| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is 160874626
Identifier: 160874626
GI number: 160874626
Start: 1819023
End: 1821317
Strand: Reverse
Name: 160874626
Synonym: Sbal195_1509
Alternate gene names: NA
Gene position: 1821317-1819023 (Counterclockwise)
Preceding gene: 160874627
Following gene: 160874617
Centisome position: 34.06
GC content: 46.32
Gene sequence:
>2295_bases ATGATGAAAAACTACAATAAATCTCTACTGGCACTGGCTCTCGTCAGTACCTTAAGTCTTACCGCCTGCGGGGACGGAAG CGATGGTCAAGATGGGGCACCTGGCACACCAGGTACACCCGGAACACCAGGCACTCCCGGAACACCAGGTACACCCGGAA CCCCTGCGGGCTCCTTCGCAACGACTGCTCAATCTATTACTGATCTGGCTTTCACTTTAAGTCCAGCTGACATTAAAGTG ACCAGCAGTGAAGGCTTCAGCGTTAAATTTACTGTTACCGGAAAAAATGCTAACAAAGATGTTCCTTTTACAGGACTCGA TAAAGTTGCGCTTTATTCTTTAACGGCAAATGAAAATACCTCAGGTACTGGCGCCCCTATTCAATGGCAAAACAATGCCA TGGCGAACGCCGCAGGTACTTCGCTAACTTGTACCTTAGATGGTCTTAACGGTACTAAAAATGCTTGTACTTTAACCGAA GATACAGCAACACCAGGCACTTACACTGCAACTTGGGCACATGATGGCGCAGCGCCAATCATTAATCCCAATGATAATCC AAATGCAGTACACAGAATATTTCTACGTGCTTACAACGTCACTGACAGTGCTGGCGTAGCCTTATCTGACAAGATTTTAT CTGTACCCGTTGACTTTATCCCTGCCACTGATGAACTTGCATCATCAGGTAAAGATACCGTCAGTAGCGCAGCCTGTGAA AAATGTCACGGTGAAGCAGATGGCCATATCGCCAATATTTCAGCCCACCATAACTACCAAGGCGTTAAAAATTGTGTGAC CTGTCATAACCCAGATCAAATCCCAAGTGATGCAGATCTAGCCGCAGGTTTGATATTTGACTTTGCACCTATGATCCACA GGATCCACTCTGGCGCAGAAAACGCAGCAAACTTCGATACTAGCAATAATACCGCTAAAGAATGGAGTGAAATTGGCTTC CCATCTGATCTGAAAGAATGTACGACCTGTCATACTACAGACCAACCTAGCTATAACACTATTTACGCCCAAGCTTGTGT AGGCTGCCATATGACAGTCAACTTTGCGACTGGTGAAAACCACTCTGAATTTGCCCTAGCTCAAGCAGATGATACTCAAT GTAGTTCTTGCCACGGCACAGGTAACTTGTCACCTGCGGTGGTACATAGTGTTGGTAAACGTGCAGAGTATGCATCTCTG TTCAAAGTTGACTTCACCAGTGCTACAACAGTTCCATCAGCTACTCTAGGCATGAAAACCTTAACCTTAACAGCCAATGT CACCTTAAATGGTGCGCCAATTGCTGATGGTACATCGTTAAAAGCCTACAACGCGACCACGAACCCAACAGCGATGTTTG TCGCTAATGGTCTATTGATCGGTAATGTGGCCACTGACGGTACTGTATACTCTTGGAGAGATGTTAAACCTGCAGCAATC AGCCTGAAACTGGAAAACGGTACACTTGCTGGTGGCGTGTTAACTATCGTTAAAGATATCCCAGATGCGCAAGCTGTGGG CACTCTCTACGTAGGTTCAGAAGCCAACTTCTGTGCTAAAGCGGGTAAAGTGGTTAGCTGTAATACTACAAACTTAGAGT TTGGTCCAACTAGCCCTATCGGTAACGAAGCTGCAGTGAAATTCTATAGCCCTGATGGTAGCGCAGTCACTAAAGCCCGT ATGACTGATCCTACTCGTATCACAGTCGCAGAAACTAAGTGTAATGCTTGTCATGGCACCTTAGATTATGCAAAAGGTTC AAGACACGGCGCTTACACCTTCGACCAATGTATGCACTGCCATAACGACACCACAGGCGCTTCTGGCCACGGTGCAACTG GCTATAAAGGCGATGATGGTAAGTTAGTTGTTAATCCTGAAGTGACCTTCAATAACAAAGATCTATTCACAGTTGCTCAC CGTTTCCACAGCGGTAACTTCGGTGTAGTAGAAGGTATCTTCCGCGATGCGAAAGGTGGTTTGTTCGGTTATCCTGCTGT TGAAACAGATTGTGCGGCTTGTCATAAAGACAATGCCAAACTGTTTGCAACTGACGGTGGTTTAACTTCAGGCAAACGCT CAATCAAAGTAGGTGCTTACTACATTAGCCCAGTGGCTGAATCATGCCGTACTTGTCACGCTCACTCTGATGCGGCAGCT GTCGCTCACTTTAGAAGTAACGGTGCGGTAGTAGAAGCGGATGCAATGACAGATCCTAACCTACCAGTAGAATCTTGCGC GACCTGTCATGCTGAAGGAAAAACCTACGGCGTAGATAAGGTACACGCAGAGTAG
Upstream 100 bases:
>100_bases ATATCAGATACAAACTTGCAAATACCACTTTATAAGTAGGTGAATCCTCCTATATTAGAGGCACTGCACACGCAGTCTTA TAGAAAGAAAAAGGGACGCG
Downstream 100 bases:
>100_bases CACAGCAGTACTAGTACCTTTGGGTTGCCCCTGCACAACCCAAACTTCATCTCTGCAACTCATTGGGGACCCTTAGGGTC CCCTTTTTTATTACCGATGA
Product: decaheme cytochrome c
Products: NA
Alternate protein names: Decaheme Cytochrome C MtrF; Decaheme C-Type Cytochrome OmcA/MtrC Family; Lipoprotein Cytochrome C; Deca-Heme C-Type Cytochrome
Number of amino acids: Translated: 764; Mature: 764
Protein sequence:
>764_residues MMKNYNKSLLALALVSTLSLTACGDGSDGQDGAPGTPGTPGTPGTPGTPGTPGTPAGSFATTAQSITDLAFTLSPADIKV TSSEGFSVKFTVTGKNANKDVPFTGLDKVALYSLTANENTSGTGAPIQWQNNAMANAAGTSLTCTLDGLNGTKNACTLTE DTATPGTYTATWAHDGAAPIINPNDNPNAVHRIFLRAYNVTDSAGVALSDKILSVPVDFIPATDELASSGKDTVSSAACE KCHGEADGHIANISAHHNYQGVKNCVTCHNPDQIPSDADLAAGLIFDFAPMIHRIHSGAENAANFDTSNNTAKEWSEIGF PSDLKECTTCHTTDQPSYNTIYAQACVGCHMTVNFATGENHSEFALAQADDTQCSSCHGTGNLSPAVVHSVGKRAEYASL FKVDFTSATTVPSATLGMKTLTLTANVTLNGAPIADGTSLKAYNATTNPTAMFVANGLLIGNVATDGTVYSWRDVKPAAI SLKLENGTLAGGVLTIVKDIPDAQAVGTLYVGSEANFCAKAGKVVSCNTTNLEFGPTSPIGNEAAVKFYSPDGSAVTKAR MTDPTRITVAETKCNACHGTLDYAKGSRHGAYTFDQCMHCHNDTTGASGHGATGYKGDDGKLVVNPEVTFNNKDLFTVAH RFHSGNFGVVEGIFRDAKGGLFGYPAVETDCAACHKDNAKLFATDGGLTSGKRSIKVGAYYISPVAESCRTCHAHSDAAA VAHFRSNGAVVEADAMTDPNLPVESCATCHAEGKTYGVDKVHAE
Sequences:
>Translated_764_residues MMKNYNKSLLALALVSTLSLTACGDGSDGQDGAPGTPGTPGTPGTPGTPGTPGTPAGSFATTAQSITDLAFTLSPADIKV TSSEGFSVKFTVTGKNANKDVPFTGLDKVALYSLTANENTSGTGAPIQWQNNAMANAAGTSLTCTLDGLNGTKNACTLTE DTATPGTYTATWAHDGAAPIINPNDNPNAVHRIFLRAYNVTDSAGVALSDKILSVPVDFIPATDELASSGKDTVSSAACE KCHGEADGHIANISAHHNYQGVKNCVTCHNPDQIPSDADLAAGLIFDFAPMIHRIHSGAENAANFDTSNNTAKEWSEIGF PSDLKECTTCHTTDQPSYNTIYAQACVGCHMTVNFATGENHSEFALAQADDTQCSSCHGTGNLSPAVVHSVGKRAEYASL FKVDFTSATTVPSATLGMKTLTLTANVTLNGAPIADGTSLKAYNATTNPTAMFVANGLLIGNVATDGTVYSWRDVKPAAI SLKLENGTLAGGVLTIVKDIPDAQAVGTLYVGSEANFCAKAGKVVSCNTTNLEFGPTSPIGNEAAVKFYSPDGSAVTKAR MTDPTRITVAETKCNACHGTLDYAKGSRHGAYTFDQCMHCHNDTTGASGHGATGYKGDDGKLVVNPEVTFNNKDLFTVAH RFHSGNFGVVEGIFRDAKGGLFGYPAVETDCAACHKDNAKLFATDGGLTSGKRSIKVGAYYISPVAESCRTCHAHSDAAA VAHFRSNGAVVEADAMTDPNLPVESCATCHAEGKTYGVDKVHAE >Mature_764_residues MMKNYNKSLLALALVSTLSLTACGDGSDGQDGAPGTPGTPGTPGTPGTPGTPGTPAGSFATTAQSITDLAFTLSPADIKV TSSEGFSVKFTVTGKNANKDVPFTGLDKVALYSLTANENTSGTGAPIQWQNNAMANAAGTSLTCTLDGLNGTKNACTLTE DTATPGTYTATWAHDGAAPIINPNDNPNAVHRIFLRAYNVTDSAGVALSDKILSVPVDFIPATDELASSGKDTVSSAACE KCHGEADGHIANISAHHNYQGVKNCVTCHNPDQIPSDADLAAGLIFDFAPMIHRIHSGAENAANFDTSNNTAKEWSEIGF PSDLKECTTCHTTDQPSYNTIYAQACVGCHMTVNFATGENHSEFALAQADDTQCSSCHGTGNLSPAVVHSVGKRAEYASL FKVDFTSATTVPSATLGMKTLTLTANVTLNGAPIADGTSLKAYNATTNPTAMFVANGLLIGNVATDGTVYSWRDVKPAAI SLKLENGTLAGGVLTIVKDIPDAQAVGTLYVGSEANFCAKAGKVVSCNTTNLEFGPTSPIGNEAAVKFYSPDGSAVTKAR MTDPTRITVAETKCNACHGTLDYAKGSRHGAYTFDQCMHCHNDTTGASGHGATGYKGDDGKLVVNPEVTFNNKDLFTVAH RFHSGNFGVVEGIFRDAKGGLFGYPAVETDCAACHKDNAKLFATDGGLTSGKRSIKVGAYYISPVAESCRTCHAHSDAAA VAHFRSNGAVVEADAMTDPNLPVESCATCHAEGKTYGVDKVHAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 79184; Mature: 79184
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00071 GAPDH ; PS51008 MULTIHEME_CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKNYNKSLLALALVSTLSLTACGDGSDGQDGAPGTPGTPGTPGTPGTPGTPGTPAGSFA CCCCCCHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH TTAQSITDLAFTLSPADIKVTSSEGFSVKFTVTGKNANKDVPFTGLDKVALYSLTANENT HHHHHHHEEEEEECCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCC SGTGAPIQWQNNAMANAAGTSLTCTLDGLNGTKNACTLTEDTATPGTYTATWAHDGAAPI CCCCCCEEECCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCEEEEECCCCCCCE INPNDNPNAVHRIFLRAYNVTDSAGVALSDKILSVPVDFIPATDELASSGKDTVSSAACE ECCCCCHHHHHEEEEEEECCCCCCCCEEECCEEECCCCEECCCHHHHCCCCHHHHHHHHH KCHGEADGHIANISAHHNYQGVKNCVTCHNPDQIPSDADLAAGLIFDFAPMIHRIHSGAE HHCCCCCCEEEEEECCCCCCCHHHCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC NAANFDTSNNTAKEWSEIGFPSDLKECTTCHTTDQPSYNTIYAQACVGCHMTVNFATGEN CCCCCCCCCCCHHHHHHCCCCHHHHHHHCCCCCCCCCCCEEEEEEECCEEEEEEEECCCC HSEFALAQADDTQCSSCHGTGNLSPAVVHSVGKRAEYASLFKVDFTSATTVPSATLGMKT CCCEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHCCEEE LTLTANVTLNGAPIADGTSLKAYNATTNPTAMFVANGLLIGNVATDGTVYSWRDVKPAAI EEEEEEEEECCCCCCCCCCEEEEECCCCCEEEEEECCEEEEEEECCCEEEEECCCCCEEE SLKLENGTLAGGVLTIVKDIPDAQAVGTLYVGSEANFCAKAGKVVSCNTTNLEFGPTSPI EEEECCCCCCCHHHEEECCCCCCHHEEEEEECCCCCHHHHCCCEEEECCCCCCCCCCCCC GNEAAVKFYSPDGSAVTKARMTDPTRITVAETKCNACHGTLDYAKGSRHGAYTFDQCMHC CCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCCCCCHHHCCCCCCCCCCHHHHHHH HNDTTGASGHGATGYKGDDGKLVVNPEVTFNNKDLFTVAHRFHSGNFGVVEGIFRDAKGG CCCCCCCCCCCCCCEECCCCEEEECCEEEECCCCEEEEEEHHCCCCCHHHHHHHHHCCCC LFGYPAVETDCAACHKDNAKLFATDGGLTSGKRSIKVGAYYISPVAESCRTCHAHSDAAA EEECCCCCCCHHHHCCCCCEEEEECCCCCCCCCEEEEEEEEECHHHHHHHHHCCCCCHHE VAHFRSNGAVVEADAMTDPNLPVESCATCHAEGKTYGVDKVHAE EEEECCCCCEEEECCCCCCCCCHHHHHHHCCCCCEECCCEECCC >Mature Secondary Structure MMKNYNKSLLALALVSTLSLTACGDGSDGQDGAPGTPGTPGTPGTPGTPGTPGTPAGSFA CCCCCCHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH TTAQSITDLAFTLSPADIKVTSSEGFSVKFTVTGKNANKDVPFTGLDKVALYSLTANENT HHHHHHHEEEEEECCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCC SGTGAPIQWQNNAMANAAGTSLTCTLDGLNGTKNACTLTEDTATPGTYTATWAHDGAAPI CCCCCCEEECCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCEEEEECCCCCCCE INPNDNPNAVHRIFLRAYNVTDSAGVALSDKILSVPVDFIPATDELASSGKDTVSSAACE ECCCCCHHHHHEEEEEEECCCCCCCCEEECCEEECCCCEECCCHHHHCCCCHHHHHHHHH KCHGEADGHIANISAHHNYQGVKNCVTCHNPDQIPSDADLAAGLIFDFAPMIHRIHSGAE HHCCCCCCEEEEEECCCCCCCHHHCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC NAANFDTSNNTAKEWSEIGFPSDLKECTTCHTTDQPSYNTIYAQACVGCHMTVNFATGEN CCCCCCCCCCCHHHHHHCCCCHHHHHHHCCCCCCCCCCCEEEEEEECCEEEEEEEECCCC HSEFALAQADDTQCSSCHGTGNLSPAVVHSVGKRAEYASLFKVDFTSATTVPSATLGMKT CCCEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHCCEEE LTLTANVTLNGAPIADGTSLKAYNATTNPTAMFVANGLLIGNVATDGTVYSWRDVKPAAI EEEEEEEEECCCCCCCCCCEEEEECCCCCEEEEEECCEEEEEEECCCEEEEECCCCCEEE SLKLENGTLAGGVLTIVKDIPDAQAVGTLYVGSEANFCAKAGKVVSCNTTNLEFGPTSPI EEEECCCCCCCHHHEEECCCCCCHHEEEEEECCCCCHHHHCCCEEEECCCCCCCCCCCCC GNEAAVKFYSPDGSAVTKARMTDPTRITVAETKCNACHGTLDYAKGSRHGAYTFDQCMHC CCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCCCCCCCHHHCCCCCCCCCCHHHHHHH HNDTTGASGHGATGYKGDDGKLVVNPEVTFNNKDLFTVAHRFHSGNFGVVEGIFRDAKGG CCCCCCCCCCCCCCEECCCCEEEECCEEEECCCCEEEEEEHHCCCCCHHHHHHHHHCCCC LFGYPAVETDCAACHKDNAKLFATDGGLTSGKRSIKVGAYYISPVAESCRTCHAHSDAAA EEECCCCCCCHHHHCCCCCEEEEECCCCCCCCCEEEEEEEEECHHHHHHHHHCCCCCHHE VAHFRSNGAVVEADAMTDPNLPVESCATCHAEGKTYGVDKVHAE EEEECCCCCEEEECCCCCCCCCHHHHHHHCCCCCEECCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA