Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is ygjT [C]
Identifier: 160874703
GI number: 160874703
Start: 1911006
End: 1911992
Strand: Direct
Name: ygjT [C]
Synonym: Sbal195_1586
Alternate gene names: 160874703
Gene position: 1911006-1911992 (Clockwise)
Preceding gene: 160874701
Following gene: 160874704
Centisome position: 35.74
GC content: 44.88
Gene sequence:
>987_bases ATGGAGTTTTTTACCACCCTATTTGTGGGTTACCCGCTTTGGGTTTGGTTGATGTTTTTCGGTTTTGTGCTGGCATTATT GGCCTTCGATCTTGGCGTATTACACAAAGAGCAGCATGAAATTACTGTGGCCGAAAGTTTAAAGCTTTCAGCTTTTTATA TCTGTATGGGCTTATTGTTTGGGGCTTGGCTCTGGTGGTACAAGGGCTCAACCGCGGGTATGGAATACTTGACGGGTTAT CTGATTGAAAAATCGCTTTCAATGGATAACGTATTTGTTATCGCTTTAATCTTCAGTAGTTTAGGCATTCCACGTTTATA CCAACACAGAGTGCTCTTCTGGGGTATTTTGGGCGTAATCGCGCTACGCGCGATTATGATTGGCCTTGGCGCAGTGCTCG TTGCCCAGTATCAAGGCGTACTGGTGTTATTTGGACTCTTCTTGATTTTCACTGGCGTGAAAATGCTCTTCTCCAATGAC GAGCACAGTGATATCCAAGATAATAAGTTTTACAAATGGTTACGCACTAAGATGCGTTTTACGCCGACACTGCATCAGGA AAAATTCTGGGTACGGGGTGAAGATCATCAGTTATCAAAAGGATGGTGGGCGACGCCGTTATTTTTAGCGTTGATCTTAG TGGAAACCGCAGATTTAGTGTTTGCTGTCGACAGTATTCCAGCCATTTTTGCGATTACCCAAGATCCTTTCATCGTTTAT ACCTCGAATATCTTCGCGATTTTGGGGCTACGTGCCTTGTATTTTGCCTTAGCGGCTATGGTGCATCGTTTCGAGTACCT TAAATACGCGCTGTCGGTGGTATTAGTGTTTATCGGGGTGAAAGTGGGCTTAGTGTATTTCAATTACGAGGGAATCGTGG ACTTTACTATTCCAACCGCACTGTCTCTTGGGGTGACGTTCGGCCTGTTAGTCGCAGGGGTCTTGTTCTCGCTGTGGAAA ACGCGCGGCCAAGAAATCGATAAATAG
Upstream 100 bases:
>100_bases ATATAGGATTTCACAGTTTATATTTCTACAATGAGTTAATGTCTATCTGCTCAATTGTACTGATTTTACTCAACCGTTAT GTTGGTTTTTAAGGAGACTT
Downstream 100 bases:
>100_bases GGAAATAGAGAAATAGAGAAATTGTTTGCGTGACTCGTGGCGAGTCCAATAACGAATCTCTTGGCCGTTTAGCCCATGCT AAACGGCCTTTTTTATATTC
Product: integral membrane protein TerC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MEFFTTLFVGYPLWVWLMFFGFVLALLAFDLGVLHKEQHEITVAESLKLSAFYICMGLLFGAWLWWYKGSTAGMEYLTGY LIEKSLSMDNVFVIALIFSSLGIPRLYQHRVLFWGILGVIALRAIMIGLGAVLVAQYQGVLVLFGLFLIFTGVKMLFSND EHSDIQDNKFYKWLRTKMRFTPTLHQEKFWVRGEDHQLSKGWWATPLFLALILVETADLVFAVDSIPAIFAITQDPFIVY TSNIFAILGLRALYFALAAMVHRFEYLKYALSVVLVFIGVKVGLVYFNYEGIVDFTIPTALSLGVTFGLLVAGVLFSLWK TRGQEIDK
Sequences:
>Translated_328_residues MEFFTTLFVGYPLWVWLMFFGFVLALLAFDLGVLHKEQHEITVAESLKLSAFYICMGLLFGAWLWWYKGSTAGMEYLTGY LIEKSLSMDNVFVIALIFSSLGIPRLYQHRVLFWGILGVIALRAIMIGLGAVLVAQYQGVLVLFGLFLIFTGVKMLFSND EHSDIQDNKFYKWLRTKMRFTPTLHQEKFWVRGEDHQLSKGWWATPLFLALILVETADLVFAVDSIPAIFAITQDPFIVY TSNIFAILGLRALYFALAAMVHRFEYLKYALSVVLVFIGVKVGLVYFNYEGIVDFTIPTALSLGVTFGLLVAGVLFSLWK TRGQEIDK >Mature_328_residues MEFFTTLFVGYPLWVWLMFFGFVLALLAFDLGVLHKEQHEITVAESLKLSAFYICMGLLFGAWLWWYKGSTAGMEYLTGY LIEKSLSMDNVFVIALIFSSLGIPRLYQHRVLFWGILGVIALRAIMIGLGAVLVAQYQGVLVLFGLFLIFTGVKMLFSND EHSDIQDNKFYKWLRTKMRFTPTLHQEKFWVRGEDHQLSKGWWATPLFLALILVETADLVFAVDSIPAIFAITQDPFIVY TSNIFAILGLRALYFALAAMVHRFEYLKYALSVVLVFIGVKVGLVYFNYEGIVDFTIPTALSLGVTFGLLVAGVLFSLWK TRGQEIDK
Specific function: Unknown
COG id: COG0861
COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the terC family [H]
Homologues:
Organism=Escherichia coli, GI48994922, Length=330, Percent_Identity=46.6666666666667, Blast_Score=256, Evalue=1e-69,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005496 - InterPro: IPR022369 [H]
Pfam domain/function: PF03741 TerC [H]
EC number: NA
Molecular weight: Translated: 37339; Mature: 37339
Theoretical pI: Translated: 7.23; Mature: 7.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFFTTLFVGYPLWVWLMFFGFVLALLAFDLGVLHKEQHEITVAESLKLSAFYICMGLLF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH GAWLWWYKGSTAGMEYLTGYLIEKSLSMDNVFVIALIFSSLGIPRLYQHRVLFWGILGVI HHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH ALRAIMIGLGAVLVAQYQGVLVLFGLFLIFTGVKMLFSNDEHSDIQDNKFYKWLRTKMRF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHC TPTLHQEKFWVRGEDHQLSKGWWATPLFLALILVETADLVFAVDSIPAIFAITQDPFIVY CCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEE TSNIFAILGLRALYFALAAMVHRFEYLKYALSVVLVFIGVKVGLVYFNYEGIVDFTIPTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEHHHHH LSLGVTFGLLVAGVLFSLWKTRGQEIDK HHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MEFFTTLFVGYPLWVWLMFFGFVLALLAFDLGVLHKEQHEITVAESLKLSAFYICMGLLF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH GAWLWWYKGSTAGMEYLTGYLIEKSLSMDNVFVIALIFSSLGIPRLYQHRVLFWGILGVI HHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH ALRAIMIGLGAVLVAQYQGVLVLFGLFLIFTGVKMLFSNDEHSDIQDNKFYKWLRTKMRF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHC TPTLHQEKFWVRGEDHQLSKGWWATPLFLALILVETADLVFAVDSIPAIFAITQDPFIVY CCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEE TSNIFAILGLRALYFALAAMVHRFEYLKYALSVVLVFIGVKVGLVYFNYEGIVDFTIPTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEHHHHH LSLGVTFGLLVAGVLFSLWKTRGQEIDK HHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA