| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is cdsA [H]
Identifier: 160874603
GI number: 160874603
Start: 1787600
End: 1788472
Strand: Direct
Name: cdsA [H]
Synonym: Sbal195_1486
Alternate gene names: 160874603
Gene position: 1787600-1788472 (Clockwise)
Preceding gene: 160874602
Following gene: 160874604
Centisome position: 33.43
GC content: 46.28
Gene sequence:
>873_bases ATGAGGGATTTTTTTTTGCTAAAACAACGAATAATAACAGCAATTTGGTTAGTTCCATTAGTTTTGGGGGCGATATTTTT ACTCCCTGCCAACTACTTCGCTTGGGCCTTGGTCGGCGTCTTTCTCATTGCTGCAAAGGAATGGGGAAGAATTATCGATA ATCAGTGTGACGTTACCCAGTGGAGCTTCACTTGTACGGTCGGTATCTTGTTGGTGGCACTTAATCTGATAGTGCCAATC GATGCAGTTTGGTTAAGCCATCAGTTACACCCTATTTATTTAGCCATTCTCTACATTGGCGCACTTTGGTGGTTAGCCTC ACTGTTATTAGTGGTGACTTATCCTAAAAGCGCTAAGTTCTGGCAAAAGAATCCTATGTTTAAGTCCATGTTTGGACAGC TAACCTTAATACCTTGCTTTGTCGCCCTGATCGCGCTCAAATCCATTAGCTCGCAAGCTTCGCCTTATTACGGCCCTGTG TTGGTGTTATTGGTGATGTTGATTGTGTGGGCCGCGGATTCAGGCGCTTACTTCGTTGGCAAGGCGATAGGTAAAACTAA ACTGATGCCAGCGGTAAGCCCAGCTAAAACGCTTGAAGGTTTACTCGGCGGTTTAGTGACCACTATGATAGTGGTTGGTG CGGTGATGTATTATTCGCCTGAGCAAGAACTGGGCTTAGTTGTGGCCGTGACCTTATTTGTTGCCTTAGTGTCAGCACTG GGTGATTTATCTGAAAGTATGTTTAAGCGTGCGGCCTGTATCAAAGATTCTGGCACCATTTTGCCAGGTCACGGCGGCGT GCTCGACCGCATCGACAGCCTGACAGCAGCCTTGCCGGTGTTTACCCTGATCTACATTGCATTCTGGATGTAA
Upstream 100 bases:
>100_bases ACAGGCTTTTCATGAAGCGATTGCCATTTTTGCAAGTCGCCAGCGCCGCTTTGGTTTGACTGGAAGTCAGATTGATGAGA TGCGTGCATTGTAAAACCTC
Downstream 100 bases:
>100_bases CGCTATGCAAAATATGGTGATTTTGGGTGCTACCGGCTCTATAGGTGCCAGTACCTTAAGTGTGATCTCGGCTAATCCAT TTGCTTATAGCGTGTATGGA
Product: phosphatidate cytidylyltransferase
Products: NA
Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MRDFFLLKQRIITAIWLVPLVLGAIFLLPANYFAWALVGVFLIAAKEWGRIIDNQCDVTQWSFTCTVGILLVALNLIVPI DAVWLSHQLHPIYLAILYIGALWWLASLLLVVTYPKSAKFWQKNPMFKSMFGQLTLIPCFVALIALKSISSQASPYYGPV LVLLVMLIVWAADSGAYFVGKAIGKTKLMPAVSPAKTLEGLLGGLVTTMIVVGAVMYYSPEQELGLVVAVTLFVALVSAL GDLSESMFKRAACIKDSGTILPGHGGVLDRIDSLTAALPVFTLIYIAFWM
Sequences:
>Translated_290_residues MRDFFLLKQRIITAIWLVPLVLGAIFLLPANYFAWALVGVFLIAAKEWGRIIDNQCDVTQWSFTCTVGILLVALNLIVPI DAVWLSHQLHPIYLAILYIGALWWLASLLLVVTYPKSAKFWQKNPMFKSMFGQLTLIPCFVALIALKSISSQASPYYGPV LVLLVMLIVWAADSGAYFVGKAIGKTKLMPAVSPAKTLEGLLGGLVTTMIVVGAVMYYSPEQELGLVVAVTLFVALVSAL GDLSESMFKRAACIKDSGTILPGHGGVLDRIDSLTAALPVFTLIYIAFWM >Mature_290_residues MRDFFLLKQRIITAIWLVPLVLGAIFLLPANYFAWALVGVFLIAAKEWGRIIDNQCDVTQWSFTCTVGILLVALNLIVPI DAVWLSHQLHPIYLAILYIGALWWLASLLLVVTYPKSAKFWQKNPMFKSMFGQLTLIPCFVALIALKSISSQASPYYGPV LVLLVMLIVWAADSGAYFVGKAIGKTKLMPAVSPAKTLEGLLGGLVTTMIVVGAVMYYSPEQELGLVVAVTLFVALVSAL GDLSESMFKRAACIKDSGTILPGHGGVLDRIDSLTAALPVFTLIYIAFWM
Specific function: Phospholipid biosynthesis. [C]
COG id: COG0575
COG function: function code I; CDP-diglyceride synthetase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDS family [H]
Homologues:
Organism=Escherichia coli, GI87081696, Length=278, Percent_Identity=41.726618705036, Blast_Score=192, Evalue=3e-50, Organism=Escherichia coli, GI1787677, Length=114, Percent_Identity=44.7368421052632, Blast_Score=93, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000374 [H]
Pfam domain/function: PF01148 CTP_transf_1 [H]
EC number: =2.7.7.41 [H]
Molecular weight: Translated: 31731; Mature: 31731
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: PS01315 CDS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDFFLLKQRIITAIWLVPLVLGAIFLLPANYFAWALVGVFLIAAKEWGRIIDNQCDVTQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH WSFTCTVGILLVALNLIVPIDAVWLSHQLHPIYLAILYIGALWWLASLLLVVTYPKSAKF HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH WQKNPMFKSMFGQLTLIPCFVALIALKSISSQASPYYGPVLVLLVMLIVWAADSGAYFVG HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHH KAIGKTKLMPAVSPAKTLEGLLGGLVTTMIVVGAVMYYSPEQELGLVVAVTLFVALVSAL HHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH GDLSESMFKRAACIKDSGTILPGHGGVLDRIDSLTAALPVFTLIYIAFWM HHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MRDFFLLKQRIITAIWLVPLVLGAIFLLPANYFAWALVGVFLIAAKEWGRIIDNQCDVTQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH WSFTCTVGILLVALNLIVPIDAVWLSHQLHPIYLAILYIGALWWLASLLLVVTYPKSAKF HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH WQKNPMFKSMFGQLTLIPCFVALIALKSISSQASPYYGPVLVLLVMLIVWAADSGAYFVG HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHH KAIGKTKLMPAVSPAKTLEGLLGGLVTTMIVVGAVMYYSPEQELGLVVAVTLFVALVSAL HHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH GDLSESMFKRAACIKDSGTILPGHGGVLDRIDSLTAALPVFTLIYIAFWM HHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]