| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is rec2 [H]
Identifier: 160874821
GI number: 160874821
Start: 2050223
End: 2052574
Strand: Direct
Name: rec2 [H]
Synonym: Sbal195_1704
Alternate gene names: 160874821
Gene position: 2050223-2052574 (Clockwise)
Preceding gene: 160874814
Following gene: 160874822
Centisome position: 38.34
GC content: 48.04
Gene sequence:
>2352_bases ATGAATCGATTCATGTTTGGCTTTAGTGCCATCTTGTTATCAGCGATGTTGTGGCCTTCGCTGCCGCCAGTCAGTTATAT ACCCTACCTTGTTGTTGGGGCGTTAATTTTATACCGAAAAATCCCTGTCTGCGCAGGTGGACTCTTTGCAATGGCATGGC TAACTGGTTTTTGCTTAGGATTATCTAGGCAGGATCTTCCAGTGTTACAACAACCTATACAGGTTAGGGGCGAAATCATA TCACTAGTTAGTCGAAACAGCGACTGGCTAAGTTTGGATATATCGGTCATTAAACCAAATTTAATCTTAGGGCCAAATGC AAAATTGCGACTCACGTGGAAAGATCCGCCAGAAGTCGATGTCGGTCAGGTTTGGCAGTTTACCTTGATGCCTAAGCGTA TTGCTAGCGTGTTAAATCAAGGTGGCTACAACGAGCAGAAACAATTAATCAGCCAACATGTTGTCGGTAAAGGGCGAGTG ATAGAGGCGCAGTTACTTGCGTTTTCACCTTCACTGCGTAACAAGCTGATAAGCACATTGACGCCTGAATTAGTCTCTTT GCCGCAAGGTGATATTCTACTCGCCTTACTTTTGGGTGATAAGCAGTTGATCTCAAAAGTGCGTTGGCAAGCATTACGAC AGACAGGTACGGGTCATTTAGTGGCGATATCTGGCTTGCATCTTTCGGTCATAGCAGCATGGATTTACACATACCTTTTG TTTGGCTTAAGTCGCTTAGTGCCACATCAGAGTCGGCGTAATATCACCCTTGCCTTAGTCGCAGCGGGCATAGGCGCCGT ATTTTATGCCTATCTTGCTGGCTTTGGCATTTCGACGCAGCGTGCATTAGTGATGATTCTGCTGTTAATGCTGTTGAGTC TATTAAAGCGCTTTTCTACGGCGTGGGAGCGCTTATTATTCGCCCTGTTCATTGTATTGCTGCTTGATCCGCTCGCTTGT TTAAGTGCGGGGTTTTGGCTGTCGTTTTGTGCTTTAGGCATCATCTTATACACCTTAGAAATCCAACCAAGGGAATTTAC CCCCGCGTCGACTCGAAGGGCGCGTTTACGCACAGGGATGATGCAGTTTTGGGCTATCCAATGGCGCTTAAGTCTCGGGC TTGGATTATTGCAAGCGGCACTCTTTGGCGGCGTGAGCGTACACAGTCTGTGGATGAACATCTTGGCCGTGCCTTGGTTT AGCTTTGTCGTGATCCCCTTAGCCATGGCGGGATTTGTCTGCTGGTGGCTTGGGACGGCTTTGGGATTATCTCACTTCGG ACTCTCTTCGCTTGGAGTACTGCGTCTCAGTGATTGGAGTTTATCGCCCTATGCGCAGTTGCTCGACATCAGCCGGCAAT TACCCGCCCATTGGTTAGCACTCTCTGACAGCCTATTAGCCTTAGGATTCTGCGCGCTCGTTGGTGGTGTGTTATGGCGC TATGTGCCTAAGCATAAACACTATATTGCTTGGTTAAGCCTCTTGAGTTTGCTGTTTATGCCTGCGTTACTTTTTTGTAT GACGCTATGGTCTCCCGTTCAAACCCATCGATGGACCATGCATTTACTTGATGTGGGCCAAGGTTTAGCCGTGGTGATTG AAAAGAATGGCAAGGGGTTTATCTATGACACGGGCGCCGCCTTTGGTGATGATTTCAGTTATGCGGAGCGGGTGATATTG CCCTTTTTAAAAGCCAAAGGCATCCAAGAGATTAATTATATTGTTGTCAGCCATAGCGATAACGATCATGCTGGCGGTGC GCCTGTCTTGATGGAGGCTTATCCCAAGGCATTGGTGATCACTGATGTGGCAGGCTTTAGCGGCCAAGATTGCCGCCCAA GGCAGATTCAATGGCAAGGATTGCGCCTTAACTTACTCTCGCCGCCTCAAGTGCTGGCGGGCAATAATGGCTCTTGTGTG GTGCGCATTGATGATGGCCTGCAGAGTCTGCTGCTCACCGGGGACATTGAAAAACAAACCGAAGCGGCACTATTACGTAG TGAGTTAAGTGTGAGCGGTGATCTAAGTGACCTAAACGAGTTACAAAGCGACGTGCTGGTAGCGCCGCACCATGGCAGTA AAACCTCGTCGACTGAGGACTTTATCGATGCCGTTGCCCCTAAGTTAGTGCTGTTTCCGGCGGGTTTTGCTAATCGCTAT GGTTTTCCAAAAACCACAGTGGTTGAGCGGTATCAGCGACGAGAGATTAGGAGCCTGACCACAGGGACAGAAGGGCAGAT TAGTGTGATTTTTCAGCAGTCTGAGTTAGAGGTAAAGACCTATCGTGGTGATTTAGCGCCATTTTGGTACAACTCTCTGT TTAGATTTGGTGACTTGATTAATCCAGAGTAG
Upstream 100 bases:
>100_bases CGTAAGTGTTTATGCTCACGCAAGGTTTCAGGCTTAGGCATAAATCTTTTGATTAATTTTTTTGGCATAGGCTGAAATTG CTGTCTTAACTTAGTTCACT
Downstream 100 bases:
>100_bases AATGCCTACTTTGCCATAATTTAGTGTTATCAATGACAACATCTCCTAAAGACGAAATGTGGACAGTTTTCAAACGATTA CTGGGATATATAAAACAGAT
Product: DNA internalization-like competence protein ComEC/Rec2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 783; Mature: 783
Protein sequence:
>783_residues MNRFMFGFSAILLSAMLWPSLPPVSYIPYLVVGALILYRKIPVCAGGLFAMAWLTGFCLGLSRQDLPVLQQPIQVRGEII SLVSRNSDWLSLDISVIKPNLILGPNAKLRLTWKDPPEVDVGQVWQFTLMPKRIASVLNQGGYNEQKQLISQHVVGKGRV IEAQLLAFSPSLRNKLISTLTPELVSLPQGDILLALLLGDKQLISKVRWQALRQTGTGHLVAISGLHLSVIAAWIYTYLL FGLSRLVPHQSRRNITLALVAAGIGAVFYAYLAGFGISTQRALVMILLLMLLSLLKRFSTAWERLLFALFIVLLLDPLAC LSAGFWLSFCALGIILYTLEIQPREFTPASTRRARLRTGMMQFWAIQWRLSLGLGLLQAALFGGVSVHSLWMNILAVPWF SFVVIPLAMAGFVCWWLGTALGLSHFGLSSLGVLRLSDWSLSPYAQLLDISRQLPAHWLALSDSLLALGFCALVGGVLWR YVPKHKHYIAWLSLLSLLFMPALLFCMTLWSPVQTHRWTMHLLDVGQGLAVVIEKNGKGFIYDTGAAFGDDFSYAERVIL PFLKAKGIQEINYIVVSHSDNDHAGGAPVLMEAYPKALVITDVAGFSGQDCRPRQIQWQGLRLNLLSPPQVLAGNNGSCV VRIDDGLQSLLLTGDIEKQTEAALLRSELSVSGDLSDLNELQSDVLVAPHHGSKTSSTEDFIDAVAPKLVLFPAGFANRY GFPKTTVVERYQRREIRSLTTGTEGQISVIFQQSELEVKTYRGDLAPFWYNSLFRFGDLINPE
Sequences:
>Translated_783_residues MNRFMFGFSAILLSAMLWPSLPPVSYIPYLVVGALILYRKIPVCAGGLFAMAWLTGFCLGLSRQDLPVLQQPIQVRGEII SLVSRNSDWLSLDISVIKPNLILGPNAKLRLTWKDPPEVDVGQVWQFTLMPKRIASVLNQGGYNEQKQLISQHVVGKGRV IEAQLLAFSPSLRNKLISTLTPELVSLPQGDILLALLLGDKQLISKVRWQALRQTGTGHLVAISGLHLSVIAAWIYTYLL FGLSRLVPHQSRRNITLALVAAGIGAVFYAYLAGFGISTQRALVMILLLMLLSLLKRFSTAWERLLFALFIVLLLDPLAC LSAGFWLSFCALGIILYTLEIQPREFTPASTRRARLRTGMMQFWAIQWRLSLGLGLLQAALFGGVSVHSLWMNILAVPWF SFVVIPLAMAGFVCWWLGTALGLSHFGLSSLGVLRLSDWSLSPYAQLLDISRQLPAHWLALSDSLLALGFCALVGGVLWR YVPKHKHYIAWLSLLSLLFMPALLFCMTLWSPVQTHRWTMHLLDVGQGLAVVIEKNGKGFIYDTGAAFGDDFSYAERVIL PFLKAKGIQEINYIVVSHSDNDHAGGAPVLMEAYPKALVITDVAGFSGQDCRPRQIQWQGLRLNLLSPPQVLAGNNGSCV VRIDDGLQSLLLTGDIEKQTEAALLRSELSVSGDLSDLNELQSDVLVAPHHGSKTSSTEDFIDAVAPKLVLFPAGFANRY GFPKTTVVERYQRREIRSLTTGTEGQISVIFQQSELEVKTYRGDLAPFWYNSLFRFGDLINPE >Mature_783_residues MNRFMFGFSAILLSAMLWPSLPPVSYIPYLVVGALILYRKIPVCAGGLFAMAWLTGFCLGLSRQDLPVLQQPIQVRGEII SLVSRNSDWLSLDISVIKPNLILGPNAKLRLTWKDPPEVDVGQVWQFTLMPKRIASVLNQGGYNEQKQLISQHVVGKGRV IEAQLLAFSPSLRNKLISTLTPELVSLPQGDILLALLLGDKQLISKVRWQALRQTGTGHLVAISGLHLSVIAAWIYTYLL FGLSRLVPHQSRRNITLALVAAGIGAVFYAYLAGFGISTQRALVMILLLMLLSLLKRFSTAWERLLFALFIVLLLDPLAC LSAGFWLSFCALGIILYTLEIQPREFTPASTRRARLRTGMMQFWAIQWRLSLGLGLLQAALFGGVSVHSLWMNILAVPWF SFVVIPLAMAGFVCWWLGTALGLSHFGLSSLGVLRLSDWSLSPYAQLLDISRQLPAHWLALSDSLLALGFCALVGGVLWR YVPKHKHYIAWLSLLSLLFMPALLFCMTLWSPVQTHRWTMHLLDVGQGLAVVIEKNGKGFIYDTGAAFGDDFSYAERVIL PFLKAKGIQEINYIVVSHSDNDHAGGAPVLMEAYPKALVITDVAGFSGQDCRPRQIQWQGLRLNLLSPPQVLAGNNGSCV VRIDDGLQSLLLTGDIEKQTEAALLRSELSVSGDLSDLNELQSDVLVAPHHGSKTSSTEDFIDAVAPKLVLFPAGFANRY GFPKTTVVERYQRREIRSLTTGTEGQISVIFQQSELEVKTYRGDLAPFWYNSLFRFGDLINPE
Specific function: Might contribute to transformation as a member of a membrane-bound pore complex at the base of the transformasome. It could directly interact with transforming DNA during translocation indirectly by participating in the assembly of the pore [H]
COG id: COG2333
COG function: function code R; Predicted hydrolase (metallo-beta-lactamase superfamily)
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081801, Length=667, Percent_Identity=31.1844077961019, Blast_Score=278, Evalue=7e-76,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR004477 - InterPro: IPR004797 [H]
Pfam domain/function: PF03772 Competence; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 86739; Mature: 86739
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRFMFGFSAILLSAMLWPSLPPVSYIPYLVVGALILYRKIPVCAGGLFAMAWLTGFCLG CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC LSRQDLPVLQQPIQVRGEIISLVSRNSDWLSLDISVIKPNLILGPNAKLRLTWKDPPEVD CCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCEEECCCCEEEEEECCCCCCC VGQVWQFTLMPKRIASVLNQGGYNEQKQLISQHVVGKGRVIEAQLLAFSPSLRNKLISTL HHHEHEEEECHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEHHHHHCCHHHHHHHHHHC TPELVSLPQGDILLALLLGDKQLISKVRWQALRQTGTGHLVAISGLHLSVIAAWIYTYLL CHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHH FGLSRLVPHQSRRNITLALVAAGIGAVFYAYLAGFGISTQRALVMILLLMLLSLLKRFST HHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH AWERLLFALFIVLLLDPLACLSAGFWLSFCALGIILYTLEIQPREFTPASTRRARLRTGM HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHH MQFWAIQWRLSLGLGLLQAALFGGVSVHSLWMNILAVPWFSFVVIPLAMAGFVCWWLGTA HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGLSHFGLSSLGVLRLSDWSLSPYAQLLDISRQLPAHWLALSDSLLALGFCALVGGVLWR HHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH YVPKHKHYIAWLSLLSLLFMPALLFCMTLWSPVQTHRWTMHLLDVGQGLAVVIEKNGKGF HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEEEECCCCEEEEEEECCCEE IYDTGAAFGDDFSYAERVILPFLKAKGIQEINYIVVSHSDNDHAGGAPVLMEAYPKALVI EEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCHHHHHCCCEEEE TDVAGFSGQDCRPRQIQWQGLRLNLLSPPQVLAGNNGSCVVRIDDGLQSLLLTGDIEKQT EEECCCCCCCCCCCCEEECCEEEEECCCCCEEECCCCEEEEEECCCHHHHHHCCCCHHHH EAALLRSELSVSGDLSDLNELQSDVLVAPHHGSKTSSTEDFIDAVAPKLVLFPAGFANRY HHHHHHHHHCCCCCHHHHHHHHHCEEEECCCCCCCCCHHHHHHHHCCCEEEECCCHHHCC GFPKTTVVERYQRREIRSLTTGTEGQISVIFQQSELEVKTYRGDLAPFWYNSLFRFGDLI CCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEECCCCCCHHHHHHHHHHCCCC NPE CCC >Mature Secondary Structure MNRFMFGFSAILLSAMLWPSLPPVSYIPYLVVGALILYRKIPVCAGGLFAMAWLTGFCLG CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC LSRQDLPVLQQPIQVRGEIISLVSRNSDWLSLDISVIKPNLILGPNAKLRLTWKDPPEVD CCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCEEECCCCEEEEEECCCCCCC VGQVWQFTLMPKRIASVLNQGGYNEQKQLISQHVVGKGRVIEAQLLAFSPSLRNKLISTL HHHEHEEEECHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEHHHHHCCHHHHHHHHHHC TPELVSLPQGDILLALLLGDKQLISKVRWQALRQTGTGHLVAISGLHLSVIAAWIYTYLL CHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHH FGLSRLVPHQSRRNITLALVAAGIGAVFYAYLAGFGISTQRALVMILLLMLLSLLKRFST HHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH AWERLLFALFIVLLLDPLACLSAGFWLSFCALGIILYTLEIQPREFTPASTRRARLRTGM HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHH MQFWAIQWRLSLGLGLLQAALFGGVSVHSLWMNILAVPWFSFVVIPLAMAGFVCWWLGTA HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGLSHFGLSSLGVLRLSDWSLSPYAQLLDISRQLPAHWLALSDSLLALGFCALVGGVLWR HHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH YVPKHKHYIAWLSLLSLLFMPALLFCMTLWSPVQTHRWTMHLLDVGQGLAVVIEKNGKGF HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEEEECCCCEEEEEEECCCEE IYDTGAAFGDDFSYAERVILPFLKAKGIQEINYIVVSHSDNDHAGGAPVLMEAYPKALVI EEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCHHHHHCCCEEEE TDVAGFSGQDCRPRQIQWQGLRLNLLSPPQVLAGNNGSCVVRIDDGLQSLLLTGDIEKQT EEECCCCCCCCCCCCEEECCEEEEECCCCCEEECCCCEEEEEECCCHHHHHHCCCCHHHH EAALLRSELSVSGDLSDLNELQSDVLVAPHHGSKTSSTEDFIDAVAPKLVLFPAGFANRY HHHHHHHHHCCCCCHHHHHHHHHCEEEECCCCCCCCCHHHHHHHHCCCEEEECCCHHHCC GFPKTTVVERYQRREIRSLTTGTEGQISVIFQQSELEVKTYRGDLAPFWYNSLFRFGDLI CCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEECCCCCCHHHHHHHHHHCCCC NPE CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8063112; 7542800 [H]