| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is fhuE [H]
Identifier: 160875451
GI number: 160875451
Start: 2756917
End: 2759085
Strand: Reverse
Name: fhuE [H]
Synonym: Sbal195_2339
Alternate gene names: 160875451
Gene position: 2759085-2756917 (Counterclockwise)
Preceding gene: 160875452
Following gene: 160875450
Centisome position: 51.6
GC content: 44.58
Gene sequence:
>2169_bases ATGCAATTTAATTTACTTCCTCTTGCGGCGGCTGTTGCTTTGGCCTTAAACCCTTTACTGGTTTTAGCGGAGGAGCAGTC ACCTCCTGATCTACAAGATCAGAATATTGAAAAAATCACTGTGATGGGTAAATACACTGTCAGCAAGACTATCGATACCG CCACTGGGCTTGGATTGTCGTTGATGGAAACGCCGCAGTCAGTGTCGATTTTAACGGCTGAGCGAATTCAAGATCAGGCG CTTAATACTGTCGTTGATGTCGTTAATAATGCAGTCGGTTTATCGTCATCTAAAACTGACAACGTGCGTAATGGTTTCAA TGCTCGCGGATTTTCAGTGCAAAATTACCAGATTGACGGTGTACCTTTATCTTGGAGTTTAGGTGGTGATGCCGGCGAAA CCGTTTCTGATGTATCCCTTTATGAACGAGTTGAAGTGGTGCGAGGGGCAACAGGCTTACTCACAGGTGCCGGTGATCCG TCTGCTTCGATTAATTTGGTACGCAAACATGCCGATAGCAGCGACCTGAAGGGTTATGTCGATGTAGCAACGGGCAGTTG GGATAAAAAACAGATCACCGCAGATGTCTCCAATGGCCTCAATGAAAGTGGTAGTGTACGTGGTCGCATGGTCGCTAAAT ACGTCAATAGCGATTCATACCAAGAGCTTTATCAAGACCGCAAAACCATTCTTTACGGTGTTATCGATACTGATATCACA GATAACACTATGTTGCGCGTGGGGGGCAGTTACAACAACAATAACCCTAAAGGCGCCATGTGGGGAGCATTGCAAGCCGT ATACAGCAATGGCACTCCTACCGATTGGGATGTTTCTGCTACAACGGCAGCAGATTGGAGTCGCTGGGAAACCACCAACG TAAACTACTTTGCAAACCTCAATCATTATTTCAACAATGGCTGGCAATTGGTGGCGAACTACAACCGTATGGAGTATGAA ACCACCACTAAAATGATCTACATGTCTGGTTTGCTTGATAAAGAAACGGGGGCAGGATTGAGTGGTCAGCGTTATCACAG CCACGGTGAGAGCAACTCTGATAATTTCGATTTGCAGCTGAAAGGGGATTATCAACTGTTCAATCTGGAACATGAGTTTG TCGTCGGTGCCTTATACAGTAAACAAAAATCCTATACGGATACTTTCGAACCCATTCGCGATAACATGAGCGGTTACGAT AACAAGCCCGTAGATAACTTTTACGAATGGCAAAACAATGCATTTGCAGAGCCTGAATGGTCAACGGACGCCAATCGCCA GCTTAAAATGGACACTGAGCAGAAAGGTTTTTACGCTGCAACCCGTTTCACCATTACTGAAGCCTTAAAAATCATTGCTG GCGGCCGGATTTCGAGCTGGAATCGTGAAGGAGTGAGCTACGGCACTGATACCAACTTTGGTGATGATGGGGTGTTTGTA CCTTATGTCGGTGCCTTATATGACATTAGTGAGCAACATCGTGCCTACGCGAGTTATACCGAAATATTTAATCCGCAAAA TGTGACTAATGCTTATGGAGAGTATCTCGACCCGTTAAAAGGTAAAGCTTATGAAATTGGTCTGAAGAGTGCTTATCTTG ACGATCGTCTGCACACAACTGTCGCGCTATTTAAAATCGATCAAGACAATCTAGCAACGCCGGATGGAACTGTCATCATT GATGGCAAACCCGTTACTAATTACAAAGCTGCTCAAGGTACTGAAAGTACAGGTTTCGAGTTAGAAGTGGTGGGTGAGTT TATTGATGGTTGGAATATCACGGCTGGCTATTCTCAGTTTACAGCGGAAGATGTGGAAGGAAACAGGATGGCAACCACAA GCCCACGTAAACAGTTTAAGCTATTTACCACGTATCAGTTTGTCGATTATGTGCCTGAGTTAACCGTGGGTGGTGGTATT AATTGGCAAAGTGACAGTTACTCTGAAGGCGGCACAGTAAAAATAGATCAGGAAGCTTACTCCCTAGTTAACCTGATGGC CCGTTATAACCTCGCCGATAATATGGATCTGCAACTTAACGTGGAGAATTTATTAGACGAAAAATACTACGCTTATATGT CAGCCTCATCCTCAATGTCCGAAGCTTATAGCGTGTATCACTATGGCACGCCACGTAATGTGACCTTGAGTTTTAATTAC CGCTTTTAA
Upstream 100 bases:
>100_bases GTCAATAGCAAATATGTTATCTGAATCACCAAAATACAAATGAAAGTGATTCGCAATAGTGTTACCGTATTGCCACTCTA AATAAACTATCCAACTAACT
Downstream 100 bases:
>100_bases GTTTTCCGCTAAACAGGGTAGCCGAGTGATCGGCTACTTCTCCTGCATATTCTATTATTGCTAATGTTTTAATTGCTCGT GCTAGTTCGTATTAACGACT
Product: TonB-dependent siderophore receptor
Products: NA
Alternate protein names: Outer-membrane receptor for Fe(III)-coprogen, Fe(III)-ferrioxamine B and Fe(III)-rhodotrulic acid [H]
Number of amino acids: Translated: 722; Mature: 722
Protein sequence:
>722_residues MQFNLLPLAAAVALALNPLLVLAEEQSPPDLQDQNIEKITVMGKYTVSKTIDTATGLGLSLMETPQSVSILTAERIQDQA LNTVVDVVNNAVGLSSSKTDNVRNGFNARGFSVQNYQIDGVPLSWSLGGDAGETVSDVSLYERVEVVRGATGLLTGAGDP SASINLVRKHADSSDLKGYVDVATGSWDKKQITADVSNGLNESGSVRGRMVAKYVNSDSYQELYQDRKTILYGVIDTDIT DNTMLRVGGSYNNNNPKGAMWGALQAVYSNGTPTDWDVSATTAADWSRWETTNVNYFANLNHYFNNGWQLVANYNRMEYE TTTKMIYMSGLLDKETGAGLSGQRYHSHGESNSDNFDLQLKGDYQLFNLEHEFVVGALYSKQKSYTDTFEPIRDNMSGYD NKPVDNFYEWQNNAFAEPEWSTDANRQLKMDTEQKGFYAATRFTITEALKIIAGGRISSWNREGVSYGTDTNFGDDGVFV PYVGALYDISEQHRAYASYTEIFNPQNVTNAYGEYLDPLKGKAYEIGLKSAYLDDRLHTTVALFKIDQDNLATPDGTVII DGKPVTNYKAAQGTESTGFELEVVGEFIDGWNITAGYSQFTAEDVEGNRMATTSPRKQFKLFTTYQFVDYVPELTVGGGI NWQSDSYSEGGTVKIDQEAYSLVNLMARYNLADNMDLQLNVENLLDEKYYAYMSASSSMSEAYSVYHYGTPRNVTLSFNY RF
Sequences:
>Translated_722_residues MQFNLLPLAAAVALALNPLLVLAEEQSPPDLQDQNIEKITVMGKYTVSKTIDTATGLGLSLMETPQSVSILTAERIQDQA LNTVVDVVNNAVGLSSSKTDNVRNGFNARGFSVQNYQIDGVPLSWSLGGDAGETVSDVSLYERVEVVRGATGLLTGAGDP SASINLVRKHADSSDLKGYVDVATGSWDKKQITADVSNGLNESGSVRGRMVAKYVNSDSYQELYQDRKTILYGVIDTDIT DNTMLRVGGSYNNNNPKGAMWGALQAVYSNGTPTDWDVSATTAADWSRWETTNVNYFANLNHYFNNGWQLVANYNRMEYE TTTKMIYMSGLLDKETGAGLSGQRYHSHGESNSDNFDLQLKGDYQLFNLEHEFVVGALYSKQKSYTDTFEPIRDNMSGYD NKPVDNFYEWQNNAFAEPEWSTDANRQLKMDTEQKGFYAATRFTITEALKIIAGGRISSWNREGVSYGTDTNFGDDGVFV PYVGALYDISEQHRAYASYTEIFNPQNVTNAYGEYLDPLKGKAYEIGLKSAYLDDRLHTTVALFKIDQDNLATPDGTVII DGKPVTNYKAAQGTESTGFELEVVGEFIDGWNITAGYSQFTAEDVEGNRMATTSPRKQFKLFTTYQFVDYVPELTVGGGI NWQSDSYSEGGTVKIDQEAYSLVNLMARYNLADNMDLQLNVENLLDEKYYAYMSASSSMSEAYSVYHYGTPRNVTLSFNY RF >Mature_722_residues MQFNLLPLAAAVALALNPLLVLAEEQSPPDLQDQNIEKITVMGKYTVSKTIDTATGLGLSLMETPQSVSILTAERIQDQA LNTVVDVVNNAVGLSSSKTDNVRNGFNARGFSVQNYQIDGVPLSWSLGGDAGETVSDVSLYERVEVVRGATGLLTGAGDP SASINLVRKHADSSDLKGYVDVATGSWDKKQITADVSNGLNESGSVRGRMVAKYVNSDSYQELYQDRKTILYGVIDTDIT DNTMLRVGGSYNNNNPKGAMWGALQAVYSNGTPTDWDVSATTAADWSRWETTNVNYFANLNHYFNNGWQLVANYNRMEYE TTTKMIYMSGLLDKETGAGLSGQRYHSHGESNSDNFDLQLKGDYQLFNLEHEFVVGALYSKQKSYTDTFEPIRDNMSGYD NKPVDNFYEWQNNAFAEPEWSTDANRQLKMDTEQKGFYAATRFTITEALKIIAGGRISSWNREGVSYGTDTNFGDDGVFV PYVGALYDISEQHRAYASYTEIFNPQNVTNAYGEYLDPLKGKAYEIGLKSAYLDDRLHTTVALFKIDQDNLATPDGTVII DGKPVTNYKAAQGTESTGFELEVVGEFIDGWNITAGYSQFTAEDVEGNRMATTSPRKQFKLFTTYQFVDYVPELTVGGGI NWQSDSYSEGGTVKIDQEAYSLVNLMARYNLADNMDLQLNVENLLDEKYYAYMSASSSMSEAYSVYHYGTPRNVTLSFNY RF
Specific function: Required for the uptake of Fe(3+) via coprogen, ferrioxamine B, and rhodotorulic acid [H]
COG id: COG4773
COG function: function code P; Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1787344, Length=735, Percent_Identity=36.1904761904762, Blast_Score=449, Evalue=1e-127, Organism=Escherichia coli, GI1786344, Length=722, Percent_Identity=24.9307479224377, Blast_Score=110, Evalue=4e-25, Organism=Escherichia coli, GI1787024, Length=264, Percent_Identity=29.9242424242424, Blast_Score=80, Evalue=6e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 80133; Mature: 80133
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFNLLPLAAAVALALNPLLVLAEEQSPPDLQDQNIEKITVMGKYTVSKTIDTATGLGLS CCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEEEEEEEEEHHHHHHHCCCCEE LMETPQSVSILTAERIQDQALNTVVDVVNNAVGLSSSKTDNVRNGFNARGFSVQNYQIDG ECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCEEEECEEECC VPLSWSLGGDAGETVSDVSLYERVEVVRGATGLLTGAGDPSASINLVRKHADSSDLKGYV EEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHEEECCCCCCCCEEE DVATGSWDKKQITADVSNGLNESGSVRGRMVAKYVNSDSYQELYQDRKTILYGVIDTDIT EEECCCCCCCEEEEHHHCCCCCCCCCCCEEEEEHHCCCHHHHHHHCCCEEEEEEEECCCC DNTMLRVGGSYNNNNPKGAMWGALQAVYSNGTPTDWDVSATTAADWSRWETTNVNYFANL CCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCEEEEEC NHYFNNGWQLVANYNRMEYETTTKMIYMSGLLDKETGAGLSGQRYHSHGESNSDNFDLQL CHHHCCCEEEEEECCCEEEEHHHEEEEEECCCCCCCCCCCCCCHHHCCCCCCCCCEEEEE KGDYQLFNLEHEFVVGALYSKQKSYTDTFEPIRDNMSGYDNKPVDNFYEWQNNAFAEPEW ECCEEEEECCHHHEEEEHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCC STDANRQLKMDTEQKGFYAATRFTITEALKIIAGGRISSWNREGVSYGTDTNFGDDGVFV CCCCCCEEEECCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEC PYVGALYDISEQHRAYASYTEIFNPQNVTNAYGEYLDPLKGKAYEIGLKSAYLDDRLHTT CCHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEECCHHHHCCHHEEE VALFKIDQDNLATPDGTVIIDGKPVTNYKAAQGTESTGFELEVVGEFIDGWNITAGYSQF EEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEEHHHCCCCEECCCCCC TAEDVEGNRMATTSPRKQFKLFTTYQFVDYVPELTVGGGINWQSDSYSEGGTVKIDQEAY CCCCCCCCEEECCCCHHHEEEEEEHHHHHHCCCEEECCCCCCCCCCCCCCCCEEECHHHH SLVNLMARYNLADNMDLQLNVENLLDEKYYAYMSASSSMSEAYSVYHYGTPRNVTLSFNY HHHHHHHHCCCCCCCEEEEEHHHHHCCHHHEEEECCCCHHHHEEEEEECCCCEEEEEEEE RF CC >Mature Secondary Structure MQFNLLPLAAAVALALNPLLVLAEEQSPPDLQDQNIEKITVMGKYTVSKTIDTATGLGLS CCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEEEEEEEEEHHHHHHHCCCCEE LMETPQSVSILTAERIQDQALNTVVDVVNNAVGLSSSKTDNVRNGFNARGFSVQNYQIDG ECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCEEEECEEECC VPLSWSLGGDAGETVSDVSLYERVEVVRGATGLLTGAGDPSASINLVRKHADSSDLKGYV EEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHEEECCCCCCCCEEE DVATGSWDKKQITADVSNGLNESGSVRGRMVAKYVNSDSYQELYQDRKTILYGVIDTDIT EEECCCCCCCEEEEHHHCCCCCCCCCCCEEEEEHHCCCHHHHHHHCCCEEEEEEEECCCC DNTMLRVGGSYNNNNPKGAMWGALQAVYSNGTPTDWDVSATTAADWSRWETTNVNYFANL CCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCEEEEEC NHYFNNGWQLVANYNRMEYETTTKMIYMSGLLDKETGAGLSGQRYHSHGESNSDNFDLQL CHHHCCCEEEEEECCCEEEEHHHEEEEEECCCCCCCCCCCCCCHHHCCCCCCCCCEEEEE KGDYQLFNLEHEFVVGALYSKQKSYTDTFEPIRDNMSGYDNKPVDNFYEWQNNAFAEPEW ECCEEEEECCHHHEEEEHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCC STDANRQLKMDTEQKGFYAATRFTITEALKIIAGGRISSWNREGVSYGTDTNFGDDGVFV CCCCCCEEEECCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEC PYVGALYDISEQHRAYASYTEIFNPQNVTNAYGEYLDPLKGKAYEIGLKSAYLDDRLHTT CCHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEECCHHHHCCHHEEE VALFKIDQDNLATPDGTVIIDGKPVTNYKAAQGTESTGFELEVVGEFIDGWNITAGYSQF EEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEEHHHCCCCEECCCCCC TAEDVEGNRMATTSPRKQFKLFTTYQFVDYVPELTVGGGINWQSDSYSEGGTVKIDQEAY CCCCCCCCEEECCCCHHHEEEEEEHHHHHHCCCEEECCCCCCCCCCCCCCCCEEECHHHH SLVNLMARYNLADNMDLQLNVENLLDEKYYAYMSASSSMSEAYSVYHYGTPRNVTLSFNY HHHHHHHHCCCCCCCEEEEEHHHHHCCHHHEEEECCCCHHHHEEEEEECCCCEEEEEEEE RF CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2162465; 8905232; 9278503; 3032906 [H]