Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is 160874665
Identifier: 160874665
GI number: 160874665
Start: 1867190
End: 1867891
Strand: Direct
Name: 160874665
Synonym: Sbal195_1548
Alternate gene names: NA
Gene position: 1867190-1867891 (Clockwise)
Preceding gene: 160874664
Following gene: 160874666
Centisome position: 34.92
GC content: 51.14
Gene sequence:
>702_bases ATGTCGCTTATTCCCGGTCGTCCTAGGGGCGTCGTTCCATTTAGCGCCCAACCTGAATCGCCGCCCATTCTCGGTCGTCC GAAGGGAAACTCAGACGCGCGTCAACGCTTAATAACCGCTGCCTTAAGTCTTTTTAGTCATCGCAGTTATCCTACTGTGT CTACCCGTGAAATCGCCCGCGAAGCCGAGGTCGATGCCGCGCTTATCCGTTACTATTTTGGTTCGAAAGCGGGTTTGTTC GAACAAATGGTGCGAGAAACCCTTGAGCCCGTATTAACCCGTTTACGCGAAATATCCGCGGCTGAAGCGCCGAATAATGT CGGCGAAATCATGCAGACATACTATCGCGTTATGGCGCCCAACCCTGGCTTGCCACGGCTGATTATACGGGTGTTGCAGG AGGGCGATGGCTCAGAACCCTATCGGATTATCTTGTCCGTGTTTGAGCAAGTGTTAACTCTGTCGCGGCAATGGCTCGAA TCCACGTTAGTTAATTCGGGATTATTAAAAGAGGGTGTCGACCCCGATTTAGCACGGCTAAGTTTTGTGAGTCTTATGGT ATTTCCGCTTATTGCCCCGCCCGTATTAATGCGTCAGTTCGGCTTTTTTGATGCCGATGCTGCGCTTTTGCAGCGCTTAG CTCTGCACAATATGCAGGTTTTTACGCAGGGACTGTTATGTGAACCAAGGAGCCAGTCATGA
Upstream 100 bases:
>100_bases TAAATTCCTCAATACCAATGAAAATGAGGAATTTAACTGCTGCCTTTTTACGCGGCGTTTCAGTATATTCATCAATAGAT GAATTTTGCTGGAGCCTGCC
Downstream 100 bases:
>100_bases GCTCAACGAAAGGTTTGACTATGTTGAATGACCAAGATTTTAGTCGCAATCGTTTCAGTAAAAGCAACTCAAGTAACAAC AGGTTAAGTAGCAGCAAGTT
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; Transcriptional Regulator TetR Family; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator Of TetR Family Protein; Regulatory Protein TetR
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MSLIPGRPRGVVPFSAQPESPPILGRPKGNSDARQRLITAALSLFSHRSYPTVSTREIAREAEVDAALIRYYFGSKAGLF EQMVRETLEPVLTRLREISAAEAPNNVGEIMQTYYRVMAPNPGLPRLIIRVLQEGDGSEPYRIILSVFEQVLTLSRQWLE STLVNSGLLKEGVDPDLARLSFVSLMVFPLIAPPVLMRQFGFFDADAALLQRLALHNMQVFTQGLLCEPRSQS
Sequences:
>Translated_233_residues MSLIPGRPRGVVPFSAQPESPPILGRPKGNSDARQRLITAALSLFSHRSYPTVSTREIAREAEVDAALIRYYFGSKAGLF EQMVRETLEPVLTRLREISAAEAPNNVGEIMQTYYRVMAPNPGLPRLIIRVLQEGDGSEPYRIILSVFEQVLTLSRQWLE STLVNSGLLKEGVDPDLARLSFVSLMVFPLIAPPVLMRQFGFFDADAALLQRLALHNMQVFTQGLLCEPRSQS >Mature_232_residues SLIPGRPRGVVPFSAQPESPPILGRPKGNSDARQRLITAALSLFSHRSYPTVSTREIAREAEVDAALIRYYFGSKAGLFE QMVRETLEPVLTRLREISAAEAPNNVGEIMQTYYRVMAPNPGLPRLIIRVLQEGDGSEPYRIILSVFEQVLTLSRQWLES TLVNSGLLKEGVDPDLARLSFVSLMVFPLIAPPVLMRQFGFFDADAALLQRLALHNMQVFTQGLLCEPRSQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25966; Mature: 25835
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLIPGRPRGVVPFSAQPESPPILGRPKGNSDARQRLITAALSLFSHRSYPTVSTREIAR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH EAEVDAALIRYYFGSKAGLFEQMVRETLEPVLTRLREISAAEAPNNVGEIMQTYYRVMAP HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC NPGLPRLIIRVLQEGDGSEPYRIILSVFEQVLTLSRQWLESTLVNSGLLKEGVDPDLARL CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH SFVSLMVFPLIAPPVLMRQFGFFDADAALLQRLALHNMQVFTQGLLCEPRSQS HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SLIPGRPRGVVPFSAQPESPPILGRPKGNSDARQRLITAALSLFSHRSYPTVSTREIAR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH EAEVDAALIRYYFGSKAGLFEQMVRETLEPVLTRLREISAAEAPNNVGEIMQTYYRVMAP HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC NPGLPRLIIRVLQEGDGSEPYRIILSVFEQVLTLSRQWLESTLVNSGLLKEGVDPDLARL CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH SFVSLMVFPLIAPPVLMRQFGFFDADAALLQRLALHNMQVFTQGLLCEPRSQS HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA