| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is 160874719
Identifier: 160874719
GI number: 160874719
Start: 1929993
End: 1930949
Strand: Direct
Name: 160874719
Synonym: Sbal195_1602
Alternate gene names: NA
Gene position: 1929993-1930949 (Clockwise)
Preceding gene: 160874710
Following gene: 160874734
Centisome position: 36.09
GC content: 31.35
Gene sequence:
>957_bases ATGGATAAAAGTAGTGGTAGCGAAGTTAAAGACAGAATGGTTTGGCCTAAAGTAGTATATGAGATTTTCGTAAACAAGAG TGGTATTCATTTTTTCTATATAGCATCTATTTTAATTGCATTGTTGGTTGTGGTTATTAGTTATAAATTCTCTGAAAATA ATAATCTTGTTGCTTATATCTCATTTGCAGCAACAATCTCATCATTGATTTTAGCGACTTTTGCTATTTTTTATGCCGTT TATACAAACGGTGAGTTAGCTAAATCACTTTCAAATGTTAATGATGGGGCTGAAATCATTGGTAAGTCTTCAAAAGAGCT GAGGTCTTCAAGTGAAAATTTAAATGTGACCTCAAAAAACATTGGCGATTCAATGAATGATTTAATTAGGCGGATAGACG ATATCCCCAGATTTATTCATGAAAAAATTGAATTGGTAAACTCAAATGTCGAGAAAATCAGTAATAATCTAGAGTCATTT CAAGCTCCAAAATCTAATGTTGGCTCAAATAAAATAAATCTAGATAGTAATACTTCAGAATTCATCAGATCTTTGTCTGT TATCGTAAAAATTTACTCACTGGTTATATTGTTAAGTAATAAGTCAGGGAAATTTATTACTGAAGATATTGGTAATATTG ATGTTTTAGATGGAATTCTTGGTCTATTGACCACATCTTCTATTTTTAGCAGTTTAGGTTTAGCCGATGTCATTGTGAAT AAAAGAAGAGAAAAGAATACGCTAGTAGTTAGTAAGGTTTTGCCTGACTTTGAAAAAGCTGTTTTTGATGAGATTGAAAG GCGTTTCTTTACTGAGTCCGATGACATACAAAAGCTGCCTGACGTATATATACAAGATATTGTTGAAATTTTTAATTATT TTGATGAAGAGCCGCCGCAGCAATATAGTGCAATGTATAATTACTATGTTGCTACACTTACTGAAAATGTTGAGTAA
Upstream 100 bases:
>100_bases ATGAACTTAATCAATCCATCTAATAAAGTAAACAAGATGTTGCCTTGCGGTCTTCAAAGTTGTAATGTCATTGGCGTCAA TGGGTTATGAGGTTCTGGTG
Downstream 100 bases:
>100_bases TCATCATATTAGTACCCGTTAATGGGTACGCTTTTATCCCGCTCCAAATCCCTACTAAGCGCACTTAGCCAACGCAGTGA AGTGTTAACCCGCCGCAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MDKSSGSEVKDRMVWPKVVYEIFVNKSGIHFFYIASILIALLVVVISYKFSENNNLVAYISFAATISSLILATFAIFYAV YTNGELAKSLSNVNDGAEIIGKSSKELRSSSENLNVTSKNIGDSMNDLIRRIDDIPRFIHEKIELVNSNVEKISNNLESF QAPKSNVGSNKINLDSNTSEFIRSLSVIVKIYSLVILLSNKSGKFITEDIGNIDVLDGILGLLTTSSIFSSLGLADVIVN KRREKNTLVVSKVLPDFEKAVFDEIERRFFTESDDIQKLPDVYIQDIVEIFNYFDEEPPQQYSAMYNYYVATLTENVE
Sequences:
>Translated_318_residues MDKSSGSEVKDRMVWPKVVYEIFVNKSGIHFFYIASILIALLVVVISYKFSENNNLVAYISFAATISSLILATFAIFYAV YTNGELAKSLSNVNDGAEIIGKSSKELRSSSENLNVTSKNIGDSMNDLIRRIDDIPRFIHEKIELVNSNVEKISNNLESF QAPKSNVGSNKINLDSNTSEFIRSLSVIVKIYSLVILLSNKSGKFITEDIGNIDVLDGILGLLTTSSIFSSLGLADVIVN KRREKNTLVVSKVLPDFEKAVFDEIERRFFTESDDIQKLPDVYIQDIVEIFNYFDEEPPQQYSAMYNYYVATLTENVE >Mature_318_residues MDKSSGSEVKDRMVWPKVVYEIFVNKSGIHFFYIASILIALLVVVISYKFSENNNLVAYISFAATISSLILATFAIFYAV YTNGELAKSLSNVNDGAEIIGKSSKELRSSSENLNVTSKNIGDSMNDLIRRIDDIPRFIHEKIELVNSNVEKISNNLESF QAPKSNVGSNKINLDSNTSEFIRSLSVIVKIYSLVILLSNKSGKFITEDIGNIDVLDGILGLLTTSSIFSSLGLADVIVN KRREKNTLVVSKVLPDFEKAVFDEIERRFFTESDDIQKLPDVYIQDIVEIFNYFDEEPPQQYSAMYNYYVATLTENVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35748; Mature: 35748
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKSSGSEVKDRMVWPKVVYEIFVNKSGIHFFYIASILIALLVVVISYKFSENNNLVAYI CCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEH SFAATISSLILATFAIFYAVYTNGELAKSLSNVNDGAEIIGKSSKELRSSSENLNVTSKN HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHCCCHHHHHCCCCCCCCCHHH IGDSMNDLIRRIDDIPRFIHEKIELVNSNVEKISNNLESFQAPKSNVGSNKINLDSNTSE HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH FIRSLSVIVKIYSLVILLSNKSGKFITEDIGNIDVLDGILGLLTTSSIFSSLGLADVIVN HHHHHHHHHHHHHHHHHHCCCCCCEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH KRREKNTLVVSKVLPDFEKAVFDEIERRFFTESDDIQKLPDVYIQDIVEIFNYFDEEPPQ CCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHH QYSAMYNYYVATLTENVE HHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDKSSGSEVKDRMVWPKVVYEIFVNKSGIHFFYIASILIALLVVVISYKFSENNNLVAYI CCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEH SFAATISSLILATFAIFYAVYTNGELAKSLSNVNDGAEIIGKSSKELRSSSENLNVTSKN HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHCCCHHHHHCCCCCCCCCHHH IGDSMNDLIRRIDDIPRFIHEKIELVNSNVEKISNNLESFQAPKSNVGSNKINLDSNTSE HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH FIRSLSVIVKIYSLVILLSNKSGKFITEDIGNIDVLDGILGLLTTSSIFSSLGLADVIVN HHHHHHHHHHHHHHHHHHCCCCCCEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH KRREKNTLVVSKVLPDFEKAVFDEIERRFFTESDDIQKLPDVYIQDIVEIFNYFDEEPPQ CCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHH QYSAMYNYYVATLTENVE HHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA