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The map label for this gene is ycbC [H]

Identifier: 160874624

GI number: 160874624

Start: 1817359

End: 1818105

Strand: Direct

Name: ycbC [H]

Synonym: Sbal195_1507

Alternate gene names: 160874624

Gene position: 1817359-1818105 (Clockwise)

Preceding gene: 160874623

Following gene: 160874625

Centisome position: 33.99

GC content: 45.78

Gene sequence:

>747_bases
ATGGACATCATGTTTTGGGTTAAGAAAGTTGTTTCACAGGGGATAATGCCGATTCCCTTTATCCTATTGTTATTACTCAT
TTCTATTCTGGTATGGCGCCGTCGGAGCATGGCGAAATACTTAGTATCGTGCGCCTTCTTTGTTTTACTCTTTTTAAGTA
GTCAGCTGGGTGTGAATACCTTAGTGCGCCCATTAGAATCAGCTTACCCCATTAATTCCACACCCATCACAGGCGCTTGT
TTTGTGATGGTATTAGGTTCGGCGCACTCGGATATTCAAGGTGCGACTGCGGTGCAATCCTTGTCTGCAGTAGCGCTTGC
AAGGCTTAGTGAAGGTGTCAGACAACTTAATTTAGGCCAAGAATGTAAGTTGATTGTCAGCGGTTGGGGCGGTGAACTCA
CTCAATTTTCCCATGCTGAAATGATGGCGAAAGCCGCAGTTGAACTGGGCGTTGATAAACGTCGGATCATTCAATTCCCT
TTAGCGCGAGATACGATAGAAGAAGCGCAATATTTACAGTGGGAATTAGGCGAAGAACCTTTTCGCTTAGTCACATCGGC
CACTCATATGCCACGGGCTATGGCTATCTTCACCGCTAAAGGTTTACATCCTGAAGCCGCACCAACGGATTTTATTGGGA
GAGATGATTTTTGGTGGCGTTTGACTGCGGATAATCTAGTGGCCTCTCAGCGGGCGATTCACGAATACATTGGCCGTTTG
TGGTTATGGCTAAAGACCATAAGTTAA

Upstream 100 bases:

>100_bases
TTGTATAAACATTAGCCCAGCAAAATGCTGGGCTAATGTTATCTGCTATGCGTTTCGCCGTATTTTGATGCTATGATTGC
GCTCTTTTGGGTTGCTTGGC

Downstream 100 bases:

>100_bases
AGATCGTAAGTTGAAGGTGTGGTTTGCCGACTTCAATCTAAAGATAGTGAGTGTTAACAGGAAGATGAACAATGACAATT
GAGTCAGAAATAATGTCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MDIMFWVKKVVSQGIMPIPFILLLLLISILVWRRRSMAKYLVSCAFFVLLFLSSQLGVNTLVRPLESAYPINSTPITGAC
FVMVLGSAHSDIQGATAVQSLSAVALARLSEGVRQLNLGQECKLIVSGWGGELTQFSHAEMMAKAAVELGVDKRRIIQFP
LARDTIEEAQYLQWELGEEPFRLVTSATHMPRAMAIFTAKGLHPEAAPTDFIGRDDFWWRLTADNLVASQRAIHEYIGRL
WLWLKTIS

Sequences:

>Translated_248_residues
MDIMFWVKKVVSQGIMPIPFILLLLLISILVWRRRSMAKYLVSCAFFVLLFLSSQLGVNTLVRPLESAYPINSTPITGAC
FVMVLGSAHSDIQGATAVQSLSAVALARLSEGVRQLNLGQECKLIVSGWGGELTQFSHAEMMAKAAVELGVDKRRIIQFP
LARDTIEEAQYLQWELGEEPFRLVTSATHMPRAMAIFTAKGLHPEAAPTDFIGRDDFWWRLTADNLVASQRAIHEYIGRL
WLWLKTIS
>Mature_248_residues
MDIMFWVKKVVSQGIMPIPFILLLLLISILVWRRRSMAKYLVSCAFFVLLFLSSQLGVNTLVRPLESAYPINSTPITGAC
FVMVLGSAHSDIQGATAVQSLSAVALARLSEGVRQLNLGQECKLIVSGWGGELTQFSHAEMMAKAAVELGVDKRRIIQFP
LARDTIEEAQYLQWELGEEPFRLVTSATHMPRAMAIFTAKGLHPEAAPTDFIGRDDFWWRLTADNLVASQRAIHEYIGRL
WLWLKTIS

Specific function: Unknown

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787150, Length=228, Percent_Identity=35.9649122807018, Blast_Score=113, Evalue=9e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003848
- InterPro:   IPR014729 [H]

Pfam domain/function: PF02698 DUF218 [H]

EC number: NA

Molecular weight: Translated: 27763; Mature: 27763

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIMFWVKKVVSQGIMPIPFILLLLLISILVWRRRSMAKYLVSCAFFVLLFLSSQLGVNT
CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
LVRPLESAYPINSTPITGACFVMVLGSAHSDIQGATAVQSLSAVALARLSEGVRQLNLGQ
HHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ECKLIVSGWGGELTQFSHAEMMAKAAVELGVDKRRIIQFPLARDTIEEAQYLQWELGEEP
CCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCH
FRLVTSATHMPRAMAIFTAKGLHPEAAPTDFIGRDDFWWRLTADNLVASQRAIHEYIGRL
HHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHH
WLWLKTIS
HHHHHHCC
>Mature Secondary Structure
MDIMFWVKKVVSQGIMPIPFILLLLLISILVWRRRSMAKYLVSCAFFVLLFLSSQLGVNT
CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
LVRPLESAYPINSTPITGACFVMVLGSAHSDIQGATAVQSLSAVALARLSEGVRQLNLGQ
HHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ECKLIVSGWGGELTQFSHAEMMAKAAVELGVDKRRIIQFPLARDTIEEAQYLQWELGEEP
CCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCH
FRLVTSATHMPRAMAIFTAKGLHPEAAPTDFIGRDDFWWRLTADNLVASQRAIHEYIGRL
HHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHH
WLWLKTIS
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]