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The map label for this gene is ompW [H]

Identifier: 160874638

GI number: 160874638

Start: 1833421

End: 1834065

Strand: Direct

Name: ompW [H]

Synonym: Sbal195_1521

Alternate gene names: 160874638

Gene position: 1833421-1834065 (Clockwise)

Preceding gene: 160874637

Following gene: 160874640

Centisome position: 34.29

GC content: 44.34

Gene sequence:

>645_bases
ATGATGAACAAAAATACTGTTTCTACACTGATCGCTGCCACCCTTTTAGCTGCTGGTTTTTCTGCTTCTGTATCGGCTCA
CCAAGCAGGTGACATTATCGTTCGTGCGGGTGCCATCGTTGTTGCGCCAAACGAATCAAGCGATGATGTTGCTGGTAAAG
GCGAGTTCCAAATCAGTAACGACACTCAACTGGGTTTGAACTTTGGTTATATGTTGACTGATAACTTTGGGGTAGAGCTA
TTAGCAGCAACGCCTTTTAGCCATGACGTTTCTTTGGGTGGGACTAAAATTGCTGAAACTAAGCAACTGCCGCCAACGCT
AGTGGCACAGTACTATTTCGGTAATTCTCAATCAGTGGTTCGCCCTTACATTGGCGTCGGTGTTAATTACACTAACTTTT
ATGATAATGAGTTCACCAATGATTTAGGTGGTGCGTTAACTGACTTAAGCATGACCACGTCTTGGGGCTTAGCGGCACAA
GCGGGTATTGACTATCAGGTTAGCAAAAACTGGTTAGTGAACGCATCTGTGTGGTACGCGCAAATTAGCAGCGATGTGAA
GTTTAAATTATCGGGTGACACTGTGGTTATTGGTACCGATATTGACCCATGGGTTTATATGGTCAGCGTAGGTTACACTT
TCTAA

Upstream 100 bases:

>100_bases
ATTTGGATCAATAAAGTGGCCGCGCTTCTCTGGCAGTGTAGGCGTCAATTGTTAAGGATGTAATTTAAAACAAAAACCTA
TGTTGTACATATGGAGTATG

Downstream 100 bases:

>100_bases
TCTACGGATCAGATAAGCGTAAAAAAGGAGCCTTAGGCTCCTTTTTCGTTTCTGCACTTTATCCTGACATGTTCCACTAA
GGTTAAGCCGACTTAGCGCT

Product: outer membrane protein W

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MMNKNTVSTLIAATLLAAGFSASVSAHQAGDIIVRAGAIVVAPNESSDDVAGKGEFQISNDTQLGLNFGYMLTDNFGVEL
LAATPFSHDVSLGGTKIAETKQLPPTLVAQYYFGNSQSVVRPYIGVGVNYTNFYDNEFTNDLGGALTDLSMTTSWGLAAQ
AGIDYQVSKNWLVNASVWYAQISSDVKFKLSGDTVVIGTDIDPWVYMVSVGYTF

Sequences:

>Translated_214_residues
MMNKNTVSTLIAATLLAAGFSASVSAHQAGDIIVRAGAIVVAPNESSDDVAGKGEFQISNDTQLGLNFGYMLTDNFGVEL
LAATPFSHDVSLGGTKIAETKQLPPTLVAQYYFGNSQSVVRPYIGVGVNYTNFYDNEFTNDLGGALTDLSMTTSWGLAAQ
AGIDYQVSKNWLVNASVWYAQISSDVKFKLSGDTVVIGTDIDPWVYMVSVGYTF
>Mature_214_residues
MMNKNTVSTLIAATLLAAGFSASVSAHQAGDIIVRAGAIVVAPNESSDDVAGKGEFQISNDTQLGLNFGYMLTDNFGVEL
LAATPFSHDVSLGGTKIAETKQLPPTLVAQYYFGNSQSVVRPYIGVGVNYTNFYDNEFTNDLGGALTDLSMTTSWGLAAQ
AGIDYQVSKNWLVNASVWYAQISSDVKFKLSGDTVVIGTDIDPWVYMVSVGYTF

Specific function: Acts As A Receptor For Colicin S4. [C]

COG id: COG3047

COG function: function code M; Outer membrane protein W

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OmpW/AlkL family [H]

Homologues:

Organism=Escherichia coli, GI1787510, Length=217, Percent_Identity=49.7695852534562, Blast_Score=207, Evalue=4e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR005618 [H]

Pfam domain/function: PF03922 OmpW [H]

EC number: NA

Molecular weight: Translated: 22839; Mature: 22839

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNKNTVSTLIAATLLAAGFSASVSAHQAGDIIVRAGAIVVAPNESSDDVAGKGEFQISN
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCEEEECCCCCCCCCCCCCEEEECC
DTQLGLNFGYMLTDNFGVELLAATPFSHDVSLGGTKIAETKQLPPTLVAQYYFGNSQSVV
CCEECEEEEEEEECCCCEEEEEECCCCCCCCCCCCEECCCCCCCHHHEEEEEECCCCCEE
RPYIGVGVNYTNFYDNEFTNDLGGALTDLSMTTSWGLAAQAGIDYQVSKNWLVNASVWYA
CHHHHCCCEECEECCCCCCCHHCCCEECCEEECCCCCEECCCCCEEECCCEEEEEEEEEE
QISSDVKFKLSGDTVVIGTDIDPWVYMVSVGYTF
EECCCEEEEECCCEEEEECCCCCEEEEEEEECCC
>Mature Secondary Structure
MMNKNTVSTLIAATLLAAGFSASVSAHQAGDIIVRAGAIVVAPNESSDDVAGKGEFQISN
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCEEEECCCCCCCCCCCCCEEEECC
DTQLGLNFGYMLTDNFGVELLAATPFSHDVSLGGTKIAETKQLPPTLVAQYYFGNSQSVV
CCEECEEEEEEEECCCCEEEEEECCCCCCCCCCCCEECCCCCCCHHHEEEEEECCCCCEE
RPYIGVGVNYTNFYDNEFTNDLGGALTDLSMTTSWGLAAQAGIDYQVSKNWLVNASVWYA
CHHHHCCCEECEECCCCCCCHHCCCEECCEEECCCCCEECCCCCEEECCCEEEEEEEEEE
QISSDVKFKLSGDTVVIGTDIDPWVYMVSVGYTF
EECCCEEEEECCCEEEEECCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]