Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

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The map label for this gene is 160874725

Identifier: 160874725

GI number: 160874725

Start: 1938966

End: 1939664

Strand: Reverse

Name: 160874725

Synonym: Sbal195_1608

Alternate gene names: NA

Gene position: 1939664-1938966 (Counterclockwise)

Preceding gene: 160874726

Following gene: 160874724

Centisome position: 36.27

GC content: 49.93

Gene sequence:

>699_bases
ATGACAGCGCTGCTGACAAAAATTAACGCCTGTACTTTATGTCAGGCTGATTTGCCCTTAGCGCCCAAACCGATATTGCA
GGCCAGTAGCCAAGCGCGGATTTTGATTGCCGGCCAAGCTCCGGGCGTGAAAACGCACCATAAAGGCATCCCATTTGACG
ATGCCAGCGGTGAACGGCTGCGTACTTGGTTGAATGTCACCCGTGAGCAATTTTACGACCCTGCCCTTTTTGCCATTGTC
CCTATGGGATTTTGTTTTCCGGGCAGTATCGAAAAAAACGGTAAAAAGCAGGGTGATAAACCACCGCGCCCCGAATGCGC
CGCCACTTGGCATCAAGCCTTACTTGCGTTAATGCCACAAATTGAGCTAATCGTGATCCTCGGCCAATATGCCATCGATT
ATCATCTACCGCGTGAATCGTCCGTGGCCATAAACCTCACTTCGCCGCTCACTAAGCCTCAAACAACCCACATAAATGTA
TCGTCCAGCGCCAAAGCAAAAACCATCCCCAAACTGAAACCCATCACAGTGACCCAAGCGTGCGCGCAGTGGCAGCAATA
TTGGCCTAAATATTTTGTCTTACCGCACCCGAGCCCACGCAATAATCTCTGGCTTAAGCAGCATCCTGAGTTTGAACGCG
ATATGCTACCCAGATTAAGAATGCGTATTGCATCCCTGTTAAACCTTCAACCACTCTAG

Upstream 100 bases:

>100_bases
TGACCACTGACTAAGACAAATTTTGACTAAAACACATTGCACTAACGCGCCGGCGTCATCACCGCTAAGCGAAACGGTAT
CGCCGCCCAGTTCTGCATCA

Downstream 100 bases:

>100_bases
GCACTTATATGTATCTGCTTGATTCTGCCATCGCTAAACAGATTGTGAGTCGCACAATGAAAATCATTGGCCACAATATC
AATGTGATGAACGGCCAAGG

Product: phage SPO1 DNA polymerase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 231

Protein sequence:

>232_residues
MTALLTKINACTLCQADLPLAPKPILQASSQARILIAGQAPGVKTHHKGIPFDDASGERLRTWLNVTREQFYDPALFAIV
PMGFCFPGSIEKNGKKQGDKPPRPECAATWHQALLALMPQIELIVILGQYAIDYHLPRESSVAINLTSPLTKPQTTHINV
SSSAKAKTIPKLKPITVTQACAQWQQYWPKYFVLPHPSPRNNLWLKQHPEFERDMLPRLRMRIASLLNLQPL

Sequences:

>Translated_232_residues
MTALLTKINACTLCQADLPLAPKPILQASSQARILIAGQAPGVKTHHKGIPFDDASGERLRTWLNVTREQFYDPALFAIV
PMGFCFPGSIEKNGKKQGDKPPRPECAATWHQALLALMPQIELIVILGQYAIDYHLPRESSVAINLTSPLTKPQTTHINV
SSSAKAKTIPKLKPITVTQACAQWQQYWPKYFVLPHPSPRNNLWLKQHPEFERDMLPRLRMRIASLLNLQPL
>Mature_231_residues
TALLTKINACTLCQADLPLAPKPILQASSQARILIAGQAPGVKTHHKGIPFDDASGERLRTWLNVTREQFYDPALFAIVP
MGFCFPGSIEKNGKKQGDKPPRPECAATWHQALLALMPQIELIVILGQYAIDYHLPRESSVAINLTSPLTKPQTTHINVS
SSAKAKTIPKLKPITVTQACAQWQQYWPKYFVLPHPSPRNNLWLKQHPEFERDMLPRLRMRIASLLNLQPL

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005122 [H]

Pfam domain/function: PF03167 UDG [H]

EC number: NA

Molecular weight: Translated: 26010; Mature: 25879

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTALLTKINACTLCQADLPLAPKPILQASSQARILIAGQAPGVKTHHKGIPFDDASGERL
CCCHHHHCCCCEEEECCCCCCCCHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHH
RTWLNVTREQFYDPALFAIVPMGFCFPGSIEKNGKKQGDKPPRPECAATWHQALLALMPQ
HHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
IELIVILGQYAIDYHLPRESSVAINLTSPLTKPQTTHINVSSSAKAKTIPKLKPITVTQA
CEEEEEEECHHEEEECCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHH
CAQWQQYWPKYFVLPHPSPRNNLWLKQHPEFERDMLPRLRMRIASLLNLQPL
HHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TALLTKINACTLCQADLPLAPKPILQASSQARILIAGQAPGVKTHHKGIPFDDASGERL
CCHHHHCCCCEEEECCCCCCCCHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHH
RTWLNVTREQFYDPALFAIVPMGFCFPGSIEKNGKKQGDKPPRPECAATWHQALLALMPQ
HHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
IELIVILGQYAIDYHLPRESSVAINLTSPLTKPQTTHINVSSSAKAKTIPKLKPITVTQA
CEEEEEEECHHEEEECCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHH
CAQWQQYWPKYFVLPHPSPRNNLWLKQHPEFERDMLPRLRMRIASLLNLQPL
HHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]