Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

Click here to switch to the map view.

The map label for this gene is yibL [H]

Identifier: 160874806

GI number: 160874806

Start: 2037709

End: 2038065

Strand: Direct

Name: yibL [H]

Synonym: Sbal195_1689

Alternate gene names: 160874806

Gene position: 2037709-2038065 (Clockwise)

Preceding gene: 160874805

Following gene: 160874807

Centisome position: 38.11

GC content: 44.82

Gene sequence:

>357_bases
ATGAATTTAAAGCAAGAACTGCAGCAGCTTAACGATAAATTAGATAAATTTCGTCGTAAACTTGCTGCGGCTGAACAAAG
AGGCGATGACGTCATTATTGCCCAGTTCAAGCGCGAAATCGCTGCAGTCACTAAGCAAATCGGCAGTGTGAAAGGCCAAC
AAACCCGCTTATTGAATAAGCAAGGTTCAGATATCAAAGGTTTGTCTTTCCACCGCGCTTTGACTAAAGATGAACAAGCG
GACATGGGCAAACTGAAAAAGTCTGTCAAAGGTCTTGTGGTGATCCACCCTATGACGGCTATCGGCCGTGAAATGGGGCT
AAAGGAAGTCACTGGATACGCGCCCGCAAAATTTTAA

Upstream 100 bases:

>100_bases
ATCTGTAACTTGCTGCTATAATCTCAGGCCTTGACACAGATGCTAGCATAATCAGGCTAAGATTTTACTGTGGCTAACTT
AGGTAATTTAAGGTAACAGA

Downstream 100 bases:

>100_bases
TGTGGGTTAGGCTGTCACTGACACGAGATCGAGTGTCGATCACGTGTTTGTGCGCCTAGTACTTTATGCATAGCTTCGTT
TTAATCCATTCCTTCGTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MNLKQELQQLNDKLDKFRRKLAAAEQRGDDVIIAQFKREIAAVTKQIGSVKGQQTRLLNKQGSDIKGLSFHRALTKDEQA
DMGKLKKSVKGLVVIHPMTAIGREMGLKEVTGYAPAKF

Sequences:

>Translated_118_residues
MNLKQELQQLNDKLDKFRRKLAAAEQRGDDVIIAQFKREIAAVTKQIGSVKGQQTRLLNKQGSDIKGLSFHRALTKDEQA
DMGKLKKSVKGLVVIHPMTAIGREMGLKEVTGYAPAKF
>Mature_118_residues
MNLKQELQQLNDKLDKFRRKLAAAEQRGDDVIIAQFKREIAAVTKQIGSVKGQQTRLLNKQGSDIKGLSFHRALTKDEQA
DMGKLKKSVKGLVVIHPMTAIGREMGLKEVTGYAPAKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790030, Length=121, Percent_Identity=42.1487603305785, Blast_Score=100, Evalue=5e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021230 [H]

Pfam domain/function: PF10928 DUF2810 [H]

EC number: NA

Molecular weight: Translated: 13162; Mature: 13162

Theoretical pI: Translated: 10.80; Mature: 10.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLKQELQQLNDKLDKFRRKLAAAEQRGDDVIIAQFKREIAAVTKQIGSVKGQQTRLLNK
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHC
QGSDIKGLSFHRALTKDEQADMGKLKKSVKGLVVIHPMTAIGREMGLKEVTGYAPAKF
CCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCEEEECCHHHHHHHCCHHHHHCCCCCCC
>Mature Secondary Structure
MNLKQELQQLNDKLDKFRRKLAAAEQRGDDVIIAQFKREIAAVTKQIGSVKGQQTRLLNK
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHC
QGSDIKGLSFHRALTKDEQADMGKLKKSVKGLVVIHPMTAIGREMGLKEVTGYAPAKF
CCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCEEEECCHHHHHHHCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]