIVVDAVSDVIKLSAEEILPAPEFGVAFDSRYLKGLATVEDKMVILVNIQALISSDELGLIDANSL TDQEQ
Sequences:
>Translated_165_residues MTAKVEYNSHDEVEFLSFMLGEEHYALDIMSVKEIRGYESVTKIANAPSFIKGVINLRGDIVPIVDLRMKFAVGAVTYNE FTIVIMLNVFERIVGIVVDAVSDVIKLSAEEILPAPEFGVAFDSRYLKGLATVEDKMVILVNIQALISSDELGLIDANSL TDQEQ >Mature_164_residues TAKVEYNSHDEVEFLSFMLGEEHYALDIMSVKEIRGYESVTKIANAPSFIKGVINLRGDIVPIVDLRMKFAVGAVTYNEF TIVIMLNVFERIVGIVVDAVSDVIKLSAEEILPAPEFGVAFDSRYLKGLATVEDKMVILVNIQALISSDELGLIDANSLT DQEQ
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. It physically bridges CheA to the MCPs (methyl-accepting chemotaxis proteins) to allow regulated phosphotransfer to CheY and CheB [H]
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cheW-like domain [H]
Homologues:
Organism=Escherichia coli, GI1788196, Length=144, Percent_Identity=59.7222222222222, Blast_Score=182, Evalue=1e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002545 [H]
Pfam domain/function: PF01584 CheW [H]
EC number: NA
Molecular weight: Translated: 18259; Mature: 18128
Theoretical pI: Translated: 4.17; Mature: 4.17
Prosite motif: PS50851 CHEW
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAKVEYNSHDEVEFLSFMLGEEHYALDIMSVKEIRGYESVTKIANAPSFIKGVINLRGD CCEEECCCCCCHHHHHHHHHCCCCEEEEHHHHHHHCCHHHHHHHHCCHHHHHHHHHCCCC IVPIVDLRMKFAVGAVTYNEFTIVIMLNVFERIVGIVVDAVSDVIKLSAEEILPAPEFGV EEEHHHHHHHHHEEEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC AFDSRYLKGLATVEDKMVILVNIQALISSDELGLIDANSLTDQEQ HHHHHHHHHHHCCCCCEEEEEEEEHHHCCCCCCEEECCCCCCCCC >Mature Secondary Structure TAKVEYNSHDEVEFLSFMLGEEHYALDIMSVKEIRGYESVTKIANAPSFIKGVINLRGD CEEECCCCCCHHHHHHHHHCCCCEEEEHHHHHHHCCHHHHHHHHCCHHHHHHHHHCCCC IVPIVDLRMKFAVGAVTYNEFTIVIMLNVFERIVGIVVDAVSDVIKLSAEEILPAPEFGV EEEHHHHHHHHHEEEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC AFDSRYLKGLATVEDKMVILVNIQALISSDELGLIDANSLTDQEQ HHHHHHHHHHHCCCCCEEEEEEEEHHHCCCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]