| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874679
Identifier: 160874679
GI number: 160874679
Start: 1881728
End: 1882549
Strand: Reverse
Name: 160874679
Synonym: Sbal195_1562
Alternate gene names: NA
Gene position: 1882549-1881728 (Counterclockwise)
Preceding gene: 160874682
Following gene: 160874677
Centisome position: 35.21
GC content: 47.32
Gene sequence:
>822_bases ATGTTAGGAACGCTAAAGAAGATGCGCGTACAGTTAGATGACGCGCAACAAGTGCAATATCAACTCGTTGTCGGTGATGA GTTACTCCCGCTCAATCCATTGATAGGCAAGCAATTAACCTTGACCCACACGGGCAATATCTTCTGCTGTAACTGCGGTA AAAAGAGTAAGAAGAGTTACTCGCAGGGCCACTGTTTTGTCTGTATGCAAAAGCTGGCGAGTTGCGATATGTGCATCATG AAGCCGGAAACCTGCCATTACGACCAAGGTACTTGCCGCGAGCCAGAGTGGGCCCAGAGCCACTGTTTTGTGCCGCATTA TGTGTATTTGGCGAATACTTCAGGCGTTAAAGTCGGCATTACCCGCCACACGCAACTGCCCACCCGTTGGATTGACCAAG GTGCCACCCAAGGTTTGCCGATTTTTAAAGTGTCAACAAGGCAACTCTCAGGTCTGGTCGAAGTAGAATTGGCGAAACTG GTCAACGATAAAACCCATTGGCAAGCCATGTTAAAGGGCCACGCCGACGATATCGATTTAAATGCGAAAGCCGCAGAACT GATCCCGCAAATTGAGGCTAAGTTGCATGAAATCGGTATGCAAAAAGGCGATTACAGTATCGAGCGTTTAGATGAAACGA TTCAGCCGATTCATTATCCCATCGACACCTTTCCGAAGAAGATCACTTCCCACAACTTCGATAAAAATGGGGTGGTAAGC GGGATTTTGCAGGGGATTAAAGGCCAGTATTTAATGTTCGATACCGGCGTGATTAATATTCGTAAGTTTTCATCCTACGA GATCAGCGTCGAGCACGACTGA
Upstream 100 bases:
>100_bases TGTATACTGGCGGCCACGCAATGACGATATAATGAAAGCGTGCACTAGACCGCATGATGAGCGACTAAGCTGCACCAGAA CGCAACACATTAGGATTACC
Downstream 100 bases:
>100_bases TAGCCTAAAATCGAAACGGGCCTTACCCGTTAAAATGAAAAAGCGCGGCAGTTTTCACTGTCGCGCCCTTTATTGAGATG GCTGTCACTAAAATACCATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MLGTLKKMRVQLDDAQQVQYQLVVGDELLPLNPLIGKQLTLTHTGNIFCCNCGKKSKKSYSQGHCFVCMQKLASCDMCIM KPETCHYDQGTCREPEWAQSHCFVPHYVYLANTSGVKVGITRHTQLPTRWIDQGATQGLPIFKVSTRQLSGLVEVELAKL VNDKTHWQAMLKGHADDIDLNAKAAELIPQIEAKLHEIGMQKGDYSIERLDETIQPIHYPIDTFPKKITSHNFDKNGVVS GILQGIKGQYLMFDTGVINIRKFSSYEISVEHD
Sequences:
>Translated_273_residues MLGTLKKMRVQLDDAQQVQYQLVVGDELLPLNPLIGKQLTLTHTGNIFCCNCGKKSKKSYSQGHCFVCMQKLASCDMCIM KPETCHYDQGTCREPEWAQSHCFVPHYVYLANTSGVKVGITRHTQLPTRWIDQGATQGLPIFKVSTRQLSGLVEVELAKL VNDKTHWQAMLKGHADDIDLNAKAAELIPQIEAKLHEIGMQKGDYSIERLDETIQPIHYPIDTFPKKITSHNFDKNGVVS GILQGIKGQYLMFDTGVINIRKFSSYEISVEHD >Mature_273_residues MLGTLKKMRVQLDDAQQVQYQLVVGDELLPLNPLIGKQLTLTHTGNIFCCNCGKKSKKSYSQGHCFVCMQKLASCDMCIM KPETCHYDQGTCREPEWAQSHCFVPHYVYLANTSGVKVGITRHTQLPTRWIDQGATQGLPIFKVSTRQLSGLVEVELAKL VNDKTHWQAMLKGHADDIDLNAKAAELIPQIEAKLHEIGMQKGDYSIERLDETIQPIHYPIDTFPKKITSHNFDKNGVVS GILQGIKGQYLMFDTGVINIRKFSSYEISVEHD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30750; Mature: 30750
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGTLKKMRVQLDDAQQVQYQLVVGDELLPLNPLIGKQLTLTHTGNIFCCNCGKKSKKSY CCCCCHHHHEECCCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCEEEECCCCHHCCCC SQGHCFVCMQKLASCDMCIMKPETCHYDQGTCREPEWAQSHCFVPHYVYLANTSGVKVGI CCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCCEEEEE TRHTQLPTRWIDQGATQGLPIFKVSTRQLSGLVEVELAKLVNDKTHWQAMLKGHADDIDL EECCCCCHHHHHCCCCCCCEEEEECHHHHCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCC NAKAAELIPQIEAKLHEIGMQKGDYSIERLDETIQPIHYPIDTFPKKITSHNFDKNGVVS CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHH GILQGIKGQYLMFDTGVINIRKFSSYEISVEHD HHHHHCCCCEEEEECCEEEEEEECCEEEEEECC >Mature Secondary Structure MLGTLKKMRVQLDDAQQVQYQLVVGDELLPLNPLIGKQLTLTHTGNIFCCNCGKKSKKSY CCCCCHHHHEECCCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCEEEECCCCHHCCCC SQGHCFVCMQKLASCDMCIMKPETCHYDQGTCREPEWAQSHCFVPHYVYLANTSGVKVGI CCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCCEEEEE TRHTQLPTRWIDQGATQGLPIFKVSTRQLSGLVEVELAKLVNDKTHWQAMLKGHADDIDL EECCCCCHHHHHCCCCCCCEEEEECHHHHCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCC NAKAAELIPQIEAKLHEIGMQKGDYSIERLDETIQPIHYPIDTFPKKITSHNFDKNGVVS CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHH GILQGIKGQYLMFDTGVINIRKFSSYEISVEHD HHHHHCCCCEEEEECCEEEEEEECCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA