Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

Click here to switch to the map view.

The map label for this gene is 160874665

Identifier: 160874665

GI number: 160874665

Start: 1867190

End: 1867891

Strand: Direct

Name: 160874665

Synonym: Sbal195_1548

Alternate gene names: NA

Gene position: 1867190-1867891 (Clockwise)

Preceding gene: 160874664

Following gene: 160874666

Centisome position: 34.92

GC content: 51.14

Gene sequence:

>702_bases
ATGTCGCTTATTCCCGGTCGTCCTAGGGGCGTCGTTCCATTTAGCGCCCAACCTGAATCGCCGCCCATTCTCGGTCGTCC
GAAGGGAAACTCAGACGCGCGTCAACGCTTAATAACCGCTGCCTTAAGTCTTTTTAGTCATCGCAGTTATCCTACTGTGT
CTACCCGTGAAATCGCCCGCGAAGCCGAGGTCGATGCCGCGCTTATCCGTTACTATTTTGGTTCGAAAGCGGGTTTGTTC
GAACAAATGGTGCGAGAAACCCTTGAGCCCGTATTAACCCGTTTACGCGAAATATCCGCGGCTGAAGCGCCGAATAATGT
CGGCGAAATCATGCAGACATACTATCGCGTTATGGCGCCCAACCCTGGCTTGCCACGGCTGATTATACGGGTGTTGCAGG
AGGGCGATGGCTCAGAACCCTATCGGATTATCTTGTCCGTGTTTGAGCAAGTGTTAACTCTGTCGCGGCAATGGCTCGAA
TCCACGTTAGTTAATTCGGGATTATTAAAAGAGGGTGTCGACCCCGATTTAGCACGGCTAAGTTTTGTGAGTCTTATGGT
ATTTCCGCTTATTGCCCCGCCCGTATTAATGCGTCAGTTCGGCTTTTTTGATGCCGATGCTGCGCTTTTGCAGCGCTTAG
CTCTGCACAATATGCAGGTTTTTACGCAGGGACTGTTATGTGAACCAAGGAGCCAGTCATGA

Upstream 100 bases:

>100_bases
TAAATTCCTCAATACCAATGAAAATGAGGAATTTAACTGCTGCCTTTTTACGCGGCGTTTCAGTATATTCATCAATAGAT
GAATTTTGCTGGAGCCTGCC

Downstream 100 bases:

>100_bases
GCTCAACGAAAGGTTTGACTATGTTGAATGACCAAGATTTTAGTCGCAATCGTTTCAGTAAAAGCAACTCAAGTAACAAC
AGGTTAAGTAGCAGCAAGTT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator TetR Family; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator Of TetR Family Protein; Regulatory Protein TetR

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MSLIPGRPRGVVPFSAQPESPPILGRPKGNSDARQRLITAALSLFSHRSYPTVSTREIAREAEVDAALIRYYFGSKAGLF
EQMVRETLEPVLTRLREISAAEAPNNVGEIMQTYYRVMAPNPGLPRLIIRVLQEGDGSEPYRIILSVFEQVLTLSRQWLE
STLVNSGLLKEGVDPDLARLSFVSLMVFPLIAPPVLMRQFGFFDADAALLQRLALHNMQVFTQGLLCEPRSQS

Sequences:

>Translated_233_residues
MSLIPGRPRGVVPFSAQPESPPILGRPKGNSDARQRLITAALSLFSHRSYPTVSTREIAREAEVDAALIRYYFGSKAGLF
EQMVRETLEPVLTRLREISAAEAPNNVGEIMQTYYRVMAPNPGLPRLIIRVLQEGDGSEPYRIILSVFEQVLTLSRQWLE
STLVNSGLLKEGVDPDLARLSFVSLMVFPLIAPPVLMRQFGFFDADAALLQRLALHNMQVFTQGLLCEPRSQS
>Mature_232_residues
SLIPGRPRGVVPFSAQPESPPILGRPKGNSDARQRLITAALSLFSHRSYPTVSTREIAREAEVDAALIRYYFGSKAGLFE
QMVRETLEPVLTRLREISAAEAPNNVGEIMQTYYRVMAPNPGLPRLIIRVLQEGDGSEPYRIILSVFEQVLTLSRQWLES
TLVNSGLLKEGVDPDLARLSFVSLMVFPLIAPPVLMRQFGFFDADAALLQRLALHNMQVFTQGLLCEPRSQS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25966; Mature: 25835

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLIPGRPRGVVPFSAQPESPPILGRPKGNSDARQRLITAALSLFSHRSYPTVSTREIAR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
EAEVDAALIRYYFGSKAGLFEQMVRETLEPVLTRLREISAAEAPNNVGEIMQTYYRVMAP
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
NPGLPRLIIRVLQEGDGSEPYRIILSVFEQVLTLSRQWLESTLVNSGLLKEGVDPDLARL
CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
SFVSLMVFPLIAPPVLMRQFGFFDADAALLQRLALHNMQVFTQGLLCEPRSQS
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SLIPGRPRGVVPFSAQPESPPILGRPKGNSDARQRLITAALSLFSHRSYPTVSTREIAR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
EAEVDAALIRYYFGSKAGLFEQMVRETLEPVLTRLREISAAEAPNNVGEIMQTYYRVMAP
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
NPGLPRLIIRVLQEGDGSEPYRIILSVFEQVLTLSRQWLESTLVNSGLLKEGVDPDLARL
CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
SFVSLMVFPLIAPPVLMRQFGFFDADAALLQRLALHNMQVFTQGLLCEPRSQS
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA