| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875453
Identifier: 160875453
GI number: 160875453
Start: 2759860
End: 2761029
Strand: Reverse
Name: 160875453
Synonym: Sbal195_2341
Alternate gene names: NA
Gene position: 2761029-2759860 (Counterclockwise)
Preceding gene: 160875456
Following gene: 160875452
Centisome position: 51.63
GC content: 44.96
Gene sequence:
>1170_bases ATGGCGAAGATCAGTAACCGGTTCTGGTTTATGTTGCACGGTTGGGTGTCGCTCCCAATATGGTTGTTATTTTGTTTTAT CTGTTTGACGGGCACGATTGCGGTATTAAGTCATGAGATCACTTGGCTCACGAATCCTGCATCCAGAGCATTGAATCCTA ATGATTTACCGGAGAAACCAGTCAGCGAGTTGATGACAATTGTTGAGACAGCCTACCCAAGTGCGGCGGTTACTGGCGCT ATGACTTTAGAGCCATATTTGGTGAATGTGGTGATGTTCAGTGATGCGGATAAGCCCTTTGCCATGGCCTATGTGAATCA ATACACAGGTGAGATCCAACAGATCAATGAAGGTATGACCTTTGTGGGCTTTATCAGATCGTTACATGCATGGTTACTAT TTCCCTGGCAAAGCAGTTACAGCCTTGGCTATTACCTCGTATGTTCGATGGCGCTGTTCATGCTCGCGTCTTTAGTCACT GGATTGATTGTCTATAAACGTTTTTGGCGGAGTTTATTTGCACCTAAGCTGCGACTCAATCAAGGGAAAAAGACGTTACT AGCAGATTTACATAAATTGTCCGGTGTTTGGTCTATTTGGTTTATCGCCATCATGGCCGTGACAGGATTATGGTATCTAG TCCAAGCCATTTTTTGGCATGCAGATATTGATATTGAACCCCATGCGCCATTAGTCGCGGCTGAACAATTGCCCTTCGTC CAAAAGAGTGACATGAAGCCAGCAGTGCCGAACGTGTCACTTACACAAGCCCTAACGTTAGCGCAAACACGCTTTCCAAA TTTTCAGCCAAGTTATGTGATGCAACCAGAGCACAATCGAGGCATGTATCATCTGAGCGGTAGCGGCGATCATATTTTCT ACGATCAGTATTCATACAACCTCAGTATTAATCCTTGGACAGGGGAGGTTGCCAGTGCCACATCACCCGAGACGATGACG GGCATGCAAACCCTAATGCATATCGCAGATCCCTTACATTACGGCACCTTAGGCGGCATTTGGACAAAAATCATTTGGTT TATTTTTGGGTTAATTCTATCGGGTATGTCAATTACAGGATTTATGATGTGGGGATTACGCAATCTGCGGGCATTTAAAA ATGCAAGCGTTGCAAACACTGCGACTGACCTGTTAGAGGAGGGATATTAA
Upstream 100 bases:
>100_bases CCGGCATTCTAATTGAAAACAATTACCGGTACATCGTATTGATAACAATTTGCATTACCTTTACACTCTCGGCATTAGAT AAGTGTTAGGAAAGTCACAA
Downstream 100 bases:
>100_bases TGGCTGTCACAGACTCAAGCTTTTGGCTAAAAAACAAATATAAACTCAGTGGGTTAATTCTACTCCTACCGCTATTGTTT CTATATCAGTCGTTAACACC
Product: PepSY-associated TM helix domain-containing protein
Products: NA
Alternate protein names: PepSY-Associated TM Helix Domain-Containing Protein; PepSY-Associated TM Helix; PepSY-Associated TM Helix Domain Protein; Peptidase; PepSY-Associated TM Helix Family; Membrane-Bound Protein; PepSY-Associated Membrane Protein; Transmembrane Protein; NB-Dependent Receptor Plug; Cytoplasmic Membrane Protein; PepSY-Associated TM Helix Family Protein; Aspartate Kinase; Rare Lipoprotein B; Amino Acid Carrier Family Protein; Iron-Regulated Transmembrane Protein; Sulfite Reductase Flavoprotein Component
Number of amino acids: Translated: 389; Mature: 388
Protein sequence:
>389_residues MAKISNRFWFMLHGWVSLPIWLLFCFICLTGTIAVLSHEITWLTNPASRALNPNDLPEKPVSELMTIVETAYPSAAVTGA MTLEPYLVNVVMFSDADKPFAMAYVNQYTGEIQQINEGMTFVGFIRSLHAWLLFPWQSSYSLGYYLVCSMALFMLASLVT GLIVYKRFWRSLFAPKLRLNQGKKTLLADLHKLSGVWSIWFIAIMAVTGLWYLVQAIFWHADIDIEPHAPLVAAEQLPFV QKSDMKPAVPNVSLTQALTLAQTRFPNFQPSYVMQPEHNRGMYHLSGSGDHIFYDQYSYNLSINPWTGEVASATSPETMT GMQTLMHIADPLHYGTLGGIWTKIIWFIFGLILSGMSITGFMMWGLRNLRAFKNASVANTATDLLEEGY
Sequences:
>Translated_389_residues MAKISNRFWFMLHGWVSLPIWLLFCFICLTGTIAVLSHEITWLTNPASRALNPNDLPEKPVSELMTIVETAYPSAAVTGA MTLEPYLVNVVMFSDADKPFAMAYVNQYTGEIQQINEGMTFVGFIRSLHAWLLFPWQSSYSLGYYLVCSMALFMLASLVT GLIVYKRFWRSLFAPKLRLNQGKKTLLADLHKLSGVWSIWFIAIMAVTGLWYLVQAIFWHADIDIEPHAPLVAAEQLPFV QKSDMKPAVPNVSLTQALTLAQTRFPNFQPSYVMQPEHNRGMYHLSGSGDHIFYDQYSYNLSINPWTGEVASATSPETMT GMQTLMHIADPLHYGTLGGIWTKIIWFIFGLILSGMSITGFMMWGLRNLRAFKNASVANTATDLLEEGY >Mature_388_residues AKISNRFWFMLHGWVSLPIWLLFCFICLTGTIAVLSHEITWLTNPASRALNPNDLPEKPVSELMTIVETAYPSAAVTGAM TLEPYLVNVVMFSDADKPFAMAYVNQYTGEIQQINEGMTFVGFIRSLHAWLLFPWQSSYSLGYYLVCSMALFMLASLVTG LIVYKRFWRSLFAPKLRLNQGKKTLLADLHKLSGVWSIWFIAIMAVTGLWYLVQAIFWHADIDIEPHAPLVAAEQLPFVQ KSDMKPAVPNVSLTQALTLAQTRFPNFQPSYVMQPEHNRGMYHLSGSGDHIFYDQYSYNLSINPWTGEVASATSPETMTG MQTLMHIADPLHYGTLGGIWTKIIWFIFGLILSGMSITGFMMWGLRNLRAFKNASVANTATDLLEEGY
Specific function: Unknown
COG id: COG3182
COG function: function code S; Uncharacterized iron-regulated membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43900; Mature: 43768
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKISNRFWFMLHGWVSLPIWLLFCFICLTGTIAVLSHEITWLTNPASRALNPNDLPEKP CCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHCCCCCCCCCHH VSELMTIVETAYPSAAVTGAMTLEPYLVNVVMFSDADKPFAMAYVNQYTGEIQQINEGMT HHHHHHHHHHCCCCHHHCCCEEECCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCH FVGFIRSLHAWLLFPWQSSYSLGYYLVCSMALFMLASLVTGLIVYKRFWRSLFAPKLRLN HHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHC QGKKTLLADLHKLSGVWSIWFIAIMAVTGLWYLVQAIFWHADIDIEPHAPLVAAEQLPFV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCC QKSDMKPAVPNVSLTQALTLAQTRFPNFQPSYVMQPEHNRGMYHLSGSGDHIFYDQYSYN CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCEEEECCCCCEEEEEEEEEE LSINPWTGEVASATSPETMTGMQTLMHIADPLHYGTLGGIWTKIIWFIFGLILSGMSITG EEECCCCCCCCCCCCCHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHCCCHHHH FMMWGLRNLRAFKNASVANTATDLLEEGY HHHHHHHHHHHHHCCCHHHHHHHHHHCCC >Mature Secondary Structure AKISNRFWFMLHGWVSLPIWLLFCFICLTGTIAVLSHEITWLTNPASRALNPNDLPEKP CCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHCCCCCCCCCHH VSELMTIVETAYPSAAVTGAMTLEPYLVNVVMFSDADKPFAMAYVNQYTGEIQQINEGMT HHHHHHHHHHCCCCHHHCCCEEECCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCH FVGFIRSLHAWLLFPWQSSYSLGYYLVCSMALFMLASLVTGLIVYKRFWRSLFAPKLRLN HHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHC QGKKTLLADLHKLSGVWSIWFIAIMAVTGLWYLVQAIFWHADIDIEPHAPLVAAEQLPFV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCC QKSDMKPAVPNVSLTQALTLAQTRFPNFQPSYVMQPEHNRGMYHLSGSGDHIFYDQYSYN CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCEEEECCCCCEEEEEEEEEE LSINPWTGEVASATSPETMTGMQTLMHIADPLHYGTLGGIWTKIIWFIFGLILSGMSITG EEECCCCCCCCCCCCCHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHCCCHHHH FMMWGLRNLRAFKNASVANTATDLLEEGY HHHHHHHHHHHHHCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA