Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is 160874670
Identifier: 160874670
GI number: 160874670
Start: 1872743
End: 1873573
Strand: Direct
Name: 160874670
Synonym: Sbal195_1553
Alternate gene names: NA
Gene position: 1872743-1873573 (Clockwise)
Preceding gene: 160874669
Following gene: 160874672
Centisome position: 35.02
GC content: 45.13
Gene sequence:
>831_bases ATGCTGTACCACTTAGAAGCGACCAATCCACTAGAACAATGTTTTGAAAAGGCATTAAGCAATAATGCGCACGCTGAGGC GTTTTATCAGCAATTGAGCCAAGCAAAACTCTTTATCTTGAGTGAGAGTAGCGAGGATGCGCCGCAGGCGGGCGATGGTG CTATCGCGATCAGCATCAAGCAATGGTATATCCCCTTAGAAGATGGCAGCGATCATCCTTTTACCCCTATTTTTACCTCT CAAATTGCGGTTGATAAAGCCATTGAGCTGATGAAAAGCGAAGGCACTGAGTACCATGGCGTGATGGAACTCGAAGCGGC CACGATTTTTCAGCTGCTATTGCAGTCGGGCAATGATATGGCGCTGAATCCCAACAGTAATATGTCGAAAACCTTAGATG AAGATGAGATCCGCTATATGCTATTGCCGGATTTTTCTTTGGTTGAGCAAAGGGGTGCACTGGTTATTCTGGGCAAAGTC TTCAGTGATGAACTGCCCATTTTTGCGGAGTTAAAGGAAATACTCTCAAACTATAAGCGTGTCCAGAAAGCCTATCTTAT CGAATCCAACTCGTTGAACTTTGGTAGGAGTTGCACAGATCATGCGCTCTGTTTGGTGGTGCAGTTTGTAGATGATAATA CCGATGATTTAAGTCGGATCAGGGCAGATGTGGATAGAATGCAGCGTAAAATGGACCCCAATAGTTGGGAGGTGAAAGTG CATCAAATGCGCGCAGATGTTCAAGAACCCCTCGGACAGTTTTGTGTTGAAAAAGCCGAGCCTTTTTACAGTCAGTCGTT GTTTGCAAAAATGAAGCGTTGGTTTGCCTAA
Upstream 100 bases:
>100_bases CCCGCTCGATATTATTTGTTCAGTGTTAATTGAATTGCTTAAAGTATTTTAACGCTTTGATAAAAAAGGACTGAACTGCT AAATAAAAGGATGTTTGTCA
Downstream 100 bases:
>100_bases TCATAAATAACAGGCTGAGCTATTTACCTGCTCATTAAATGAGTTAAGACTTATTCGCGCTTTCTGTGGCGATCATCGCT GCTATTTTGTCGCCGCAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MLYHLEATNPLEQCFEKALSNNAHAEAFYQQLSQAKLFILSESSEDAPQAGDGAIAISIKQWYIPLEDGSDHPFTPIFTS QIAVDKAIELMKSEGTEYHGVMELEAATIFQLLLQSGNDMALNPNSNMSKTLDEDEIRYMLLPDFSLVEQRGALVILGKV FSDELPIFAELKEILSNYKRVQKAYLIESNSLNFGRSCTDHALCLVVQFVDDNTDDLSRIRADVDRMQRKMDPNSWEVKV HQMRADVQEPLGQFCVEKAEPFYSQSLFAKMKRWFA
Sequences:
>Translated_276_residues MLYHLEATNPLEQCFEKALSNNAHAEAFYQQLSQAKLFILSESSEDAPQAGDGAIAISIKQWYIPLEDGSDHPFTPIFTS QIAVDKAIELMKSEGTEYHGVMELEAATIFQLLLQSGNDMALNPNSNMSKTLDEDEIRYMLLPDFSLVEQRGALVILGKV FSDELPIFAELKEILSNYKRVQKAYLIESNSLNFGRSCTDHALCLVVQFVDDNTDDLSRIRADVDRMQRKMDPNSWEVKV HQMRADVQEPLGQFCVEKAEPFYSQSLFAKMKRWFA >Mature_276_residues MLYHLEATNPLEQCFEKALSNNAHAEAFYQQLSQAKLFILSESSEDAPQAGDGAIAISIKQWYIPLEDGSDHPFTPIFTS QIAVDKAIELMKSEGTEYHGVMELEAATIFQLLLQSGNDMALNPNSNMSKTLDEDEIRYMLLPDFSLVEQRGALVILGKV FSDELPIFAELKEILSNYKRVQKAYLIESNSLNFGRSCTDHALCLVVQFVDDNTDDLSRIRADVDRMQRKMDPNSWEVKV HQMRADVQEPLGQFCVEKAEPFYSQSLFAKMKRWFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31375; Mature: 31375
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYHLEATNPLEQCFEKALSNNAHAEAFYQQLSQAKLFILSESSEDAPQAGDGAIAISIK CEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHCEEEEEECCCCCCCCCCCCEEEEEEE QWYIPLEDGSDHPFTPIFTSQIAVDKAIELMKSEGTEYHGVMELEAATIFQLLLQSGNDM EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHCCCCE ALNPNSNMSKTLDEDEIRYMLLPDFSLVEQRGALVILGKVFSDELPIFAELKEILSNYKR EECCCCCCHHCCCCCCEEEEECCCHHHHHHCCCEEEEEEHHCCCCCHHHHHHHHHHHHHH VQKAYLIESNSLNFGRSCTDHALCLVVQFVDDNTDDLSRIRADVDRMQRKMDPNSWEVKV HHHHHHEECCCCCCCCCCHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEEH HQMRADVQEPLGQFCVEKAEPFYSQSLFAKMKRWFA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MLYHLEATNPLEQCFEKALSNNAHAEAFYQQLSQAKLFILSESSEDAPQAGDGAIAISIK CEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHCEEEEEECCCCCCCCCCCCEEEEEEE QWYIPLEDGSDHPFTPIFTSQIAVDKAIELMKSEGTEYHGVMELEAATIFQLLLQSGNDM EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHCCCCE ALNPNSNMSKTLDEDEIRYMLLPDFSLVEQRGALVILGKVFSDELPIFAELKEILSNYKR EECCCCCCHHCCCCCCEEEEECCCHHHHHHCCCEEEEEEHHCCCCCHHHHHHHHHHHHHH VQKAYLIESNSLNFGRSCTDHALCLVVQFVDDNTDDLSRIRADVDRMQRKMDPNSWEVKV HHHHHHEECCCCCCCCCCHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEEH HQMRADVQEPLGQFCVEKAEPFYSQSLFAKMKRWFA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA