| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874628
Identifier: 160874628
GI number: 160874628
Start: 1823113
End: 1823562
Strand: Reverse
Name: 160874628
Synonym: Sbal195_1511
Alternate gene names: NA
Gene position: 1823562-1823113 (Counterclockwise)
Preceding gene: 160874629
Following gene: 160874627
Centisome position: 34.1
GC content: 44.0
Gene sequence:
>450_bases ATGATGATGTTTGTAAAAAAACTGTTCTTCCCCCCTAAAAAAAGTCCCTCATTTAGCTTTATTTCTCGAGGCACTAAACT CACGGGGAACATCGAATTAACGGGCGATGTGCTTATTGGCGGTGATATTCAAGGTCAACTGCTTTCTGGGGCTAATATCA CGATAGAACAAGGCGGTACGATTCAAGGCGAAGTAAAGTGCCATGAATTTATCGTTGACGGACACTTCAAAGGCAGACTC ATTTGTGAGCGTTTAGTGATCCAGCGTAATGGCGTTGTCGATGGCGAAGTGGCGAGTACTTCAATGCAAATTCTTGAGGG CGGCCAATTTATCGGCATGCGGATTAAAGAAGATGCGCCAACCATTTATTCCCATGCAATAGGCCACACTCCTGCAACAG ACAATCGTAACTTATCGCACGTACAAAACGATGTTATAGAATCTCGCTAA
Upstream 100 bases:
>100_bases CCATCGCATTACCCACACAAAGCTGTGCTTATCATACGTTTTACGCTAGTATCGCGCCTCTATTGAACTCAGTTAATCCC TTCTCGAATTAAGTTGATTT
Downstream 100 bases:
>100_bases AACGGCGAATAAATGACACTCGCAAGCTCACCCACTTAGGCGAGCTTGTATTTTTAGCTCGATCTTTTCTTAATACCCCG ACTCAAAGCCCTTCACTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MMMFVKKLFFPPKKSPSFSFISRGTKLTGNIELTGDVLIGGDIQGQLLSGANITIEQGGTIQGEVKCHEFIVDGHFKGRL ICERLVIQRNGVVDGEVASTSMQILEGGQFIGMRIKEDAPTIYSHAIGHTPATDNRNLSHVQNDVIESR
Sequences:
>Translated_149_residues MMMFVKKLFFPPKKSPSFSFISRGTKLTGNIELTGDVLIGGDIQGQLLSGANITIEQGGTIQGEVKCHEFIVDGHFKGRL ICERLVIQRNGVVDGEVASTSMQILEGGQFIGMRIKEDAPTIYSHAIGHTPATDNRNLSHVQNDVIESR >Mature_149_residues MMMFVKKLFFPPKKSPSFSFISRGTKLTGNIELTGDVLIGGDIQGQLLSGANITIEQGGTIQGEVKCHEFIVDGHFKGRL ICERLVIQRNGVVDGEVASTSMQILEGGQFIGMRIKEDAPTIYSHAIGHTPATDNRNLSHVQNDVIESR
Specific function: Unknown
COG id: COG1664
COG function: function code M; Integral membrane protein CcmA involved in cell shape determination
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16285; Mature: 16285
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMMFVKKLFFPPKKSPSFSFISRGTKLTGNIELTGDVLIGGDIQGQLLSGANITIEQGGT CCEEEHHHCCCCCCCCCCHHHHCCCEEEEEEEEEEEEEECCCCCCEEECCCEEEEECCCE IQGEVKCHEFIVDGHFKGRLICERLVIQRNGVVDGEVASTSMQILEGGQFIGMRIKEDAP EEEEEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCC TIYSHAIGHTPATDNRNLSHVQNDVIESR CHHHHHCCCCCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure MMMFVKKLFFPPKKSPSFSFISRGTKLTGNIELTGDVLIGGDIQGQLLSGANITIEQGGT CCEEEHHHCCCCCCCCCCHHHHCCCEEEEEEEEEEEEEECCCCCCEEECCCEEEEECCCE IQGEVKCHEFIVDGHFKGRLICERLVIQRNGVVDGEVASTSMQILEGGQFIGMRIKEDAP EEEEEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCC TIYSHAIGHTPATDNRNLSHVQNDVIESR CHHHHHCCCCCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA