| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874689
Identifier: 160874689
GI number: 160874689
Start: 1894018
End: 1894746
Strand: Reverse
Name: 160874689
Synonym: Sbal195_1572
Alternate gene names: NA
Gene position: 1894746-1894018 (Counterclockwise)
Preceding gene: 160874690
Following gene: 160874688
Centisome position: 35.43
GC content: 29.77
Gene sequence:
>729_bases ATGTCTTTTGAGTCTAATATATTATGTGTATTTGAAGGTGCTATTCGTGAACCGAGGTATTTTAACTCGCTAAAAAAAAA TTTTTTTAATGACGACAATATTTTTTACTGTTGTTATGGAAATGACTTATATGAACTATTTGATTTGCTTGATATGGATG GTGACTACAATATATTTGATTTAATTAAAGAAAACAATACTGTCGAAGCAAATAGGGATTTATTTGTTAGTCACGAGTCT GATGATTTTAATCAAGTGTTCATGTTTTTCGATTTTGAATATCACGATGATAAATTTGATACAGAAAAAATAAAAAAAAT GGCTCAGCTTTTTGATAATGAAACTTTACACGGGAAATTATTTATAAGCTATCCAATGATAGAATCTATTCGGGATGTTC CATCATTAAACTCTTTTTTAGACCATAAGGTTTCTTTAGAAAGTACAAAAGGAAAGATTTATAAAGAATTATCTACACAT GGTATTAGTGATTATGTTGACCCTAGAAAGATTACTAATGAAAATTGGAAAGCGTTAGTTAAGTTATCGATTAAAAAGTC TAATTATATTACGAATGGCGATTCTGAGAGCCTTTCTCTAGTACAGCAAAGTGATATCCTTGACGTACAGATTGCAGAAA TGGACACCGACTCAATCTATGTGCTGTGTTCATTTCCTATGTTTGTCCACCATCAAAAAGGTGAACAAATAGATATAACT TCTTCATAA
Upstream 100 bases:
>100_bases TTTGTGCTACATGAAAACAAGCAGTACCCATTTTATAAGTTGGTTGACAAAGAGTTAAGGCAAGCTCATAACTTAGAAAA AATTTACAAAGGGTTAAAGT
Downstream 100 bases:
>100_bases GGATATTAAAAGGCTCTTTTCTAGGTTCTGTGGTTTCTGTCGCAAACCAGTGGAAGTTAACTGGACACCCAGCCTTAATG GCGCTGCAATTAACCTCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MSFESNILCVFEGAIREPRYFNSLKKNFFNDDNIFYCCYGNDLYELFDLLDMDGDYNIFDLIKENNTVEANRDLFVSHES DDFNQVFMFFDFEYHDDKFDTEKIKKMAQLFDNETLHGKLFISYPMIESIRDVPSLNSFLDHKVSLESTKGKIYKELSTH GISDYVDPRKITNENWKALVKLSIKKSNYITNGDSESLSLVQQSDILDVQIAEMDTDSIYVLCSFPMFVHHQKGEQIDIT SS
Sequences:
>Translated_242_residues MSFESNILCVFEGAIREPRYFNSLKKNFFNDDNIFYCCYGNDLYELFDLLDMDGDYNIFDLIKENNTVEANRDLFVSHES DDFNQVFMFFDFEYHDDKFDTEKIKKMAQLFDNETLHGKLFISYPMIESIRDVPSLNSFLDHKVSLESTKGKIYKELSTH GISDYVDPRKITNENWKALVKLSIKKSNYITNGDSESLSLVQQSDILDVQIAEMDTDSIYVLCSFPMFVHHQKGEQIDIT SS >Mature_241_residues SFESNILCVFEGAIREPRYFNSLKKNFFNDDNIFYCCYGNDLYELFDLLDMDGDYNIFDLIKENNTVEANRDLFVSHESD DFNQVFMFFDFEYHDDKFDTEKIKKMAQLFDNETLHGKLFISYPMIESIRDVPSLNSFLDHKVSLESTKGKIYKELSTHG ISDYVDPRKITNENWKALVKLSIKKSNYITNGDSESLSLVQQSDILDVQIAEMDTDSIYVLCSFPMFVHHQKGEQIDITS S
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28272; Mature: 28141
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFESNILCVFEGAIREPRYFNSLKKNFFNDDNIFYCCYGNDLYELFDLLDMDGDYNIFD CCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHCCCCCCCCEE LIKENNTVEANRDLFVSHESDDFNQVFMFFDFEYHDDKFDTEKIKKMAQLFDNETLHGKL EEECCCEEECCCEEEEEECCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEE FISYPMIESIRDVPSLNSFLDHKVSLESTKGKIYKELSTHGISDYVDPRKITNENWKALV EEECCHHHHHHCCCCHHHHHHCCEEEECCCCHHHHHHHHCCCCCCCCCHHCCCCCCEEEE KLSIKKSNYITNGDSESLSLVQQSDILDVQIAEMDTDSIYVLCSFPMFVHHQKGEQIDIT EEEEECCCCCCCCCCHHHHHHHHCCCEEEEEEEECCCCEEEEEECCEEEECCCCCEEEEC SS CC >Mature Secondary Structure SFESNILCVFEGAIREPRYFNSLKKNFFNDDNIFYCCYGNDLYELFDLLDMDGDYNIFD CCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHCCCCCCCCEE LIKENNTVEANRDLFVSHESDDFNQVFMFFDFEYHDDKFDTEKIKKMAQLFDNETLHGKL EEECCCEEECCCEEEEEECCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEE FISYPMIESIRDVPSLNSFLDHKVSLESTKGKIYKELSTHGISDYVDPRKITNENWKALV EEECCHHHHHHCCCCHHHHHHCCEEEECCCCHHHHHHHHCCCCCCCCCHHCCCCCCEEEE KLSIKKSNYITNGDSESLSLVQQSDILDVQIAEMDTDSIYVLCSFPMFVHHQKGEQIDIT EEEEECCCCCCCCCCHHHHHHHHCCCEEEEEEEECCCCEEEEEECCEEEECCCCCEEEEC SS CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA